RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 J3QLI3 93 aa9.57□□□□□ -0.88
COL8A1-201ENST00000261037 TMEM14CQ9P0S9 112 aa9.57□□□□□ -0.88
COL8A1-201ENST00000261037 NDUFA12Q9UI09 145 aa9.57□□□□□ -0.88
COL8A1-201ENST00000261037 KIAA1671Q9BY89 1806 aa9.57□□□□□ -0.88
COL8A1-201ENST00000261037 RSPO3Q9BXY4 272 aaPredicted RBP9.57□□□□□ -0.88
COL8A1-201ENST00000261037 IGKV1OR2-108A0A075B7D4 117 aa9.56□□□□□ -0.88
COL8A1-201ENST00000261037 HOXD3P31249 432 aaPredicted RBP9.56□□□□□ -0.88
COL8A1-201ENST00000261037 RSPO1Q2MKA7 263 aaPredicted RBP9.56□□□□□ -0.88
COL8A1-201ENST00000261037 TRAV12-1A0A0B4J245 112 aa9.56□□□□□ -0.88
COL8A1-201ENST00000261037 ETV2O00321 342 aaPredicted RBP9.56□□□□□ -0.88
COL8A1-201ENST00000261037 CFPP27918 469 aa9.56□□□□□ -0.88
COL8A1-201ENST00000261037 FOXE3Q13461 319 aa9.56□□□□□ -0.88
COL8A1-201ENST00000261037 CT83Q5H943 113 aa9.56□□□□□ -0.88
COL8A1-201ENST00000261037 APRG1Q8IVJ8 170 aa9.56□□□□□ -0.88
COL8A1-201ENST00000261037 LINC00311Q8N616 119 aa9.56□□□□□ -0.88
COL8A1-201ENST00000261037 PRSS33Q8NF86 280 aa9.56□□□□□ -0.88
COL8A1-201ENST00000261037 CFHR4Q92496 578 aa9.56□□□□□ -0.88
COL8A1-201ENST00000261037 MRPL35Q9NZE8 188 aaKnown RBP9.56□□□□□ -0.88
COL8A1-201ENST00000261037 E9PQ18 207 aa9.56□□□□□ -0.88
COL8A1-201ENST00000261037 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.56□□□□□ -0.88
COL8A1-201ENST00000261037 IGKV2-29A2NJV5 120 aaPredicted RBP9.56□□□□□ -0.88
COL8A1-201ENST00000261037 SHISA9B4DS77 424 aa9.56□□□□□ -0.88
COL8A1-201ENST00000261037 C22orf46C9J442 243 aa9.56□□□□□ -0.88
COL8A1-201ENST00000261037 DYNAPQ8N1N2 210 aa9.56□□□□□ -0.88
COL8A1-201ENST00000261037 IGLC1P0CG04 106 aa9.55□□□□□ -0.88
COL8A1-201ENST00000261037 FGF6P10767 208 aa9.55□□□□□ -0.88
COL8A1-201ENST00000261037 XCL1P47992 114 aa9.55□□□□□ -0.88
COL8A1-201ENST00000261037 FANCMQ8IYD8 2048 aa9.55□□□□□ -0.88
COL8A1-201ENST00000261037 IGKV2D-24A0A075B6R9 120 aa9.55□□□□□ -0.88
COL8A1-201ENST00000261037 CTSZQ9UBR2 303 aa9.55□□□□□ -0.88
COL8A1-201ENST00000261037 HAMPP81172 84 aa9.55□□□□□ -0.88
COL8A1-201ENST00000261037 IGHV2-5P01817 119 aa9.54□□□□□ -0.88
COL8A1-201ENST00000261037 DEFB105AQ8NG35 78 aa9.54□□□□□ -0.88
COL8A1-201ENST00000261037 Q9HAA7 133 aa9.54□□□□□ -0.88
COL8A1-201ENST00000261037 K7EN84 100 aa9.54□□□□□ -0.88
COL8A1-201ENST00000261037 SLURP1P55000 103 aa9.54□□□□□ -0.88
COL8A1-201ENST00000261037 MAJINQ3KP22 176 aa9.54□□□□□ -0.88
COL8A1-201ENST00000261037 TINCRA0A1B0GVN0 87 aa9.54□□□□□ -0.88
COL8A1-201ENST00000261037 LHBP01229 141 aa9.54□□□□□ -0.88
COL8A1-201ENST00000261037 DKK2Q9UBU2 259 aa9.54□□□□□ -0.88
COL8A1-201ENST00000261037 HELZP42694 1942 aaKnown RBP9.54□□□□□ -0.88
COL8A1-201ENST00000261037 U3KQE9 123 aa9.54□□□□□ -0.88
COL8A1-201ENST00000261037 A8MWP6 167 aa9.53□□□□□ -0.88
COL8A1-201ENST00000261037 TAL2Q16559 108 aa9.53□□□□□ -0.88
COL8A1-201ENST00000261037 MRPL53Q96EL3 112 aaKnown RBP9.53□□□□□ -0.88
COL8A1-201ENST00000261037 SMIM2Q9BVW6 85 aa9.53□□□□□ -0.88
COL8A1-201ENST00000261037 PLXNA2O75051 1894 aa9.53□□□□□ -0.88
COL8A1-201ENST00000261037 CEP250Q9BV73 2442 aa9.53□□□□□ -0.88
COL8A1-201ENST00000261037 NUP210Q8TEM1 1887 aaPredicted RBP9.53□□□□□ -0.88
COL8A1-201ENST00000261037 IGHV4-4A0A075B6R2 117 aa9.53□□□□□ -0.88
COL8A1-201ENST00000261037 CEND1Q8N111 149 aa9.53□□□□□ -0.88
COL8A1-201ENST00000261037 SPTBN2O15020 2390 aa9.53□□□□□ -0.88
COL8A1-201ENST00000261037 C9orf118A6NHY6 69 aa9.53□□□□□ -0.88
COL8A1-201ENST00000261037 RITA1Q96K30 269 aa9.53□□□□□ -0.88
COL8A1-201ENST00000261037 IGHV4-38-2P0DP08 117 aa9.53□□□□□ -0.88
COL8A1-201ENST00000261037 WT1P19544 449 aaPredicted RBP9.53□□□□□ -0.88
COL8A1-201ENST00000261037 NCOR1P1Q9H4R4 102 aa9.53□□□□□ -0.88
COL8A1-201ENST00000261037 ZNF491Q8N8L2 437 aa9.52□□□□□ -0.88
COL8A1-201ENST00000261037 LTAP01374 205 aa9.52□□□□□ -0.89
COL8A1-201ENST00000261037 IGHV2-70P01814 119 aa9.52□□□□□ -0.89
COL8A1-201ENST00000261037 ZMAT4Q9H898 229 aa9.52□□□□□ -0.89
COL8A1-201ENST00000261037 IGLL1P15814 213 aa9.52□□□□□ -0.89
COL8A1-201ENST00000261037 C9orf153Q5TBE3 101 aa9.52□□□□□ -0.89
COL8A1-201ENST00000261037 NRGNQ92686 78 aa9.52□□□□□ -0.89
COL8A1-201ENST00000261037 TSSC4Q9Y5U2 329 aaPredicted RBP9.52□□□□□ -0.89
COL8A1-201ENST00000261037 CCL24O00175 119 aa9.52□□□□□ -0.89
COL8A1-201ENST00000261037 CRYGCP07315 174 aa9.52□□□□□ -0.89
COL8A1-201ENST00000261037 VPREB3Q9UKI3 123 aa9.52□□□□□ -0.89
COL8A1-201ENST00000261037 RS1O15537 224 aa9.51□□□□□ -0.89
COL8A1-201ENST00000261037 OR11H6Q8NGC7 330 aa9.51□□□□□ -0.89
COL8A1-201ENST00000261037 RTTNQ86VV8 2226 aa9.51□□□□□ -0.89
COL8A1-201ENST00000261037 ELANEP08246 267 aa9.51□□□□□ -0.89
COL8A1-201ENST00000261037 FAM231DQ6ZW35 169 aa9.51□□□□□ -0.89
COL8A1-201ENST00000261037 KIAA2026Q5HYC2 2103 aa9.51□□□□□ -0.89
COL8A1-201ENST00000261037 NOTCH4Q99466 2003 aa9.51□□□□□ -0.89
COL8A1-201ENST00000261037 HERVK_113P63121 156 aa9.51□□□□□ -0.89
COL8A1-201ENST00000261037 FOXI2Q6ZQN5 318 aa9.51□□□□□ -0.89
COL8A1-201ENST00000261037 RMI2Q96E14 147 aa9.51□□□□□ -0.89
COL8A1-201ENST00000261037 CARD19Q96LW7 228 aa9.51□□□□□ -0.89
COL8A1-201ENST00000261037 DOCK8Q8NF50 2099 aa9.51□□□□□ -0.89
COL8A1-201ENST00000261037 EGR2P11161 476 aaPredicted RBP9.51□□□□□ -0.89
COL8A1-201ENST00000261037 COX8AP10176 69 aa9.51□□□□□ -0.89
COL8A1-201ENST00000261037 RPL18AQ02543 176 aaKnown RBP9.51□□□□□ -0.89
COL8A1-201ENST00000261037 DSCR8Q96T75 97 aa9.51□□□□□ -0.89
COL8A1-201ENST00000261037 MYO7BQ6PIF6 2116 aa9.5□□□□□ -0.89
COL8A1-201ENST00000261037 HEATR1Q9H583 2144 aaKnown RBP9.5□□□□□ -0.89
COL8A1-201ENST00000261037 GATA1P15976 413 aaPredicted RBP9.5□□□□□ -0.89
COL8A1-201ENST00000261037 UBE2BP63146 152 aa9.5□□□□□ -0.89
COL8A1-201ENST00000261037 LGALS9BQ3B8N2 356 aa9.5□□□□□ -0.89
COL8A1-201ENST00000261037 LGALS9CQ6DKI2 356 aa9.5□□□□□ -0.89
COL8A1-201ENST00000261037 J3QQQ9 107 aa9.5□□□□□ -0.89
COL8A1-201ENST00000261037 MRPL52Q86TS9 123 aaKnown RBP9.5□□□□□ -0.89
COL8A1-201ENST00000261037 NDUFS5O43920 106 aa9.5□□□□□ -0.89
COL8A1-201ENST00000261037 C20orf144Q9BQM9 153 aa9.5□□□□□ -0.89
COL8A1-201ENST00000261037 hADV29S1A0JD25 119 aa9.49□□□□□ -0.89
COL8A1-201ENST00000261037 IGLC7A0M8Q6 106 aa9.49□□□□□ -0.89
COL8A1-201ENST00000261037 IGLC2P0DOY2 106 aa9.49□□□□□ -0.89
COL8A1-201ENST00000261037 IGLC3P0DOY3 106 aa9.49□□□□□ -0.89
COL8A1-201ENST00000261037 BVES-AS1Q5T3Y7 98 aa9.49□□□□□ -0.89
COL8A1-201ENST00000261037 C11orf53Q8IXP5 236 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms