RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 WNK3Q9BYP7 1800 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 A0A087WWL8 130 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 TRAV3A0A0B4J244 114 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 CCL25O15444 150 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 C1QCP02747 245 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 UBE2E1P51965 193 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 TMEM219Q86XT9 240 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 DYNAPQ8N1N2 210 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 TIMM17AQ99595 171 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 LOC101059948A0A1B0GTJ6 334 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 FAM236DA0A1B0GTK5 79 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 PSPNO60542 156 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 LTAP01374 205 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 CELA2AP08217 269 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 FAM236CP0DP71 79 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 RGPD3A6NKT7 1758 aaPredicted RBP4.38□□□□□ -1.71
XRN1-201ENST00000264951 IGHV3OR16-8A0A075B7F1 116 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 MED14OSP0DP75 135 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 RBBP6Q7Z6E9 1792 aaKnown RBP4.38□□□□□ -1.71
XRN1-201ENST00000264951 H3BRN7 92 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 TMEM200BQ69YZ2 307 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 FOXL2NBQ6ZUU3 175 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.38□□□□□ -1.71
XRN1-201ENST00000264951 FAM27E3Q08E93 113 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 Q6P435 159 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 LYZL4Q96KX0 146 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 RALGAPA2Q2PPJ7 1873 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 UTRNP46939 3433 aa4.38□□□□□ -1.71
XRN1-201ENST00000264951 TINCRA0A1B0GVN0 87 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 CLPSL1A2RUU4 121 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 IGFBP6P24592 240 aaPredicted RBP4.37□□□□□ -1.71
XRN1-201ENST00000264951 PNRC2Q9NPJ4 139 aaKnown RBP4.37□□□□□ -1.71
XRN1-201ENST00000264951 CRYGBP07316 175 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 ELANEP08246 267 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 FOXE3Q13461 319 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 NOTCH2Q04721 2471 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 TRBV12-3P01733 135 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 RFPL3SP0C7P2 107 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 MST1LQ2TV78 715 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 LINC01560Q8TB33 94 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 U3KQE9 123 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 IGKV1D-8A0A087WSZ0 117 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 IGHV1-58A0A0C4DH39 117 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 CD59P13987 128 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 MST1P26927 711 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 ZNF672Q499Z4 452 aaPredicted RBP4.37□□□□□ -1.71
XRN1-201ENST00000264951 Q9H8V8 135 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 SND1-IT1Q9HBX3 110 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 C14orf132Q9NPU4 83 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 PRRC2AP48634 2157 aaKnown RBP4.37□□□□□ -1.71
XRN1-201ENST00000264951 C4orf51C9J302 202 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 NDUFV3P56181 108 aaKnown RBP4.37□□□□□ -1.71
XRN1-201ENST00000264951 SPATA12Q7Z6I5 190 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 GFI1Q99684 422 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 SCN10AQ9Y5Y9 1956 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 IGKV1D-43A0A0B4J1Z2 117 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 G3V4G9 280 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 CCDC168Q8NDH2 2452 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 IGKV1-12A0A0C4DH73 117 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 IGKV1D-12P01611 117 aa4.37□□□□□ -1.71
XRN1-201ENST00000264951 IGHV1-18A0A0C4DH31 117 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 A0A0J9YXY3 114 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 LYPD3O95274 346 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 F5H768 121 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 PLXNB2O15031 1838 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 PARP14Q460N5 1801 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 DEFB130BP0DP73 79 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 DEFB130AP0DP74 79 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 LINC01356Q8N9X3 169 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 PRR14LQ5THK1 2151 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 SMKR1H3BMG3 65 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 TM2D2Q9BX73 214 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 LINC01619G3V211 115 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 LHBP01229 141 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 AMTNQ6UX39 209 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 C9orf106Q8NAJ2 232 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 COL4A5P29400 1685 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 IGHV3-73A0A0B4J1V6 119 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 LINC00473A8K010 186 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 USP17L23D6RBM5 183 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 KLHL30-AS1Q8NEE0 82 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 TET1Q8NFU7 2136 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 DYSFO75923 2080 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 TMEM213A2RRL7 107 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 H3BUX3 64 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.36□□□□□ -1.71
XRN1-201ENST00000264951 ZNF833PQ6ZTB9 187 aa4.36□□□□□ -1.71
XRN1-201ENST00000264951 MSRB2Q9Y3D2 182 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 OVOL3O00110 214 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 C4orf48Q5BLP8 95 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 SPTSSBQ8NFR3 76 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 ZNRF2Q8NHG8 242 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 IGHV1-69P01742 117 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 BUB3O43684 328 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 C11orf86A6NJI1 115 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 LGALS9O00182 355 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 E9PLD3 99 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 NDUFA1O15239 70 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 VOPP1Q96AW1 172 aa4.35□□□□□ -1.71
XRN1-201ENST00000264951 LINC00479Q96M42 142 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms