RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 DEFB1P60022 68 aa13.08□□□□□ -0.32
SRSF1-201ENST00000258962 ACTL10Q5JWF8 245 aa13.08□□□□□ -0.32
SRSF1-201ENST00000258962 SAMD13Q5VXD3 122 aa13.08□□□□□ -0.32
SRSF1-201ENST00000258962 RASL11AQ6T310 242 aa13.08□□□□□ -0.32
SRSF1-201ENST00000258962 C9orf47Q6ZRZ4 202 aa13.08□□□□□ -0.32
SRSF1-201ENST00000258962 TSKUQ8WUA8 353 aa13.08□□□□□ -0.32
SRSF1-201ENST00000258962 NDFIP1Q9BT67 221 aa13.08□□□□□ -0.32
SRSF1-201ENST00000258962 RPP21Q9H633 154 aaKnown RBP13.08□□□□□ -0.32
SRSF1-201ENST00000258962 NAT8BQ9UHF3 227 aa13.08□□□□□ -0.32
SRSF1-201ENST00000258962 UBE2CO00762 179 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 HIST1H2BKO60814 126 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 HIST1H2BJP06899 126 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 TRGC1P0CF51 173 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 ZNF705DP0CH99 300 aaPredicted RBP13.07□□□□□ -0.32
SRSF1-201ENST00000258962 ZNF705BP0CI00 300 aaPredicted RBP13.07□□□□□ -0.32
SRSF1-201ENST00000258962 HIST1H2BOP23527 126 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 HIST1H2BBP33778 126 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 TCL1AP56279 114 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 NDUFA6P56556 154 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 HIST1H2BDP58876 126 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 HIST1H2BCP62807 126 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 HIST2H2BEQ16778 126 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 BEAN1Q3B7T3 259 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.07□□□□□ -0.32
SRSF1-201ENST00000258962 WFDC3Q8IUB2 231 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 FRZBQ92765 325 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 HIST1H2BHQ93079 126 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 HIST1H2BNQ99877 126 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 HIST1H2BMQ99879 126 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 GFRA4Q9GZZ7 299 aa13.07□□□□□ -0.32
SRSF1-201ENST00000258962 K7EQG2 157 aa13.06□□□□□ -0.32
SRSF1-201ENST00000258962 GNB1LQ9BYB4 327 aa13.06□□□□□ -0.32
SRSF1-201ENST00000258962 OVOL1O14753 267 aa13.05□□□□□ -0.32
SRSF1-201ENST00000258962 TFPI2P48307 235 aa13.05□□□□□ -0.32
SRSF1-201ENST00000258962 ZNF80P51504 273 aaPredicted RBP13.05□□□□□ -0.32
SRSF1-201ENST00000258962 ZNF138P52744 262 aa13.05□□□□□ -0.32
SRSF1-201ENST00000258962 FABP9Q0Z7S8 132 aa13.05□□□□□ -0.32
SRSF1-201ENST00000258962 KPRPQ5T749 579 aaPredicted RBP13.05□□□□□ -0.32
SRSF1-201ENST00000258962 TMEM78Q5T7P6 136 aa13.05□□□□□ -0.32
SRSF1-201ENST00000258962 PPP1R14DQ9NXH3 145 aa13.05□□□□□ -0.32
SRSF1-201ENST00000258962 F6UB75 175 aa13.04□□□□□ -0.32
SRSF1-201ENST00000258962 ID1P41134 155 aa13.04□□□□□ -0.32
SRSF1-201ENST00000258962 CMYA5Q8N3K9 4069 aa13.04□□□□□ -0.32
SRSF1-201ENST00000258962 XKRY2A2RUG3 117 aa13.03□□□□□ -0.32
SRSF1-201ENST00000258962 PHOX2AO14813 284 aa13.03□□□□□ -0.32
SRSF1-201ENST00000258962 SH2D1AO60880 128 aa13.03□□□□□ -0.32
SRSF1-201ENST00000258962 S100A8P05109 93 aa13.03□□□□□ -0.32
SRSF1-201ENST00000258962 HOXA5P20719 270 aa13.03□□□□□ -0.32
SRSF1-201ENST00000258962 ATP5L2Q7Z4Y8 100 aa13.03□□□□□ -0.32
SRSF1-201ENST00000258962 AKR1D1P51857 326 aa13.03□□□□□ -0.32
SRSF1-201ENST00000258962 SMUG1Q53HV7 270 aa13.03□□□□□ -0.32
SRSF1-201ENST00000258962 FAM162BQ5T6X4 162 aa13.03□□□□□ -0.32
SRSF1-201ENST00000258962 C9orf66Q5T8R8 295 aa13.03□□□□□ -0.32
SRSF1-201ENST00000258962 OR8A1Q8NGG7 326 aa13.03□□□□□ -0.32
SRSF1-201ENST00000258962 OR2D3Q8NGH3 330 aa13.03□□□□□ -0.32
SRSF1-201ENST00000258962 OR10J6PQ8NGY7 276 aa13.03□□□□□ -0.32
SRSF1-201ENST00000258962 NEU1Q99519 415 aa13.03□□□□□ -0.32
SRSF1-201ENST00000258962 HLA-DQA1P01909 254 aa13.02□□□□□ -0.33
SRSF1-201ENST00000258962 FRMD6-AS1P0C7T7 363 aa13.02□□□□□ -0.33
SRSF1-201ENST00000258962 ZNF688P0C7X2 276 aa13.02□□□□□ -0.33
SRSF1-201ENST00000258962 TMEM61Q8N0U2 210 aa13.02□□□□□ -0.33
SRSF1-201ENST00000258962 GTSF1Q8WW33 167 aa13.02□□□□□ -0.33
SRSF1-201ENST00000258962 ZMAT5Q9UDW3 170 aaKnown RBP13.02□□□□□ -0.33
SRSF1-201ENST00000258962 GZMBP10144 247 aa13.01□□□□□ -0.33
SRSF1-201ENST00000258962 RPS20P60866 119 aaKnown RBP13.01□□□□□ -0.33
SRSF1-201ENST00000258962 HIST1H1AQ02539 215 aaPredicted RBP13.01□□□□□ -0.33
SRSF1-201ENST00000258962 DEFB114Q30KQ6 69 aa13.01□□□□□ -0.33
SRSF1-201ENST00000258962 Q6AWC8 147 aa13.01□□□□□ -0.33
SRSF1-201ENST00000258962 NUP35Q8NFH5 326 aa13.01□□□□□ -0.33
SRSF1-201ENST00000258962 DYNLRB2Q8TF09 96 aa13.01□□□□□ -0.33
SRSF1-201ENST00000258962 LINC00477Q96M19 166 aa13.01□□□□□ -0.33
SRSF1-201ENST00000258962 HIGD1CA8MV81 97 aa13□□□□□ -0.33
SRSF1-201ENST00000258962 SNURFLB1AK76 121 aa13□□□□□ -0.33
SRSF1-201ENST00000258962 SPINK4O60575 86 aa13□□□□□ -0.33
SRSF1-201ENST00000258962 PSMG4Q5JS54 123 aa13□□□□□ -0.33
SRSF1-201ENST00000258962 RBPMS2Q6ZRY4 209 aaKnown RBP13□□□□□ -0.33
SRSF1-201ENST00000258962 FAM19A4Q96LR4 140 aa13□□□□□ -0.33
SRSF1-201ENST00000258962 MRPL18Q9H0U6 180 aaKnown RBP13□□□□□ -0.33
SRSF1-201ENST00000258962 LENEPQ9Y5L5 61 aa13□□□□□ -0.33
SRSF1-201ENST00000258962 TRAV2A0A0B4J234 112 aa12.99□□□□□ -0.33
SRSF1-201ENST00000258962 PRB2P02812 416 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-201ENST00000258962 INSL3P51460 131 aa12.99□□□□□ -0.33
SRSF1-201ENST00000258962 SNRPD3P62318 126 aaKnown RBP12.99□□□□□ -0.33
SRSF1-201ENST00000258962 PAFAH1B2P68402 229 aa12.99□□□□□ -0.33
SRSF1-201ENST00000258962 PRR9Q5T870 116 aa12.99□□□□□ -0.33
SRSF1-201ENST00000258962 GDF5OSQ5U4N7 250 aa12.99□□□□□ -0.33
SRSF1-201ENST00000258962 SIGLEC8Q9NYZ4 499 aa12.99□□□□□ -0.33
SRSF1-201ENST00000258962 MEGF8Q7Z7M0 2845 aa12.99□□□□□ -0.33
SRSF1-201ENST00000258962 S100A2P29034 98 aa12.98□□□□□ -0.33
SRSF1-201ENST00000258962 FOXA3P55318 350 aaPredicted RBP12.98□□□□□ -0.33
SRSF1-201ENST00000258962 RAB4BP61018 213 aa12.98□□□□□ -0.33
SRSF1-201ENST00000258962 CD300EQ496F6 205 aaPredicted RBP12.98□□□□□ -0.33
SRSF1-201ENST00000258962 COA6Q5JTJ3 125 aaKnown RBP12.98□□□□□ -0.33
SRSF1-201ENST00000258962 ZFAND2AQ8N6M9 145 aa12.98□□□□□ -0.33
SRSF1-201ENST00000258962 BORCS7Q96B45 105 aa12.98□□□□□ -0.33
SRSF1-201ENST00000258962 A0A1B0GW15 77 aa12.98□□□□□ -0.33
SRSF1-201ENST00000258962 SAP30O75446 220 aa12.98□□□□□ -0.33
SRSF1-201ENST00000258962 EGFEM1PQ0D2K5 195 aa12.98□□□□□ -0.33
SRSF1-201ENST00000258962 MRPL54Q6P161 138 aaKnown RBP12.98□□□□□ -0.33
SRSF1-201ENST00000258962 TMEM189A5PLL7 270 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms