RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SPATA45Q537H7 98 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 Q6ZN92 141 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 TTC9CQ8N5M4 171 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 C8orf31Q8N9H6 132 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 ZNF502Q8TBZ5 544 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 GNRH2O43555 120 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 WDR73Q6P4I2 378 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 NPFFR1Q9GZQ6 430 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 JPT2Q9H910 190 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 BUB3O43684 328 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 ZNF324O75467 553 aaPredicted RBP6.99□□□□□ -1.29
CKAP2-201ENST00000258607 IGLV2-11P01706 119 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 PAFAH1B2P68402 229 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 FAM110DQ8TAY7 271 aaPredicted RBP6.99□□□□□ -1.29
CKAP2-201ENST00000258607 MBD6Q96DN6 1003 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 PRR25Q96S07 402 aa6.99□□□□□ -1.29
CKAP2-201ENST00000258607 TRAV30A0A087WSZ9 112 aa6.98□□□□□ -1.29
CKAP2-201ENST00000258607 TCAPO15273 167 aa6.98□□□□□ -1.29
CKAP2-201ENST00000258607 CD99P14209 185 aa6.98□□□□□ -1.29
CKAP2-201ENST00000258607 RAB9AP51151 201 aa6.98□□□□□ -1.29
CKAP2-201ENST00000258607 ATP5IP56385 69 aaPredicted RBP6.98□□□□□ -1.29
CKAP2-201ENST00000258607 SPINK13Q1W4C9 94 aa6.98□□□□□ -1.29
CKAP2-201ENST00000258607 FER1L6-AS1Q8NA97 138 aa6.98□□□□□ -1.29
CKAP2-201ENST00000258607 C20orf173Q96LM9 149 aa6.98□□□□□ -1.29
CKAP2-201ENST00000258607 TTTY13Q9BZ97 58 aa6.98□□□□□ -1.29
CKAP2-201ENST00000258607 KLF2Q9Y5W3 355 aaPredicted RBP6.98□□□□□ -1.29
CKAP2-201ENST00000258607 SMIM27A0A1W2PRY6 76 aa6.98□□□□□ -1.29
CKAP2-201ENST00000258607 FNDC10F2Z333 226 aa6.98□□□□□ -1.29
CKAP2-201ENST00000258607 LEPROTL1O95214 131 aa6.98□□□□□ -1.29
CKAP2-201ENST00000258607 LTAP01374 205 aa6.98□□□□□ -1.29
CKAP2-201ENST00000258607 C14orf178Q8N769 122 aaPredicted RBP6.98□□□□□ -1.29
CKAP2-201ENST00000258607 FAM162BQ5T6X4 162 aa6.97□□□□□ -1.29
CKAP2-201ENST00000258607 GNB1LQ9BYB4 327 aa6.97□□□□□ -1.29
CKAP2-201ENST00000258607 PRR9Q5T870 116 aa6.97□□□□□ -1.29
CKAP2-201ENST00000258607 EBLN2Q6P2I7 272 aa6.97□□□□□ -1.29
CKAP2-201ENST00000258607 LURAP1LQ8IV03 231 aa6.97□□□□□ -1.29
CKAP2-201ENST00000258607 C11orf21Q9P2W6 132 aa6.97□□□□□ -1.29
CKAP2-201ENST00000258607 NSUN5P1Q3KNT7 163 aa6.96□□□□□ -1.29
CKAP2-201ENST00000258607 APRG1Q8IVJ8 170 aa6.96□□□□□ -1.29
CKAP2-201ENST00000258607 Q8N6K4 173 aa6.96□□□□□ -1.29
CKAP2-201ENST00000258607 STPG4Q8N801 248 aa6.96□□□□□ -1.29
CKAP2-201ENST00000258607 PRELID3AQ96N28 172 aa6.96□□□□□ -1.29
CKAP2-201ENST00000258607 SPOCK3Q9BQ16 436 aa6.96□□□□□ -1.29
CKAP2-201ENST00000258607 ALKBH7Q9BT30 221 aaPredicted RBP6.96□□□□□ -1.29
CKAP2-201ENST00000258607 NSD1Q96L73 2696 aaPredicted RBP6.96□□□□□ -1.3
CKAP2-201ENST00000258607 PRSS1P07477 247 aa6.96□□□□□ -1.3
CKAP2-201ENST00000258607 LINC01356Q8N9X3 169 aa6.96□□□□□ -1.3
CKAP2-201ENST00000258607 RNF5Q99942 180 aa6.96□□□□□ -1.3
CKAP2-201ENST00000258607 NPYP01303 97 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 TYMSP04818 313 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 NMUP48645 174 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 YPEL3P61236 119 aaPredicted RBP6.95□□□□□ -1.3
CKAP2-201ENST00000258607 PKIAP61925 76 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 RIGQ13278 110 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 SPATA12Q7Z6I5 190 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 UBE2E2Q96LR5 201 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 BAHCC1Q9P281 2608 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 LOC102724200A0A096LPH7 203 aaPredicted RBP6.95□□□□□ -1.3
CKAP2-201ENST00000258607 WI2-2373I1.2A0A1W2PRP0 233 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 CLPSL1A2RUU4 121 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 CD7P09564 240 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 MYCNOSP40205 109 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 KLHL30-AS1Q8NEE0 82 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 OR10J6PQ8NGY7 276 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 AP5S1Q9NUS5 200 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 FCER1GP30273 86 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 ZNF48Q96MX3 618 aaPredicted RBP6.95□□□□□ -1.3
CKAP2-201ENST00000258607 MLST8Q9BVC4 326 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 PHLDA3Q9Y5J5 127 aa6.95□□□□□ -1.3
CKAP2-201ENST00000258607 IGHV4OR15-8A0A075B7B6 117 aa6.94□□□□□ -1.3
CKAP2-201ENST00000258607 A0A087WW49 117 aa6.94□□□□□ -1.3
CKAP2-201ENST00000258607 OR4C46A6NHA9 309 aa6.94□□□□□ -1.3
CKAP2-201ENST00000258607 LINC00614P0C842 121 aa6.94□□□□□ -1.3
CKAP2-201ENST00000258607 PSG9Q00887 426 aa6.94□□□□□ -1.3
CKAP2-201ENST00000258607 ZFAND3Q9H8U3 227 aa6.94□□□□□ -1.3
CKAP2-201ENST00000258607 FABP5P3A8MUU1 101 aa6.94□□□□□ -1.3
CKAP2-201ENST00000258607 HNRNPA3P51991 378 aaKnown RBP6.94□□□□□ -1.3
CKAP2-201ENST00000258607 OR11H1Q8NG94 326 aa6.94□□□□□ -1.3
CKAP2-201ENST00000258607 TMEM208Q9BTX3 173 aa6.94□□□□□ -1.3
CKAP2-201ENST00000258607 ZNF256Q9Y2P7 627 aaPredicted RBP6.94□□□□□ -1.3
CKAP2-201ENST00000258607 IGHV1-24A0A0C4DH33 117 aa6.94□□□□□ -1.3
CKAP2-201ENST00000258607 IGHG4P01861 327 aa6.94□□□□□ -1.3
CKAP2-201ENST00000258607 MT-ND6P03923 174 aa6.94□□□□□ -1.3
CKAP2-201ENST00000258607 CACNG7P62955 275 aa6.94□□□□□ -1.3
CKAP2-201ENST00000258607 ZC2HC1BQ5TFG8 222 aa6.94□□□□□ -1.3
CKAP2-201ENST00000258607 LINC00469Q8N7U9 141 aa6.94□□□□□ -1.3
CKAP2-201ENST00000258607 C7orf71A4D174 169 aa6.93□□□□□ -1.3
CKAP2-201ENST00000258607 TMEM8BA6NDV4 472 aa6.93□□□□□ -1.3
CKAP2-201ENST00000258607 IGHV3-16A0A0C4DH30 117 aa6.93□□□□□ -1.3
CKAP2-201ENST00000258607 CBY3A6NI87 242 aa6.93□□□□□ -1.3
CKAP2-201ENST00000258607 ZNF25P17030 456 aaPredicted RBP6.93□□□□□ -1.3
CKAP2-201ENST00000258607 SFTA2Q6UW10 78 aa6.93□□□□□ -1.3
CKAP2-201ENST00000258607 S100A7AQ86SG5 101 aa6.93□□□□□ -1.3
CKAP2-201ENST00000258607 PEF1Q9UBV8 284 aaKnown RBP6.93□□□□□ -1.3
CKAP2-201ENST00000258607 AKAP9Q99996 3911 aa6.93□□□□□ -1.3
CKAP2-201ENST00000258607 A8MWP6 167 aa6.92□□□□□ -1.3
CKAP2-201ENST00000258607 DEFB113Q30KQ7 82 aa6.92□□□□□ -1.3
CKAP2-201ENST00000258607 ANXA2RQ3ZCQ2 193 aa6.92□□□□□ -1.3
CKAP2-201ENST00000258607 MRPL51Q4U2R6 128 aaKnown RBP6.92□□□□□ -1.3
CKAP2-201ENST00000258607 KLHDC1Q8N7A1 406 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms