RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 VGLL1Q99990 258 aa11.35□□□□□ -0.59
TRAFD1-201ENST00000257604 A8MWL6 223 aa11.34□□□□□ -0.59
TRAFD1-201ENST00000257604 CT45A10P0DMU9 189 aa11.34□□□□□ -0.59
TRAFD1-201ENST00000257604 PAX8Q06710 450 aa11.34□□□□□ -0.59
TRAFD1-201ENST00000257604 LOXL1Q08397 574 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-201ENST00000257604 PSG9Q00887 426 aa11.34□□□□□ -0.59
TRAFD1-201ENST00000257604 FMC1Q96HJ9 113 aa11.34□□□□□ -0.59
TRAFD1-201ENST00000257604 CST9LQ9H4G1 147 aa11.34□□□□□ -0.59
TRAFD1-201ENST00000257604 MOB4Q9Y3A3 225 aa11.34□□□□□ -0.59
TRAFD1-201ENST00000257604 TENM4Q6N022 2769 aa11.34□□□□□ -0.59
TRAFD1-201ENST00000257604 SMAD7O15105 426 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-201ENST00000257604 IGHV4-59P01825 116 aa11.34□□□□□ -0.59
TRAFD1-201ENST00000257604 CCDC140Q96MF4 163 aa11.34□□□□□ -0.59
TRAFD1-201ENST00000257604 CHTOPQ9Y3Y2 248 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-201ENST00000257604 FBLL1A6NHQ2 334 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-201ENST00000257604 SCGB2A1O75556 95 aa11.33□□□□□ -0.6
TRAFD1-201ENST00000257604 ARMS2P0C7Q2 107 aa11.33□□□□□ -0.6
TRAFD1-201ENST00000257604 PLP1P60201 277 aa11.33□□□□□ -0.6
TRAFD1-201ENST00000257604 MAP1LC3CQ9BXW4 147 aa11.33□□□□□ -0.6
TRAFD1-201ENST00000257604 TMEM191AQ9H0A3 160 aa11.33□□□□□ -0.6
TRAFD1-201ENST00000257604 ST20Q9HBF5 79 aa11.33□□□□□ -0.6
TRAFD1-201ENST00000257604 UBR5O95071 2799 aaPredicted RBP11.33□□□□□ -0.6
TRAFD1-201ENST00000257604 JMJD1CQ15652 2540 aa11.33□□□□□ -0.6
TRAFD1-201ENST00000257604 PRAC2D3DTV9 90 aa11.33□□□□□ -0.6
TRAFD1-201ENST00000257604 RPL7P18124 248 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-201ENST00000257604 ORM1P02763 201 aa11.32□□□□□ -0.6
TRAFD1-201ENST00000257604 OCIAD2Q56VL3 154 aa11.32□□□□□ -0.6
TRAFD1-201ENST00000257604 FAM110DQ8TAY7 271 aaPredicted RBP11.32□□□□□ -0.6
TRAFD1-201ENST00000257604 GLMPQ8WWB7 406 aa11.32□□□□□ -0.6
TRAFD1-201ENST00000257604 SMKR1H3BMG3 65 aa11.32□□□□□ -0.6
TRAFD1-201ENST00000257604 SPRY2O43597 315 aa11.32□□□□□ -0.6
TRAFD1-201ENST00000257604 EBI3Q14213 229 aa11.32□□□□□ -0.6
TRAFD1-201ENST00000257604 PIFOQ8TCI5 191 aa11.32□□□□□ -0.6
TRAFD1-201ENST00000257604 SRSF8Q9BRL6 282 aaKnown RBP11.32□□□□□ -0.6
TRAFD1-201ENST00000257604 WI2-2373I1.2A0A1W2PRP0 233 aa11.32□□□□□ -0.6
TRAFD1-201ENST00000257604 TMEM8BA6NDV4 472 aa11.32□□□□□ -0.6
TRAFD1-201ENST00000257604 ATP5L2Q7Z4Y8 100 aa11.32□□□□□ -0.6
TRAFD1-201ENST00000257604 EEF1AKMT3Q96AZ1 226 aa11.32□□□□□ -0.6
TRAFD1-201ENST00000257604 MLST8Q9BVC4 326 aa11.32□□□□□ -0.6
TRAFD1-201ENST00000257604 B4DSR2 109 aa11.31□□□□□ -0.6
TRAFD1-201ENST00000257604 LTAP01374 205 aa11.31□□□□□ -0.6
TRAFD1-201ENST00000257604 SRSF1Q07955 248 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRAFD1-201ENST00000257604 RBPMS2Q6ZRY4 209 aaKnown RBP11.31□□□□□ -0.6
TRAFD1-201ENST00000257604 PRSS3P2Q8NHM4 247 aa11.31□□□□□ -0.6
TRAFD1-201ENST00000257604 TTTY13Q9BZ97 58 aa11.31□□□□□ -0.6
TRAFD1-201ENST00000257604 ARL3P36405 182 aa11.31□□□□□ -0.6
TRAFD1-201ENST00000257604 DEFB112Q30KQ8 113 aa11.31□□□□□ -0.6
TRAFD1-201ENST00000257604 UNQ9165/PRO28630Q6UXU0 137 aa11.31□□□□□ -0.6
TRAFD1-201ENST00000257604 ZNF502Q8TBZ5 544 aa11.31□□□□□ -0.6
TRAFD1-201ENST00000257604 ZNF469Q96JG9 3925 aaPredicted RBP11.31□□□□□ -0.6
TRAFD1-201ENST00000257604 NACAE9PAV3 2078 aa11.31□□□□□ -0.6
TRAFD1-201ENST00000257604 DEFB125Q8N687 156 aa11.3□□□□□ -0.6
TRAFD1-201ENST00000257604 C18orf15Q96N68 181 aa11.3□□□□□ -0.6
TRAFD1-201ENST00000257604 SCRT2Q9NQ03 307 aa11.3□□□□□ -0.6
TRAFD1-201ENST00000257604 BEX4Q9NWD9 120 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-201ENST00000257604 SMAD5-AS1Q9Y6J3 95 aa11.3□□□□□ -0.6
TRAFD1-201ENST00000257604 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-201ENST00000257604 IGLV2-11P01706 119 aa11.3□□□□□ -0.6
TRAFD1-201ENST00000257604 PSG3Q16557 428 aa11.3□□□□□ -0.6
TRAFD1-201ENST00000257604 PRSS22Q9GZN4 317 aa11.3□□□□□ -0.6
TRAFD1-201ENST00000257604 GAGE12BA1L429 117 aa11.3□□□□□ -0.6
TRAFD1-201ENST00000257604 CRXO43186 299 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-201ENST00000257604 OR5AL1P0C617 328 aa11.3□□□□□ -0.6
TRAFD1-201ENST00000257604 KHDC1LQ5JSQ8 128 aa11.3□□□□□ -0.6
TRAFD1-201ENST00000257604 METTL26Q96S19 204 aa11.3□□□□□ -0.6
TRAFD1-201ENST00000257604 C19orf71A6NCJ1 209 aa11.29□□□□□ -0.6
TRAFD1-201ENST00000257604 EDN2P20800 178 aa11.29□□□□□ -0.6
TRAFD1-201ENST00000257604 CHCHD1Q96BP2 118 aaKnown RBP11.29□□□□□ -0.6
TRAFD1-201ENST00000257604 H3BUT2 72 aa11.29□□□□□ -0.6
TRAFD1-201ENST00000257604 IFI27P40305 119 aaPredicted RBP11.29□□□□□ -0.6
TRAFD1-201ENST00000257604 Q6ZQT7 251 aa11.29□□□□□ -0.6
TRAFD1-201ENST00000257604 TMEM14CQ9P0S9 112 aa11.29□□□□□ -0.6
TRAFD1-201ENST00000257604 FN1P02751 2386 aaKnown RBP11.29□□□□□ -0.6
TRAFD1-201ENST00000257604 C7orf71A4D174 169 aa11.28□□□□□ -0.6
TRAFD1-201ENST00000257604 NMUP48645 174 aa11.28□□□□□ -0.6
TRAFD1-201ENST00000257604 CRIP1P50238 77 aa11.28□□□□□ -0.6
TRAFD1-201ENST00000257604 C12orf54Q6X4T0 127 aa11.28□□□□□ -0.6
TRAFD1-201ENST00000257604 C16orf92Q96LL3 132 aa11.28□□□□□ -0.6
TRAFD1-201ENST00000257604 HIVEP2P31629 2446 aa11.28□□□□□ -0.6
TRAFD1-201ENST00000257604 TMEM213A2RRL7 107 aa11.28□□□□□ -0.6
TRAFD1-201ENST00000257604 KLF12Q9Y4X4 402 aa11.28□□□□□ -0.6
TRAFD1-201ENST00000257604 FAM231BA6NCW3 169 aa11.28□□□□□ -0.6
TRAFD1-201ENST00000257604 C11orf44Q8N8P7 122 aa11.28□□□□□ -0.6
TRAFD1-201ENST00000257604 AP5S1Q9NUS5 200 aa11.28□□□□□ -0.6
TRAFD1-201ENST00000257604 FA2HQ7L5A8 372 aa11.27□□□□□ -0.6
TRAFD1-201ENST00000257604 FLNBO75369 2602 aaKnown RBP11.27□□□□□ -0.61
TRAFD1-201ENST00000257604 IGKV3-20P01619 116 aa11.27□□□□□ -0.61
TRAFD1-201ENST00000257604 TMEM189A5PLL7 270 aa11.26□□□□□ -0.61
TRAFD1-201ENST00000257604 BMI1P35226 326 aa11.26□□□□□ -0.61
TRAFD1-201ENST00000257604 F6UB75 175 aa11.26□□□□□ -0.61
TRAFD1-201ENST00000257604 BUB3O43684 328 aa11.26□□□□□ -0.61
TRAFD1-201ENST00000257604 ZNF80P51504 273 aaPredicted RBP11.26□□□□□ -0.61
TRAFD1-201ENST00000257604 OR4X2Q8NGF9 303 aa11.26□□□□□ -0.61
TRAFD1-201ENST00000257604 AP1S3Q96PC3 154 aa11.26□□□□□ -0.61
TRAFD1-201ENST00000257604 HSPB8Q9UJY1 196 aa11.26□□□□□ -0.61
TRAFD1-201ENST00000257604 NIPBLQ6KC79 2804 aaeCLIP11.26□□□□□ -0.61
TRAFD1-201ENST00000257604 GAGE10A6NGK3 116 aa11.26□□□□□ -0.61
TRAFD1-201ENST00000257604 MRPS12O15235 138 aaKnown RBP11.26□□□□□ -0.61
TRAFD1-201ENST00000257604 SH2D1AO60880 128 aa11.26□□□□□ -0.61
TRAFD1-201ENST00000257604 CACNG7P62955 275 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms