RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ATRAIDQ6UW56 229 aa7.17□□□□□ -1.26
SNRNP40-201ENST00000263694 GTSCR1Q86UQ5 136 aa7.17□□□□□ -1.26
SNRNP40-201ENST00000263694 STHQ8IWL8 128 aa7.17□□□□□ -1.26
SNRNP40-201ENST00000263694 TMEM183AQ8IXX5 376 aa7.17□□□□□ -1.26
SNRNP40-201ENST00000263694 FAM19A4Q96LR4 140 aa7.17□□□□□ -1.26
SNRNP40-201ENST00000263694 PPP1R14DQ9NXH3 145 aa7.17□□□□□ -1.26
SNRNP40-201ENST00000263694 ZFP30Q9Y2G7 519 aa7.17□□□□□ -1.26
SNRNP40-201ENST00000263694 DUSP14O95147 198 aaKnown RBP7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 RNASE4P34096 147 aaKnown RBP7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 CMC4P56277 68 aaPredicted RBP7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 EGFEM1PQ0D2K5 195 aa7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 ZFAND2AQ8N6M9 145 aa7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 RNASE7Q9H1E1 156 aaKnown RBP7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 PGPEP1Q9NXJ5 209 aa7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 DNAH3Q8TD57 4116 aa7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 GCGP01275 180 aa7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 GPX1P07203 203 aa7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 BTN1A1Q13410 526 aa7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 SAPCD1Q5SSQ6 148 aa7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 TRPT1Q86TN4 253 aaKnown RBP7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 CLRN3Q8NCR9 226 aa7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 ISOC2Q96AB3 205 aa7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 FAM110AQ9BQ89 295 aa7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 NDFIP1Q9BT67 221 aa7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 SRD5A3Q9H8P0 318 aa7.16□□□□□ -1.26
SNRNP40-201ENST00000263694 FBLL1A6NHQ2 334 aaKnown RBP7.15□□□□□ -1.27
SNRNP40-201ENST00000263694 A8MTW9 85 aa7.15□□□□□ -1.27
SNRNP40-201ENST00000263694 SMUG1Q53HV7 270 aa7.15□□□□□ -1.27
SNRNP40-201ENST00000263694 LY96Q9Y6Y9 160 aa7.15□□□□□ -1.27
SNRNP40-201ENST00000263694 TRAV12-3A0A0B4J271 114 aa7.14□□□□□ -1.27
SNRNP40-201ENST00000263694 C7orf77A4D0Y5 90 aa7.14□□□□□ -1.27
SNRNP40-201ENST00000263694 SH2D1AO60880 128 aa7.14□□□□□ -1.27
SNRNP40-201ENST00000263694 CRISP2P16562 243 aa7.14□□□□□ -1.27
SNRNP40-201ENST00000263694 RNF212Q495C1 297 aa7.14□□□□□ -1.27
SNRNP40-201ENST00000263694 GFI1BQ5VTD9 330 aa7.14□□□□□ -1.27
SNRNP40-201ENST00000263694 SVBPQ8N300 66 aa7.14□□□□□ -1.27
SNRNP40-201ENST00000263694 NUDT10Q8NFP7 164 aa7.14□□□□□ -1.27
SNRNP40-201ENST00000263694 NUDT11Q96G61 164 aa7.14□□□□□ -1.27
SNRNP40-201ENST00000263694 C11orf21Q9P2W6 132 aa7.14□□□□□ -1.27
SNRNP40-201ENST00000263694 XCL2Q9UBD3 114 aa7.14□□□□□ -1.27
SNRNP40-201ENST00000263694 KLLNB2CW77 178 aa7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 CRXO43186 299 aaPredicted RBP7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 SCO1O75880 301 aa7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 PRM2P04554 102 aa7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 GIG44P09565 113 aaPredicted RBP7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 RBMY1A1P0DJD3 496 aaKnown RBP7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 RBMY1CP0DJD4 496 aa7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 S100A1P23297 94 aa7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 LEPP41159 167 aa7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 CDKN1BP46527 198 aa7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 ERVFC1-1P60608 527 aa7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 RPL19P84098 196 aaKnown RBP7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 RBMY1FQ15415 496 aaKnown RBP7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 COX8CQ7Z4L0 72 aa7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 SFRP2Q96HF1 295 aa7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 RPS10P5Q9NQ39 176 aa7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 LENEPQ9Y5L5 61 aa7.13□□□□□ -1.27
SNRNP40-201ENST00000263694 TMSB15BA0A087X1C1 80 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 C7orf71A4D174 169 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 C19orf71A6NCJ1 209 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 SNAPINO95295 136 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 CA1P00915 261 aaPredicted RBP7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 IGHV4-30-4P0DP06 118 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 PNRC1Q12796 327 aaPredicted RBP7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 MUC21Q5SSG8 566 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 IBA57Q5T440 356 aaKnown RBP7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 FAM162BQ5T6X4 162 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 Q8N3U1 123 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 SMIM12Q96EX1 92 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 ODF3Q96PU9 254 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 TUBA4BQ9H853 241 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 TRBV7-9A0A0J9YWB2 115 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 FABP5P3A8MUU1 101 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 ZNF324O75467 553 aaPredicted RBP7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 ORM1P02763 201 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 GZMBP10144 247 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 TSPOP30536 169 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 ZNF575Q86XF7 245 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 OR10G8Q8NGN5 311 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 DAZAP1Q96EP5 407 aaKnown RBP7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 CLUHP3Q96NS8 147 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 NAGKQ9UJ70 344 aa7.12□□□□□ -1.27
SNRNP40-201ENST00000263694 NBEAL2Q6ZNJ1 2754 aa7.11□□□□□ -1.27
SNRNP40-201ENST00000263694 IGKV3D-20A0A0C4DH25 116 aa7.11□□□□□ -1.27
SNRNP40-201ENST00000263694 ZNF705GA8MUZ8 300 aaPredicted RBP7.11□□□□□ -1.27
SNRNP40-201ENST00000263694 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.11□□□□□ -1.27
SNRNP40-201ENST00000263694 GATCO43716 136 aaKnown RBP7.11□□□□□ -1.27
SNRNP40-201ENST00000263694 P01737 135 aa7.11□□□□□ -1.27
SNRNP40-201ENST00000263694 PFN1P07737 140 aaKnown RBP7.11□□□□□ -1.27
SNRNP40-201ENST00000263694 Q6AWC8 147 aa7.11□□□□□ -1.27
SNRNP40-201ENST00000263694 OR2D3Q8NGH3 330 aa7.11□□□□□ -1.27
SNRNP40-201ENST00000263694 KRTAP9-2Q9BYQ4 174 aa7.11□□□□□ -1.27
SNRNP40-201ENST00000263694 OSTCQ9NRP0 149 aa7.11□□□□□ -1.27
SNRNP40-201ENST00000263694 V9GYV3 84 aa7.11□□□□□ -1.27
SNRNP40-201ENST00000263694 DNHD1Q96M86 4753 aa7.1□□□□□ -1.27
SNRNP40-201ENST00000263694 IGHV3OR16-12A0A075B7B8 117 aa7.1□□□□□ -1.27
SNRNP40-201ENST00000263694 LOC102724200A0A096LPH7 203 aaPredicted RBP7.1□□□□□ -1.27
SNRNP40-201ENST00000263694 TRAV21A0A0B4J279 112 aa7.1□□□□□ -1.27
SNRNP40-201ENST00000263694 GRIFINA4D1Z8 144 aa7.1□□□□□ -1.27
SNRNP40-201ENST00000263694 GNRH2O43555 120 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms