RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 MIR17HGQ75NE6 70 aa3.58□□□□□ -1.84
TCN1-201ENST00000257264 TCF23Q7RTU1 214 aa3.58□□□□□ -1.84
TCN1-201ENST00000257264 FDCSPQ8NFU4 85 aa3.58□□□□□ -1.84
TCN1-201ENST00000257264 FAM222BQ8WU58 562 aa3.58□□□□□ -1.84
TCN1-201ENST00000257264 STARD4Q96DR4 205 aa3.58□□□□□ -1.84
TCN1-201ENST00000257264 ZNF714Q96N38 554 aa3.58□□□□□ -1.84
TCN1-201ENST00000257264 SNHG12Q9BXW3 62 aa3.58□□□□□ -1.84
TCN1-201ENST00000257264 LINC00574Q9H8X3 128 aa3.58□□□□□ -1.84
TCN1-201ENST00000257264 CBLN4Q9NTU7 201 aa3.58□□□□□ -1.84
TCN1-201ENST00000257264 V9GYV3 84 aa3.58□□□□□ -1.84
TCN1-201ENST00000257264 USF3Q68DE3 2245 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 DIDO1Q9BTC0 2240 aaKnown RBP3.57□□□□□ -1.84
TCN1-201ENST00000257264 SPEGQ15772 3267 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 IGLV3-9A0A075B6K5 115 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 TEX50A0A1B0GTY4 177 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 C20orf202A1L168 122 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 PGPA6NDG6 321 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 INS-IGF2F8WCM5 200 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 COX7A2P2O60397 106 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 IGHV3-7P01780 117 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 GPX1P07203 203 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 CGB3P0DN86 165 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 CGB7P0DN87 165 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 CTRLP40313 264 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 GNG10P50151 68 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 KRTDAPP60985 99 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 UBE2G1P62253 170 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 UBE2L3P68036 154 aaKnown RBP3.57□□□□□ -1.84
TCN1-201ENST00000257264 MEF2CQ06413 473 aaPredicted RBP3.57□□□□□ -1.84
TCN1-201ENST00000257264 PMCHL1Q16048 86 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 COL5A1-AS1Q5SY13 56 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 C10orf113Q5VZT2 155 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 SPATA31B1PQ5VZV4 182 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 CYB5R2Q6BCY4 276 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 SSX8Q7RTT4 187 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 PDPNQ86YL7 162 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 MUC15Q8N387 334 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 OR4C13Q8NGP0 309 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 CCL17Q92583 94 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 FAM103A1Q9BTL3 118 aaKnown RBP3.57□□□□□ -1.84
TCN1-201ENST00000257264 ZNF430Q9H8G1 570 aaPredicted RBP3.57□□□□□ -1.84
TCN1-201ENST00000257264 MRPL27Q9P0M9 148 aaKnown RBP3.57□□□□□ -1.84
TCN1-201ENST00000257264 UQCR10Q9UDW1 63 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 RPUSD1Q9UJJ7 312 aaKnown RBP3.57□□□□□ -1.84
TCN1-201ENST00000257264 LINC00312Q9Y6C7 94 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 GTF3C1Q12789 2109 aa3.57□□□□□ -1.84
TCN1-201ENST00000257264 TANC2Q9HCD6 1990 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 LOC389332A0A1B0GUA5 103 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 CD5LO43866 347 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 ZNF324O75467 553 aaPredicted RBP3.56□□□□□ -1.84
TCN1-201ENST00000257264 LINC00614P0C842 121 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 SAA1P0DJI8 122 aaPredicted RBP3.56□□□□□ -1.84
TCN1-201ENST00000257264 RNASE2P10153 161 aaKnown RBP3.56□□□□□ -1.84
TCN1-201ENST00000257264 ZNF25P17030 456 aaPredicted RBP3.56□□□□□ -1.84
TCN1-201ENST00000257264 UBE2AP49459 152 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 VMA21Q3ZAQ7 101 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 SPATA45Q537H7 98 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 TCTEX1D4Q5JR98 221 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 TEX36Q5VZQ5 186 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 TMEM136Q6ZRR5 245 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 ZNF833PQ6ZTB9 187 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 ATP5L2Q7Z4Y8 100 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 DOLPP1Q86YN1 238 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 DEFB123Q8N688 67 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 ZNF439Q8NDP4 499 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 OR10X1Q8NGY0 326 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 LEAP2Q969E1 77 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 GAFA1Q96PS6 74 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 CHAC1Q9BUX1 264 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 RNASE7Q9H1E1 156 aaKnown RBP3.56□□□□□ -1.84
TCN1-201ENST00000257264 FBXL15Q9H469 300 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 NDUFA4L2Q9NRX3 87 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 AMMECR1Q9Y4X0 333 aaPredicted RBP3.56□□□□□ -1.84
TCN1-201ENST00000257264 INSIG2Q9Y5U4 225 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 SOX21Q9Y651 276 aaPredicted RBP3.56□□□□□ -1.84
TCN1-201ENST00000257264 MED13Q9UHV7 2174 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 TET2Q6N021 2002 aaPredicted RBP3.56□□□□□ -1.84
TCN1-201ENST00000257264 FRYLO94915 3013 aa3.56□□□□□ -1.84
TCN1-201ENST00000257264 IGHV3-66A0A0C4DH42 116 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 A0A0U1RQV1 116 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 TCRBV4S1A1TA0A5B7 111 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 FAM168BA1KXE4 195 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 DPRXA6NFQ7 191 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 KRTAP29-1A8MX34 341 aaPredicted RBP3.55□□□□□ -1.84
TCN1-201ENST00000257264 GGTLC3B5MD39 225 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 CORTO00230 105 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 NUPR1O60356 82 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 IGKV3-20P01619 116 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 G0S2P27469 103 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 SRIP30626 198 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 CA7P43166 264 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 TCL1AP56279 114 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 FXYD3Q14802 87 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 C9orf129Q5T035 196 aaKnown RBP3.55□□□□□ -1.84
TCN1-201ENST00000257264 MRPL54Q6P161 138 aaKnown RBP3.55□□□□□ -1.84
TCN1-201ENST00000257264 ST6GALNAC3Q8NDV1 305 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 DEFB108BQ8NET1 73 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 TMEM167AQ8TBQ9 72 aa3.55□□□□□ -1.84
TCN1-201ENST00000257264 SRSF12Q8WXF0 261 aaKnown RBP3.55□□□□□ -1.84
TCN1-201ENST00000257264 IGF2BP2-AS1Q96M15 143 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms