RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 OR5C1Q8NGR4 320 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 FAM213BQ8TBF2 198 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 MYOZ3Q8TDC0 251 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 LSM10Q969L4 123 aaKnown RBP2.52□□□□□ -2.01
CCDC54-201ENST00000261058 AMELYQ99218 206 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 C8orf17Q9NRJ1 99 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 ZNF835Q9Y2P0 537 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 SVILO95425 2214 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 UNC13BO14795 1591 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 GLI2P10070 1586 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 PPRC1Q5VV67 1664 aaKnown RBP2.52□□□□□ -2.01
CCDC54-201ENST00000261058 SUPT6HQ7KZ85 1726 aaKnown RBP2.52□□□□□ -2.01
CCDC54-201ENST00000261058 STRCQ7RTU9 1775 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 CCDC88CQ9P219 2028 aa2.52□□□□□ -2.01
CCDC54-201ENST00000261058 MYO18AQ92614 2054 aaKnown RBP2.52□□□□□ -2.01
CCDC54-201ENST00000261058 C9JCJ5 164 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 ATOX1O00244 68 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 HLA-DQA1P01909 254 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 SMIM13P0DJ93 91 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 CSN1S1P47710 185 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 ZNF80P51504 273 aaPredicted RBP2.51□□□□□ -2.01
CCDC54-201ENST00000261058 SNRPD3P62318 126 aaKnown RBP2.51□□□□□ -2.01
CCDC54-201ENST00000261058 IGFBP7Q16270 282 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 MPV17LQ2QL34 196 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 RNASE13Q5GAN3 156 aaKnown RBP2.51□□□□□ -2.01
CCDC54-201ENST00000261058 FAM104BQ5XKR9 115 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 AMN1Q8IY45 258 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 MORN4Q8NDC4 146 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 H1FXQ92522 213 aaKnown RBP2.51□□□□□ -2.01
CCDC54-201ENST00000261058 MGST2Q99735 147 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 B9D2Q9BPU9 175 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 DPH3P1Q9H4G8 78 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 ZNF286AQ9HBT8 521 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 C1orf167Q5SNV9 1468 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 PXDNQ92626 1479 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 ABCC1P33527 1531 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 CEP170BQ9Y4F5 1589 aaPredicted RBP2.51□□□□□ -2.01
CCDC54-201ENST00000261058 LAMC3Q9Y6N6 1575 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.51□□□□□ -2.01
CCDC54-201ENST00000261058 ANK1P16157 1881 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 FER1L6Q2WGJ9 1857 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 NLRC5Q86WI3 1866 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 ANKRD31Q8N7Z5 1873 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 DOCK4Q8N1I0 1966 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 IFT172Q9UG01 1749 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 KIAA0556O60303 1618 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 ADCY10Q96PN6 1610 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 IGHV3-43A0A0B4J1X8 118 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 TMEM223A0PJW6 202 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 C19orf84I3L1E1 186 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 TMEM256-PLSCR3K7ERE1 68 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 OR1I1O60431 355 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 TCL1BO95988 128 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 IGKCP01834 107 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 COL8A2P25067 703 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 ATP5EP56381 51 aaPredicted RBP2.51□□□□□ -2.01
CCDC54-201ENST00000261058 UBE2BP63146 152 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 CCL20P78556 96 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 FAM78AQ5JUQ0 283 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 ZNF678Q5SXM1 525 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 LAIR2Q6ISS4 152 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 GPHB5Q86YW7 130 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 SBSPONQ8IVN8 264 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 STAG3L4Q8TBR4 150 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 DSCR8Q96T75 97 aa2.51□□□□□ -2.01
CCDC54-201ENST00000261058 LSM2Q9Y333 95 aaKnown RBP2.51□□□□□ -2.01
CCDC54-201ENST00000261058 ATG2BQ96BY7 2078 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 ALPK3Q96L96 1907 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 KIF26AQ9ULI4 1882 aaPredicted RBP2.5□□□□□ -2.01
CCDC54-201ENST00000261058 UBE2L5PA0A1B0GUS4 154 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 HBDP02042 147 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 APCSP02743 223 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 PTHLHP12272 177 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 S100A4P26447 101 aaKnown RBP2.5□□□□□ -2.01
CCDC54-201ENST00000261058 MPV17P39210 176 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 SSR2P43308 183 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 UBE2L3P68036 154 aaKnown RBP2.5□□□□□ -2.01
CCDC54-201ENST00000261058 CCL8P80075 99 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 PSMG4Q5JS54 123 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 TMEM136Q6ZRR5 245 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 SPATA12Q7Z6I5 190 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 ZNF101Q8IZC7 436 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 OR5AS1Q8N127 324 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 C3orf56Q8N813 242 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 OR8B3Q8NGG8 313 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 C10orf105Q8TEF2 133 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 ANKRD12Q6UB98 2062 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 EML6Q6ZMW3 1958 aa2.5□□□□□ -2.01
CCDC54-201ENST00000261058 TUBGCP6Q96RT7 1819 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 KIAA1671Q9BY89 1806 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 ZNF142P52746 1687 aaPredicted RBP2.49□□□□□ -2.01
CCDC54-201ENST00000261058 AHDC1Q5TGY3 1603 aaPredicted RBP2.49□□□□□ -2.01
CCDC54-201ENST00000261058 VWDEQ8N2E2 1590 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 NFAT5O94916 1531 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.49□□□□□ -2.01
CCDC54-201ENST00000261058 IGHV3-49A0A0A0MS15 119 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 A0A0D9SEW6 157 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 SOD1P00441 154 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 IGHV3-7P01780 117 aa2.49□□□□□ -2.01
CCDC54-201ENST00000261058 DYNLT3P51808 116 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 231.1 ms