RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 NFE4Q86UQ8 179 aa8.9□□□□□ -0.98
TROAP-201ENST00000257909 RALYQ9UKM9 306 aaKnown RBP8.9□□□□□ -0.98
TROAP-201ENST00000257909 S4R3C0 116 aa8.9□□□□□ -0.98
TROAP-201ENST00000257909 IGLV11-55A0A075B6I3 123 aa8.9□□□□□ -0.99
TROAP-201ENST00000257909 RBAKDNA6NC62 111 aa8.9□□□□□ -0.99
TROAP-201ENST00000257909 MT-ATP8P03928 68 aa8.9□□□□□ -0.99
TROAP-201ENST00000257909 OR11H6Q8NGC7 330 aa8.9□□□□□ -0.99
TROAP-201ENST00000257909 PPDPFLQ8WWR9 84 aa8.9□□□□□ -0.99
TROAP-201ENST00000257909 RAXQ9Y2V3 346 aa8.9□□□□□ -0.99
TROAP-201ENST00000257909 NBR2O15453 112 aa8.89□□□□□ -0.99
TROAP-201ENST00000257909 LGALS1P09382 135 aaKnown RBP8.89□□□□□ -0.99
TROAP-201ENST00000257909 EFNA4P52798 201 aa8.89□□□□□ -0.99
TROAP-201ENST00000257909 DLX1P56177 255 aa8.89□□□□□ -0.99
TROAP-201ENST00000257909 C21orf62Q9NYP8 219 aa8.89□□□□□ -0.99
TROAP-201ENST00000257909 ERG28Q9UKR5 140 aa8.89□□□□□ -0.99
TROAP-201ENST00000257909 SMAD5-AS1Q9Y6J3 95 aa8.89□□□□□ -0.99
TROAP-201ENST00000257909 F8W735 103 aaPredicted RBP8.89□□□□□ -0.99
TROAP-201ENST00000257909 TRGV3P03979 118 aa8.89□□□□□ -0.99
TROAP-201ENST00000257909 PSMB2P49721 201 aa8.89□□□□□ -0.99
TROAP-201ENST00000257909 TMEM78Q5T7P6 136 aa8.89□□□□□ -0.99
TROAP-201ENST00000257909 DYNAPQ8N1N2 210 aa8.89□□□□□ -0.99
TROAP-201ENST00000257909 CFHR4Q92496 578 aa8.89□□□□□ -0.99
TROAP-201ENST00000257909 FANCD2OSQ96PS1 177 aa8.89□□□□□ -0.99
TROAP-201ENST00000257909 FAM110AQ9BQ89 295 aa8.89□□□□□ -0.99
TROAP-201ENST00000257909 DCHS1Q96JQ0 3298 aa8.89□□□□□ -0.99
TROAP-201ENST00000257909 LAMA5O15230 3695 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 LINC01549A6NIU2 74 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 LY6LH3BQJ8 138 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 SLC25A16P16260 332 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 COX7A1P24310 79 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 HLA-DMBP28068 263 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 UBE2D1P51668 147 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 XGP55808 180 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 ORMDL2Q53FV1 153 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 IGFL4Q6B9Z1 124 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 TEN1Q86WV5 123 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 IGFBPL1Q8WX77 278 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 IGKV3D-20A0A0C4DH25 116 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 LOC107984156A0A0G2JMH3 177 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 UBE2D3P61077 147 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 UBE2D2P62837 147 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 ARL17AQ8IVW1 177 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 RNASE6Q93091 150 aaKnown RBP8.88□□□□□ -0.99
TROAP-201ENST00000257909 SS18L2Q9UHA2 77 aa8.88□□□□□ -0.99
TROAP-201ENST00000257909 TIMM23O14925 209 aa8.87□□□□□ -0.99
TROAP-201ENST00000257909 PRB3Q04118 309 aaPredicted RBP8.87□□□□□ -0.99
TROAP-201ENST00000257909 BSPH1Q075Z2 132 aa8.87□□□□□ -0.99
TROAP-201ENST00000257909 ERCC8Q13216 396 aa8.87□□□□□ -0.99
TROAP-201ENST00000257909 NEXN-AS1Q8NBZ9 246 aa8.87□□□□□ -0.99
TROAP-201ENST00000257909 NPBQ8NG41 125 aa8.87□□□□□ -0.99
TROAP-201ENST00000257909 SCGB3A1Q96QR1 104 aa8.87□□□□□ -0.99
TROAP-201ENST00000257909 SMIM2Q9BVW6 85 aa8.87□□□□□ -0.99
TROAP-201ENST00000257909 UFC1Q9Y3C8 167 aa8.87□□□□□ -0.99
TROAP-201ENST00000257909 ZGRF1Q86YA3 2104 aa8.87□□□□□ -0.99
TROAP-201ENST00000257909 TRBV20-1A0A075B6N2 111 aa8.87□□□□□ -0.99
TROAP-201ENST00000257909 IGHV4-4A0A075B6R2 117 aa8.87□□□□□ -0.99
TROAP-201ENST00000257909 TRAV26-2A0A0B4J265 109 aa8.87□□□□□ -0.99
TROAP-201ENST00000257909 HERV-K104P63124 156 aa8.87□□□□□ -0.99
TROAP-201ENST00000257909 FHL3Q13643 280 aa8.87□□□□□ -0.99
TROAP-201ENST00000257909 TOMM6Q96B49 74 aa8.87□□□□□ -0.99
TROAP-201ENST00000257909 SLC50A1Q9BRV3 221 aa8.87□□□□□ -0.99
TROAP-201ENST00000257909 ZNF815PA8K554 130 aa8.86□□□□□ -0.99
TROAP-201ENST00000257909 SRSF9Q13242 221 aaKnown RBP eCLIP8.86□□□□□ -0.99
TROAP-201ENST00000257909 SCGB1D4Q6XE38 83 aa8.86□□□□□ -0.99
TROAP-201ENST00000257909 GLMPQ8WWB7 406 aa8.86□□□□□ -0.99
TROAP-201ENST00000257909 PRADC1Q9BSG0 188 aa8.86□□□□□ -0.99
TROAP-201ENST00000257909 DYNLRB1Q9NP97 96 aa8.86□□□□□ -0.99
TROAP-201ENST00000257909 IGHV7-4-1A0A0J9YVY3 117 aa8.86□□□□□ -0.99
TROAP-201ENST00000257909 TMEM262E9PQX1 116 aa8.86□□□□□ -0.99
TROAP-201ENST00000257909 SPANXN1Q5VSR9 72 aa8.86□□□□□ -0.99
TROAP-201ENST00000257909 TRBV7-9A0A0J9YWB2 115 aa8.85□□□□□ -0.99
TROAP-201ENST00000257909 BRI3O95415 125 aa8.85□□□□□ -0.99
TROAP-201ENST00000257909 RNF183Q96D59 192 aa8.85□□□□□ -0.99
TROAP-201ENST00000257909 CARD19Q96LW7 228 aa8.85□□□□□ -0.99
TROAP-201ENST00000257909 DMXL2Q8TDJ6 3036 aa8.85□□□□□ -0.99
TROAP-201ENST00000257909 BDP1A6H8Y1 2624 aa8.85□□□□□ -0.99
TROAP-201ENST00000257909 PRAC2D3DTV9 90 aa8.85□□□□□ -0.99
TROAP-201ENST00000257909 CLEC3BP05452 202 aa8.85□□□□□ -0.99
TROAP-201ENST00000257909 CTSGP08311 255 aa8.85□□□□□ -0.99
TROAP-201ENST00000257909 ZNF688P0C7X2 276 aa8.85□□□□□ -0.99
TROAP-201ENST00000257909 ZFP2Q6ZN57 461 aa8.85□□□□□ -0.99
TROAP-201ENST00000257909 SBSPONQ8IVN8 264 aa8.85□□□□□ -0.99
TROAP-201ENST00000257909 ANAPC13Q9BS18 74 aa8.85□□□□□ -0.99
TROAP-201ENST00000257909 C11orf21Q9P2W6 132 aa8.85□□□□□ -0.99
TROAP-201ENST00000257909 CUL9Q8IWT3 2517 aa8.85□□□□□ -0.99
TROAP-201ENST00000257909 A8MWV9 139 aa8.84□□□□□ -0.99
TROAP-201ENST00000257909 ZFAND6Q6FIF0 208 aa8.84□□□□□ -0.99
TROAP-201ENST00000257909 DMXL1Q9Y485 3027 aa8.84□□□□□ -0.99
TROAP-201ENST00000257909 ZNF318Q5VUA4 2279 aa8.84□□□□□ -0.99
TROAP-201ENST00000257909 CD7P09564 240 aa8.84□□□□□ -0.99
TROAP-201ENST00000257909 DEFB109BQ30KR1 87 aa8.84□□□□□ -0.99
TROAP-201ENST00000257909 PTH2Q96A98 100 aa8.84□□□□□ -0.99
TROAP-201ENST00000257909 VKORC1Q9BQB6 163 aa8.84□□□□□ -0.99
TROAP-201ENST00000257909 HIF1ANQ9NWT6 349 aa8.84□□□□□ -0.99
TROAP-201ENST00000257909 COX6B1P14854 86 aa8.83□□□□□ -1
TROAP-201ENST00000257909 NDUFA11Q86Y39 141 aa8.83□□□□□ -1
TROAP-201ENST00000257909 KLK15Q9H2R5 256 aa8.83□□□□□ -1
TROAP-201ENST00000257909 DPM3Q9P2X0 92 aa8.83□□□□□ -1
TROAP-201ENST00000257909 BSNQ9UPA5 3926 aa8.83□□□□□ -1
TROAP-201ENST00000257909 PRSS29PA6NIE9 313 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms