RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 NDUFS8O00217 210 aa7.21□□□□□ -1.25
RPA1-201ENST00000254719 SRSF1Q07955 248 aaKnown RBP eCLIP7.21□□□□□ -1.25
RPA1-201ENST00000254719 Q1RN00 199 aa7.21□□□□□ -1.25
RPA1-201ENST00000254719 C16orf54Q6UWD8 224 aa7.21□□□□□ -1.25
RPA1-201ENST00000254719 EXOC3-AS1Q8N2X6 119 aa7.21□□□□□ -1.25
RPA1-201ENST00000254719 RAXQ9Y2V3 346 aa7.21□□□□□ -1.25
RPA1-201ENST00000254719 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.21□□□□□ -1.26
RPA1-201ENST00000254719 IGHG4P01861 327 aa7.21□□□□□ -1.26
RPA1-201ENST00000254719 SMIM13P0DJ93 91 aa7.21□□□□□ -1.26
RPA1-201ENST00000254719 C15orf32Q32M92 178 aa7.21□□□□□ -1.26
RPA1-201ENST00000254719 WFDC3Q8IUB2 231 aa7.21□□□□□ -1.26
RPA1-201ENST00000254719 TTC9CQ8N5M4 171 aa7.21□□□□□ -1.26
RPA1-201ENST00000254719 HAX1O00165 279 aa7.21□□□□□ -1.26
RPA1-201ENST00000254719 SNCGO76070 127 aa7.21□□□□□ -1.26
RPA1-201ENST00000254719 H3BRN7 92 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 SYS1-DBNDD2H3BUS1 97 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 K7EP13 123 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 IGLC1P0CG04 106 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 EGR2P11161 476 aaPredicted RBP7.2□□□□□ -1.26
RPA1-201ENST00000254719 LEPP41159 167 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 COPS9Q8WXC6 57 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 IGKV3-7A0A075B6H7 116 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 CTRLP40313 264 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 OCIAD2Q56VL3 154 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 FAM120AOSQ5T036 256 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 CREBBPQ92793 2442 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 NPFFO15130 113 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 GP9P14770 177 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 RAX2Q96IS3 184 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 AGRNO00468 2067 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 DPM2O94777 84 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 IGHV3-23P01764 117 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 RPL13AP40429 203 aaKnown RBP7.2□□□□□ -1.26
RPA1-201ENST00000254719 RPL24P83731 157 aaKnown RBP7.2□□□□□ -1.26
RPA1-201ENST00000254719 PRSS57Q6UWY2 283 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 SIGLEC15Q6ZMC9 328 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 HIST1H4GQ99525 98 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 S4R3C0 116 aa7.2□□□□□ -1.26
RPA1-201ENST00000254719 IGHV3-35A0A0C4DH35 117 aa7.19□□□□□ -1.26
RPA1-201ENST00000254719 HSD52Q0P140 79 aa7.19□□□□□ -1.26
RPA1-201ENST00000254719 KLF5Q13887 457 aaPredicted RBP7.19□□□□□ -1.26
RPA1-201ENST00000254719 NPFFR1Q9GZQ6 430 aa7.19□□□□□ -1.26
RPA1-201ENST00000254719 FAM208BQ5VWN6 2430 aa7.19□□□□□ -1.26
RPA1-201ENST00000254719 C7orf71A4D174 169 aa7.19□□□□□ -1.26
RPA1-201ENST00000254719 SH2D1AO60880 128 aa7.19□□□□□ -1.26
RPA1-201ENST00000254719 CDKN1BP46527 198 aa7.19□□□□□ -1.26
RPA1-201ENST00000254719 LY6EQ16553 131 aa7.19□□□□□ -1.26
RPA1-201ENST00000254719 LYZL1Q6UWQ5 148 aa7.19□□□□□ -1.26
RPA1-201ENST00000254719 OR11H6Q8NGC7 330 aa7.19□□□□□ -1.26
RPA1-201ENST00000254719 SCGB3A1Q96QR1 104 aa7.19□□□□□ -1.26
RPA1-201ENST00000254719 ACACBO00763 2458 aa7.19□□□□□ -1.26
RPA1-201ENST00000254719 TMEM238C9JI98 176 aa7.19□□□□□ -1.26
RPA1-201ENST00000254719 I3L2K1 104 aa7.19□□□□□ -1.26
RPA1-201ENST00000254719 GATA3P23771 443 aa7.19□□□□□ -1.26
RPA1-201ENST00000254719 FBXL19-AS1Q494R0 122 aa7.19□□□□□ -1.26
RPA1-201ENST00000254719 GTSF1Q8WW33 167 aa7.18□□□□□ -1.26
RPA1-201ENST00000254719 CITED2Q99967 270 aaPredicted RBP7.18□□□□□ -1.26
RPA1-201ENST00000254719 GAGE12BA1L429 117 aa7.18□□□□□ -1.26
RPA1-201ENST00000254719 LTAP01374 205 aa7.18□□□□□ -1.26
RPA1-201ENST00000254719 NDPQ00604 133 aa7.18□□□□□ -1.26
RPA1-201ENST00000254719 ZNF502Q8TBZ5 544 aa7.18□□□□□ -1.26
RPA1-201ENST00000254719 ORAOV1Q8WV07 137 aa7.18□□□□□ -1.26
RPA1-201ENST00000254719 CRIP1P50238 77 aa7.18□□□□□ -1.26
RPA1-201ENST00000254719 FOXC2Q99958 501 aa7.18□□□□□ -1.26
RPA1-201ENST00000254719 PRSS22Q9GZN4 317 aa7.18□□□□□ -1.26
RPA1-201ENST00000254719 TRBV6-1A0A0K0K1D8 114 aa7.18□□□□□ -1.26
RPA1-201ENST00000254719 KLF12Q9Y4X4 402 aa7.18□□□□□ -1.26
RPA1-201ENST00000254719 M0R3E3 92 aa7.17□□□□□ -1.26
RPA1-201ENST00000254719 ZFP36P26651 326 aaKnown RBP7.17□□□□□ -1.26
RPA1-201ENST00000254719 PIP4P2Q8N4L2 257 aa7.17□□□□□ -1.26
RPA1-201ENST00000254719 A0A1B0GXF2 115 aa7.17□□□□□ -1.26
RPA1-201ENST00000254719 ODF3BA8MYP8 253 aa7.17□□□□□ -1.26
RPA1-201ENST00000254719 D6R8Y8 96 aa7.17□□□□□ -1.26
RPA1-201ENST00000254719 M0R381 172 aa7.17□□□□□ -1.26
RPA1-201ENST00000254719 IGKV1-17P01599 117 aa7.17□□□□□ -1.26
RPA1-201ENST00000254719 COX6CP09669 75 aa7.17□□□□□ -1.26
RPA1-201ENST00000254719 LGALS3P17931 250 aaKnown RBP7.17□□□□□ -1.26
RPA1-201ENST00000254719 KLRD1Q13241 179 aa7.17□□□□□ -1.26
RPA1-201ENST00000254719 OR5A1Q8NGJ0 315 aa7.17□□□□□ -1.26
RPA1-201ENST00000254719 TTTY13Q9BZ97 58 aa7.17□□□□□ -1.26
RPA1-201ENST00000254719 GTSF1LQ9H1H1 148 aa7.17□□□□□ -1.26
RPA1-201ENST00000254719 TMEM160Q9NX00 188 aa7.17□□□□□ -1.26
RPA1-201ENST00000254719 TAX1BP3O14907 124 aa7.17□□□□□ -1.26
RPA1-201ENST00000254719 PSMB2P49721 201 aa7.17□□□□□ -1.26
RPA1-201ENST00000254719 MRPL53Q96EL3 112 aaKnown RBP7.17□□□□□ -1.26
RPA1-201ENST00000254719 ATP6V0BQ99437 205 aa7.17□□□□□ -1.26
RPA1-201ENST00000254719 IGKV2-40A0A087WW87 121 aaPredicted RBP7.16□□□□□ -1.26
RPA1-201ENST00000254719 IGHV2-70DA0A0C4DH43 119 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 C19orf71A6NCJ1 209 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 B4DSR2 109 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 K7EIM0 57 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 IGKV2D-40P01614 121 aaPredicted RBP7.16□□□□□ -1.26
RPA1-201ENST00000254719 FAM104BQ5XKR9 115 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 NPBQ8NG41 125 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 PEMTQ9UBM1 199 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 NDUFS7O75251 213 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 IGKCP01834 107 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 LAGE3Q14657 143 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 LCNL1Q6ZST4 164 aa7.16□□□□□ -1.26
RPA1-201ENST00000254719 CYSLTR1Q9Y271 337 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms