RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 MBD3L4A6NDZ8 208 aaPredicted RBP9.57□□□□□ -0.88
SMG6-201ENST00000263073 MBD3L3A6NE82 208 aaPredicted RBP9.57□□□□□ -0.88
SMG6-201ENST00000263073 MBD3L5A6NJ08 208 aaPredicted RBP9.57□□□□□ -0.88
SMG6-201ENST00000263073 MBD3L2Q8NHZ7 208 aaPredicted RBP9.57□□□□□ -0.88
SMG6-201ENST00000263073 PSCAO43653 123 aa9.57□□□□□ -0.88
SMG6-201ENST00000263073 SCRT2Q9NQ03 307 aa9.57□□□□□ -0.88
SMG6-201ENST00000263073 J3QQQ9 107 aa9.57□□□□□ -0.88
SMG6-201ENST00000263073 CRLF1O75462 422 aa9.57□□□□□ -0.88
SMG6-201ENST00000263073 OVOL2Q9BRP0 275 aa9.57□□□□□ -0.88
SMG6-201ENST00000263073 MGAMO43451 1857 aa9.57□□□□□ -0.88
SMG6-201ENST00000263073 EGR2P11161 476 aaPredicted RBP9.56□□□□□ -0.88
SMG6-201ENST00000263073 SPRNQ5BIV9 151 aa9.56□□□□□ -0.88
SMG6-201ENST00000263073 FAM231DQ6ZW35 169 aa9.56□□□□□ -0.88
SMG6-201ENST00000263073 SSC4DQ8WTU2 575 aa9.56□□□□□ -0.88
SMG6-201ENST00000263073 FRMD6-AS1P0C7T7 363 aa9.56□□□□□ -0.88
SMG6-201ENST00000263073 LMO1P25800 156 aa9.56□□□□□ -0.88
SMG6-201ENST00000263073 DYNAPQ8N1N2 210 aa9.56□□□□□ -0.88
SMG6-201ENST00000263073 ZNF747Q9BV97 191 aa9.56□□□□□ -0.88
SMG6-201ENST00000263073 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.56□□□□□ -0.88
SMG6-201ENST00000263073 IGKV2-29A2NJV5 120 aaPredicted RBP9.56□□□□□ -0.88
SMG6-201ENST00000263073 F8VRH5 84 aa9.56□□□□□ -0.88
SMG6-201ENST00000263073 SMIM2Q9BVW6 85 aa9.56□□□□□ -0.88
SMG6-201ENST00000263073 ROS1P08922 2347 aa9.56□□□□□ -0.88
SMG6-201ENST00000263073 THSD7BQ9C0I4 1608 aa9.55□□□□□ -0.88
SMG6-201ENST00000263073 IGHV4-4A0A075B6R2 117 aa9.55□□□□□ -0.88
SMG6-201ENST00000263073 LTAP01374 205 aa9.55□□□□□ -0.88
SMG6-201ENST00000263073 FAM110DQ8TAY7 271 aaPredicted RBP9.55□□□□□ -0.88
SMG6-201ENST00000263073 IGHV1OR15-1A0A075B7D0 117 aa9.55□□□□□ -0.88
SMG6-201ENST00000263073 RPL32P62910 135 aaKnown RBP9.55□□□□□ -0.88
SMG6-201ENST00000263073 CDKN1BP46527 198 aa9.55□□□□□ -0.88
SMG6-201ENST00000263073 PRSS29PA6NIE9 313 aa9.54□□□□□ -0.88
SMG6-201ENST00000263073 B4DSR2 109 aa9.54□□□□□ -0.88
SMG6-201ENST00000263073 RPL39LQ96EH5 51 aaKnown RBP9.54□□□□□ -0.88
SMG6-201ENST00000263073 F5H768 121 aa9.54□□□□□ -0.88
SMG6-201ENST00000263073 LOXP28300 417 aaPredicted RBP9.54□□□□□ -0.88
SMG6-201ENST00000263073 OOSP1A8MZH6 123 aa9.54□□□□□ -0.88
SMG6-201ENST00000263073 ANKRD29Q8N6D5 301 aa9.54□□□□□ -0.88
SMG6-201ENST00000263073 DOCK7Q96N67 2140 aa9.54□□□□□ -0.88
SMG6-201ENST00000263073 TRBV25-1A0A075B6N4 114 aa9.54□□□□□ -0.88
SMG6-201ENST00000263073 KIR2DL5BA0A0G2JN68 375 aa9.54□□□□□ -0.88
SMG6-201ENST00000263073 KIR2DL5BA0A0G2JPC4 375 aa9.54□□□□□ -0.88
SMG6-201ENST00000263073 IL15RAQ13261 267 aa9.54□□□□□ -0.88
SMG6-201ENST00000263073 ANKRD39Q53RE8 183 aa9.54□□□□□ -0.88
SMG6-201ENST00000263073 KIR2DL5AQ8N109 375 aa9.54□□□□□ -0.88
SMG6-201ENST00000263073 RNF223E7ERA6 249 aa9.54□□□□□ -0.88
SMG6-201ENST00000263073 MSRB1Q9NZV6 116 aa9.54□□□□□ -0.88
SMG6-201ENST00000263073 SPTBN1Q01082 2364 aaKnown RBP9.54□□□□□ -0.88
SMG6-201ENST00000263073 IGLC1P0CG04 106 aa9.53□□□□□ -0.88
SMG6-201ENST00000263073 ZSWIM8A7E2V4 1837 aa9.53□□□□□ -0.88
SMG6-201ENST00000263073 CRYGCP07315 174 aa9.53□□□□□ -0.88
SMG6-201ENST00000263073 RITA1Q96K30 269 aa9.53□□□□□ -0.88
SMG6-201ENST00000263073 KMT2EQ8IZD2 1858 aa9.53□□□□□ -0.88
SMG6-201ENST00000263073 INAFM2P0DMQ5 153 aa9.53□□□□□ -0.88
SMG6-201ENST00000263073 WIPF2Q8TF74 440 aaPredicted RBP9.53□□□□□ -0.88
SMG6-201ENST00000263073 UBL5Q9BZL1 73 aa9.53□□□□□ -0.88
SMG6-201ENST00000263073 DEFB105AQ8NG35 78 aa9.53□□□□□ -0.88
SMG6-201ENST00000263073 IGLV3-9A0A075B6K5 115 aa9.53□□□□□ -0.88
SMG6-201ENST00000263073 RBMY1FQ15415 496 aaKnown RBP9.53□□□□□ -0.88
SMG6-201ENST00000263073 LYPD6BQ8NI32 183 aa9.53□□□□□ -0.88
SMG6-201ENST00000263073 SPTBN2O15020 2390 aa9.53□□□□□ -0.88
SMG6-201ENST00000263073 ZNF561-AS1K7EIQ3 104 aa9.52□□□□□ -0.88
SMG6-201ENST00000263073 IGHG4P01861 327 aa9.52□□□□□ -0.88
SMG6-201ENST00000263073 CHD3Q12873 2000 aaKnown RBP9.52□□□□□ -0.88
SMG6-201ENST00000263073 PLXNA3P51805 1871 aa9.52□□□□□ -0.89
SMG6-201ENST00000263073 IGHG3P01860 377 aa9.52□□□□□ -0.89
SMG6-201ENST00000263073 HOXD3P31249 432 aaPredicted RBP9.52□□□□□ -0.89
SMG6-201ENST00000263073 PRR20EP86478 221 aa9.52□□□□□ -0.89
SMG6-201ENST00000263073 PRR20CP86479 221 aa9.52□□□□□ -0.89
SMG6-201ENST00000263073 PRR20DP86480 221 aa9.52□□□□□ -0.89
SMG6-201ENST00000263073 PRR20BP86481 221 aa9.52□□□□□ -0.89
SMG6-201ENST00000263073 PRR20AP86496 221 aa9.52□□□□□ -0.89
SMG6-201ENST00000263073 SMIM20Q8N5G0 67 aa9.52□□□□□ -0.89
SMG6-201ENST00000263073 DEFB125Q8N687 156 aa9.52□□□□□ -0.89
SMG6-201ENST00000263073 DAND5Q8N907 189 aa9.52□□□□□ -0.89
SMG6-201ENST00000263073 C11orf52Q96A22 123 aa9.52□□□□□ -0.89
SMG6-201ENST00000263073 WFDC2Q14508 124 aa9.52□□□□□ -0.89
SMG6-201ENST00000263073 ABCA1O95477 2261 aa9.51□□□□□ -0.89
SMG6-201ENST00000263073 BOD1L2Q8IYS8 172 aa9.51□□□□□ -0.89
SMG6-201ENST00000263073 TCTEX1D4Q5JR98 221 aa9.51□□□□□ -0.89
SMG6-201ENST00000263073 EP400Q96L91 3159 aa9.51□□□□□ -0.89
SMG6-201ENST00000263073 TMEM14CQ9P0S9 112 aa9.51□□□□□ -0.89
SMG6-201ENST00000263073 Q71RC1 249 aaPredicted RBP9.51□□□□□ -0.89
SMG6-201ENST00000263073 ZNF491Q8N8L2 437 aa9.51□□□□□ -0.89
SMG6-201ENST00000263073 THAP8Q8NA92 274 aa9.51□□□□□ -0.89
SMG6-201ENST00000263073 FGF23Q9GZV9 251 aaPredicted RBP9.51□□□□□ -0.89
SMG6-201ENST00000263073 RLFQ13129 1914 aa9.5□□□□□ -0.89
SMG6-201ENST00000263073 IGLL5B9A064 214 aa9.5□□□□□ -0.89
SMG6-201ENST00000263073 hADV29S1A0JD25 119 aa9.5□□□□□ -0.89
SMG6-201ENST00000263073 CFC1BP0CG36 223 aa9.5□□□□□ -0.89
SMG6-201ENST00000263073 CFC1P0CG37 223 aa9.5□□□□□ -0.89
SMG6-201ENST00000263073 XCL1P47992 114 aa9.5□□□□□ -0.89
SMG6-201ENST00000263073 TMEM243Q9BU79 118 aa9.5□□□□□ -0.89
SMG6-201ENST00000263073 KLF5Q13887 457 aaPredicted RBP9.5□□□□□ -0.89
SMG6-201ENST00000263073 IGHV2-70DA0A0C4DH43 119 aa9.5□□□□□ -0.89
SMG6-201ENST00000263073 SHISA9B4DS77 424 aa9.5□□□□□ -0.89
SMG6-201ENST00000263073 FXYD2P54710 66 aa9.5□□□□□ -0.89
SMG6-201ENST00000263073 DSCR8Q96T75 97 aa9.5□□□□□ -0.89
SMG6-201ENST00000263073 IGKV3D-7A0A0C4DH55 119 aa9.5□□□□□ -0.89
SMG6-201ENST00000263073 BAALC-AS2P0C853 105 aa9.5□□□□□ -0.89
SMG6-201ENST00000263073 CSRP1P21291 193 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms