RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 TCTAP57738 103 aa11.71□□□□□ -0.54
DDX56-201ENST00000258772 C18orf15Q96N68 181 aa11.71□□□□□ -0.54
DDX56-201ENST00000258772 BPESC1Q9GZL8 116 aa11.71□□□□□ -0.54
DDX56-201ENST00000258772 NXT2Q9NPJ8 142 aaKnown RBP11.71□□□□□ -0.54
DDX56-201ENST00000258772 C7orf71A4D174 169 aa11.7□□□□□ -0.54
DDX56-201ENST00000258772 SMAD7O15105 426 aaKnown RBP11.7□□□□□ -0.54
DDX56-201ENST00000258772 NPFFO15130 113 aa11.7□□□□□ -0.54
DDX56-201ENST00000258772 GATA1P15976 413 aaPredicted RBP11.7□□□□□ -0.54
DDX56-201ENST00000258772 EVI2AP22794 236 aa11.7□□□□□ -0.54
DDX56-201ENST00000258772 RBX1P62877 108 aa11.7□□□□□ -0.54
DDX56-201ENST00000258772 TRAV8-6A0A0B4J262 113 aa11.7□□□□□ -0.54
DDX56-201ENST00000258772 TMEM78Q5T7P6 136 aa11.7□□□□□ -0.54
DDX56-201ENST00000258772 C8orf86Q6ZUL3 223 aa11.7□□□□□ -0.54
DDX56-201ENST00000258772 C5orf56Q8N8D9 126 aa11.7□□□□□ -0.54
DDX56-201ENST00000258772 OR9G4Q8NGQ1 327 aa11.7□□□□□ -0.54
DDX56-201ENST00000258772 MRPL53Q96EL3 112 aaKnown RBP11.7□□□□□ -0.54
DDX56-201ENST00000258772 PEF1Q9UBV8 284 aaKnown RBP11.7□□□□□ -0.54
DDX56-201ENST00000258772 U3KQE9 123 aa11.7□□□□□ -0.54
DDX56-201ENST00000258772 SIVA1O15304 175 aa11.69□□□□□ -0.54
DDX56-201ENST00000258772 A1L4Q6 167 aa11.69□□□□□ -0.54
DDX56-201ENST00000258772 HIF1ANQ9NWT6 349 aa11.69□□□□□ -0.54
DDX56-201ENST00000258772 ATP5G2Q06055 141 aa11.68□□□□□ -0.54
DDX56-201ENST00000258772 C9orf47Q6ZRZ4 202 aa11.68□□□□□ -0.54
DDX56-201ENST00000258772 PCP2Q8IVA1 136 aa11.68□□□□□ -0.54
DDX56-201ENST00000258772 CIDEAO60543 219 aa11.68□□□□□ -0.54
DDX56-201ENST00000258772 UQCRFS1P47985 274 aa11.68□□□□□ -0.54
DDX56-201ENST00000258772 NMUP48645 174 aa11.68□□□□□ -0.54
DDX56-201ENST00000258772 ADAMTSL5Q6ZMM2 481 aa11.68□□□□□ -0.54
DDX56-201ENST00000258772 IGHV7-4-1A0A0J9YVY3 117 aa11.67□□□□□ -0.54
DDX56-201ENST00000258772 TRGV3P03979 118 aa11.67□□□□□ -0.54
DDX56-201ENST00000258772 Q8N8P6 123 aa11.67□□□□□ -0.54
DDX56-201ENST00000258772 PIFOQ8TCI5 191 aa11.67□□□□□ -0.54
DDX56-201ENST00000258772 ZMAT4Q9H898 229 aa11.67□□□□□ -0.54
DDX56-201ENST00000258772 IGLV2-18A0A075B6J9 118 aa11.66□□□□□ -0.54
DDX56-201ENST00000258772 HSD52Q0P140 79 aa11.66□□□□□ -0.54
DDX56-201ENST00000258772 TMEM219Q86XT9 240 aa11.66□□□□□ -0.54
DDX56-201ENST00000258772 OR4X2Q8NGF9 303 aa11.66□□□□□ -0.54
DDX56-201ENST00000258772 COL25A1Q9BXS0 654 aaPredicted RBP11.66□□□□□ -0.54
DDX56-201ENST00000258772 A6NDN8 102 aa11.66□□□□□ -0.54
DDX56-201ENST00000258772 PRSS1P07477 247 aa11.66□□□□□ -0.54
DDX56-201ENST00000258772 Q6ZQT7 251 aa11.66□□□□□ -0.54
DDX56-201ENST00000258772 OR2K2Q8NGT1 345 aa11.66□□□□□ -0.54
DDX56-201ENST00000258772 TMEM158Q8WZ71 300 aa11.66□□□□□ -0.54
DDX56-201ENST00000258772 ZFHX3Q15911 3703 aa11.65□□□□□ -0.54
DDX56-201ENST00000258772 H3BRM9 83 aa11.65□□□□□ -0.54
DDX56-201ENST00000258772 SMIM15Q7Z3B0 74 aa11.65□□□□□ -0.54
DDX56-201ENST00000258772 LINC00527Q9UJ94 153 aa11.65□□□□□ -0.54
DDX56-201ENST00000258772 HHLA3Q9XRX5 114 aa11.65□□□□□ -0.54
DDX56-201ENST00000258772 TRAV41A0A0B4J266 112 aa11.65□□□□□ -0.54
DDX56-201ENST00000258772 C16orf92Q96LL3 132 aa11.65□□□□□ -0.54
DDX56-201ENST00000258772 ATP6V0BQ99437 205 aa11.65□□□□□ -0.54
DDX56-201ENST00000258772 CDKN1BP46527 198 aa11.64□□□□□ -0.55
DDX56-201ENST00000258772 C19orf54Q5BKX5 351 aa11.64□□□□□ -0.55
DDX56-201ENST00000258772 PSMG4Q5JS54 123 aa11.64□□□□□ -0.55
DDX56-201ENST00000258772 MOB4Q9Y3A3 225 aa11.64□□□□□ -0.55
DDX56-201ENST00000258772 IGHV4-4A0A075B6R2 117 aa11.64□□□□□ -0.55
DDX56-201ENST00000258772 NRACQ8N912 160 aa11.64□□□□□ -0.55
DDX56-201ENST00000258772 GLMPQ8WWB7 406 aa11.64□□□□□ -0.55
DDX56-201ENST00000258772 CST9LQ9H4G1 147 aa11.64□□□□□ -0.55
DDX56-201ENST00000258772 IGHV3OR16-10A0A075B7F0 116 aa11.63□□□□□ -0.55
DDX56-201ENST00000258772 C9orf118A6NHY6 69 aa11.63□□□□□ -0.55
DDX56-201ENST00000258772 FAM223BA6NKX1 122 aa11.63□□□□□ -0.55
DDX56-201ENST00000258772 FAM223AQ8IWN6 122 aa11.63□□□□□ -0.55
DDX56-201ENST00000258772 UFC1Q9Y3C8 167 aa11.63□□□□□ -0.55
DDX56-201ENST00000258772 IGKV2D-26A0A0A0MRZ7 120 aa11.63□□□□□ -0.55
DDX56-201ENST00000258772 TRAV26-2A0A0B4J265 109 aa11.63□□□□□ -0.55
DDX56-201ENST00000258772 IGKCP01834 107 aa11.63□□□□□ -0.55
DDX56-201ENST00000258772 SMIM17P0DL12 118 aa11.63□□□□□ -0.55
DDX56-201ENST00000258772 LY6DQ14210 128 aa11.63□□□□□ -0.55
DDX56-201ENST00000258772 KIR3DS1Q14943 382 aa11.63□□□□□ -0.55
DDX56-201ENST00000258772 SPANXN1Q5VSR9 72 aa11.63□□□□□ -0.55
DDX56-201ENST00000258772 C20orf173Q96LM9 149 aa11.63□□□□□ -0.55
DDX56-201ENST00000258772 FOXC2Q99958 501 aa11.63□□□□□ -0.55
DDX56-201ENST00000258772 GAGE12BA1L429 117 aa11.62□□□□□ -0.55
DDX56-201ENST00000258772 CRIP2P52943 208 aaPredicted RBP11.62□□□□□ -0.55
DDX56-201ENST00000258772 PRR9Q5T870 116 aa11.62□□□□□ -0.55
DDX56-201ENST00000258772 C9orf139Q6ZV77 190 aa11.62□□□□□ -0.55
DDX56-201ENST00000258772 SMPXQ9UHP9 88 aa11.62□□□□□ -0.55
DDX56-201ENST00000258772 ABCA2Q9BZC7 2435 aa11.62□□□□□ -0.55
DDX56-201ENST00000258772 GAGE10A6NGK3 116 aa11.61□□□□□ -0.55
DDX56-201ENST00000258772 ATP5LO75964 103 aa11.61□□□□□ -0.55
DDX56-201ENST00000258772 ARL3P36405 182 aa11.61□□□□□ -0.55
DDX56-201ENST00000258772 LAGE3Q14657 143 aa11.61□□□□□ -0.55
DDX56-201ENST00000258772 ITLN2Q8WWU7 325 aaPredicted RBP11.61□□□□□ -0.55
DDX56-201ENST00000258772 AP1S3Q96PC3 154 aa11.61□□□□□ -0.55
DDX56-201ENST00000258772 LENEPQ9Y5L5 61 aa11.61□□□□□ -0.55
DDX56-201ENST00000258772 IGF1P05019 195 aa11.61□□□□□ -0.55
DDX56-201ENST00000258772 H3BVH4 76 aa11.6□□□□□ -0.55
DDX56-201ENST00000258772 C19orf84I3L1E1 186 aa11.6□□□□□ -0.55
DDX56-201ENST00000258772 UNQ9165/PRO28630Q6UXU0 137 aa11.6□□□□□ -0.55
DDX56-201ENST00000258772 IGHV1-69DA0A0B4J2H0 117 aa11.6□□□□□ -0.55
DDX56-201ENST00000258772 H3BUT2 72 aa11.6□□□□□ -0.55
DDX56-201ENST00000258772 DPM2O94777 84 aa11.6□□□□□ -0.55
DDX56-201ENST00000258772 TRBV12-3P01733 135 aa11.6□□□□□ -0.55
DDX56-201ENST00000258772 IGHV1-69P01742 117 aa11.6□□□□□ -0.55
DDX56-201ENST00000258772 OCIAD2Q56VL3 154 aa11.6□□□□□ -0.55
DDX56-201ENST00000258772 BRD3OSQ6XYD6 125 aa11.6□□□□□ -0.55
DDX56-201ENST00000258772 GPHB5Q86YW7 130 aa11.6□□□□□ -0.55
DDX56-201ENST00000258772 MYOZ3Q8TDC0 251 aa11.6□□□□□ -0.55
DDX56-201ENST00000258772 LINC00477Q96M19 166 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms