RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 H3BUX3 64 aa12.18□□□□□ -0.46
LRFN1-201ENST00000248668 LINC00173Q6ZV60 143 aa12.18□□□□□ -0.46
LRFN1-201ENST00000248668 MOB4Q9Y3A3 225 aa12.18□□□□□ -0.46
LRFN1-201ENST00000248668 TRAV41A0A0B4J266 112 aa12.17□□□□□ -0.46
LRFN1-201ENST00000248668 A1L4Q6 167 aa12.17□□□□□ -0.46
LRFN1-201ENST00000248668 TMEM189A5PLL7 270 aa12.17□□□□□ -0.46
LRFN1-201ENST00000248668 TRBV12-3P01733 135 aa12.17□□□□□ -0.46
LRFN1-201ENST00000248668 TRGV3P03979 118 aa12.17□□□□□ -0.46
LRFN1-201ENST00000248668 Q6ZS46 218 aa12.17□□□□□ -0.46
LRFN1-201ENST00000248668 EEF1AKMT3Q96AZ1 226 aa12.17□□□□□ -0.46
LRFN1-201ENST00000248668 CLPSL1A2RUU4 121 aa12.17□□□□□ -0.46
LRFN1-201ENST00000248668 BUB3O43684 328 aa12.17□□□□□ -0.46
LRFN1-201ENST00000248668 BVES-AS1Q5T3Y7 98 aa12.17□□□□□ -0.46
LRFN1-201ENST00000248668 LYZL1Q6UWQ5 148 aa12.17□□□□□ -0.46
LRFN1-201ENST00000248668 PRR25Q96S07 402 aa12.17□□□□□ -0.46
LRFN1-201ENST00000248668 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.16□□□□□ -0.46
LRFN1-201ENST00000248668 FAM181BA6NEQ2 426 aa12.16□□□□□ -0.46
LRFN1-201ENST00000248668 AZU1P20160 251 aa12.16□□□□□ -0.46
LRFN1-201ENST00000248668 BLCAPP62952 87 aa12.16□□□□□ -0.46
LRFN1-201ENST00000248668 ATP5G2Q06055 141 aa12.16□□□□□ -0.46
LRFN1-201ENST00000248668 KLF5Q13887 457 aaPredicted RBP12.16□□□□□ -0.46
LRFN1-201ENST00000248668 TRAV26-1A0A087WT03 109 aa12.16□□□□□ -0.46
LRFN1-201ENST00000248668 FOXE3Q13461 319 aa12.16□□□□□ -0.46
LRFN1-201ENST00000248668 A0A1B0GV72 72 aa12.15□□□□□ -0.46
LRFN1-201ENST00000248668 AVPP01185 164 aa12.15□□□□□ -0.46
LRFN1-201ENST00000248668 PPIFP30405 207 aaKnown RBP12.15□□□□□ -0.46
LRFN1-201ENST00000248668 IGKV3-7A0A075B6H7 116 aa12.15□□□□□ -0.46
LRFN1-201ENST00000248668 HAX1O00165 279 aa12.15□□□□□ -0.46
LRFN1-201ENST00000248668 FAM162BQ5T6X4 162 aa12.15□□□□□ -0.46
LRFN1-201ENST00000248668 HIF1ANQ9NWT6 349 aa12.15□□□□□ -0.46
LRFN1-201ENST00000248668 ORM1P02763 201 aa12.15□□□□□ -0.47
LRFN1-201ENST00000248668 RAB9AP51151 201 aa12.15□□□□□ -0.47
LRFN1-201ENST00000248668 GTF2H5Q6ZYL4 71 aa12.15□□□□□ -0.47
LRFN1-201ENST00000248668 TRBV6-1A0A0K0K1D8 114 aa12.14□□□□□ -0.47
LRFN1-201ENST00000248668 OR4C46A6NHA9 309 aa12.14□□□□□ -0.47
LRFN1-201ENST00000248668 RIGQ13278 110 aa12.14□□□□□ -0.47
LRFN1-201ENST00000248668 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.14□□□□□ -0.47
LRFN1-201ENST00000248668 FAM231BA6NCW3 169 aa12.14□□□□□ -0.47
LRFN1-201ENST00000248668 LOC389332A0A1B0GUA5 103 aa12.13□□□□□ -0.47
LRFN1-201ENST00000248668 J3KRW8 73 aa12.13□□□□□ -0.47
LRFN1-201ENST00000248668 IL17RELQ6ZVW7 336 aa12.13□□□□□ -0.47
LRFN1-201ENST00000248668 METTL26Q96S19 204 aa12.13□□□□□ -0.47
LRFN1-201ENST00000248668 KLK15Q9H2R5 256 aa12.13□□□□□ -0.47
LRFN1-201ENST00000248668 HECTD1Q9ULT8 2610 aa12.13□□□□□ -0.47
LRFN1-201ENST00000248668 H3BUT2 72 aa12.13□□□□□ -0.47
LRFN1-201ENST00000248668 DEFB125Q8N687 156 aa12.13□□□□□ -0.47
LRFN1-201ENST00000248668 IGHV1-24A0A0C4DH33 117 aa12.13□□□□□ -0.47
LRFN1-201ENST00000248668 MSMBP08118 114 aa12.13□□□□□ -0.47
LRFN1-201ENST00000248668 TMEM95Q3KNT9 176 aa12.13□□□□□ -0.47
LRFN1-201ENST00000248668 UNQ9165/PRO28630Q6UXU0 137 aa12.13□□□□□ -0.47
LRFN1-201ENST00000248668 AMN1Q8IY45 258 aa12.13□□□□□ -0.47
LRFN1-201ENST00000248668 DEFB1P60022 68 aa12.12□□□□□ -0.47
LRFN1-201ENST00000248668 C7orf71A4D174 169 aa12.12□□□□□ -0.47
LRFN1-201ENST00000248668 PF4V1P10720 104 aa12.12□□□□□ -0.47
LRFN1-201ENST00000248668 FXYD7P58549 80 aa12.12□□□□□ -0.47
LRFN1-201ENST00000248668 Q6ZQT7 251 aa12.12□□□□□ -0.47
LRFN1-201ENST00000248668 SMKR1H3BMG3 65 aa12.12□□□□□ -0.47
LRFN1-201ENST00000248668 ARL3P36405 182 aa12.12□□□□□ -0.47
LRFN1-201ENST00000248668 CRYBA4P53673 196 aa12.12□□□□□ -0.47
LRFN1-201ENST00000248668 TRBV7-1A0A0A6YYK4 115 aa12.11□□□□□ -0.47
LRFN1-201ENST00000248668 C2orf70A6NJV1 201 aa12.11□□□□□ -0.47
LRFN1-201ENST00000248668 MSRB1Q9NZV6 116 aa12.11□□□□□ -0.47
LRFN1-201ENST00000248668 CKS1BP61024 79 aa12.1□□□□□ -0.47
LRFN1-201ENST00000248668 TWIST1Q15672 202 aa12.1□□□□□ -0.47
LRFN1-201ENST00000248668 BBC3Q96PG8 261 aaPredicted RBP12.1□□□□□ -0.47
LRFN1-201ENST00000248668 D6R8Y8 96 aa12.1□□□□□ -0.47
LRFN1-201ENST00000248668 RPL11P62913 178 aaKnown RBP12.1□□□□□ -0.47
LRFN1-201ENST00000248668 FAM106AQ4KMX7 169 aa12.1□□□□□ -0.47
LRFN1-201ENST00000248668 SLC25A34Q6PIV7 304 aa12.1□□□□□ -0.47
LRFN1-201ENST00000248668 C8orf86Q6ZUL3 223 aa12.1□□□□□ -0.47
LRFN1-201ENST00000248668 NDFIP1Q9BT67 221 aa12.1□□□□□ -0.47
LRFN1-201ENST00000248668 PEF1Q9UBV8 284 aaKnown RBP12.1□□□□□ -0.47
LRFN1-201ENST00000248668 LEPROTL1O95214 131 aa12.09□□□□□ -0.47
LRFN1-201ENST00000248668 NCR2O95944 276 aa12.09□□□□□ -0.47
LRFN1-201ENST00000248668 SORL1Q92673 2214 aa12.09□□□□□ -0.47
LRFN1-201ENST00000248668 SMAD7O15105 426 aaKnown RBP12.09□□□□□ -0.47
LRFN1-201ENST00000248668 AGPAT4-IT1Q9H0P7 198 aa12.09□□□□□ -0.47
LRFN1-201ENST00000248668 MXRA5Q9NR99 2828 aa12.09□□□□□ -0.47
LRFN1-201ENST00000248668 TRAV8-2A0A0B4J237 113 aa12.09□□□□□ -0.47
LRFN1-201ENST00000248668 TM4SF20Q53R12 229 aa12.09□□□□□ -0.47
LRFN1-201ENST00000248668 PRSS3P2Q8NHM4 247 aa12.09□□□□□ -0.47
LRFN1-201ENST00000248668 C16orf92Q96LL3 132 aa12.08□□□□□ -0.48
LRFN1-201ENST00000248668 TMEM70Q9BUB7 260 aa12.08□□□□□ -0.48
LRFN1-201ENST00000248668 G3V4G9 280 aa12.08□□□□□ -0.48
LRFN1-201ENST00000248668 IFI27P40305 119 aaPredicted RBP12.07□□□□□ -0.48
LRFN1-201ENST00000248668 LOXL1Q08397 574 aaPredicted RBP12.07□□□□□ -0.48
LRFN1-201ENST00000248668 TEX15Q9BXT5 2789 aa12.07□□□□□ -0.48
LRFN1-201ENST00000248668 SRD5A1P18405 259 aa12.07□□□□□ -0.48
LRFN1-201ENST00000248668 ATP6V0BQ99437 205 aa12.07□□□□□ -0.48
LRFN1-201ENST00000248668 SIGMAR1Q99720 223 aa12.07□□□□□ -0.48
LRFN1-201ENST00000248668 C12orf54Q6X4T0 127 aa12.06□□□□□ -0.48
LRFN1-201ENST00000248668 IGF1P05019 195 aa12.06□□□□□ -0.48
LRFN1-201ENST00000248668 RPS20P60866 119 aaKnown RBP12.06□□□□□ -0.48
LRFN1-201ENST00000248668 C19orf54Q5BKX5 351 aa12.06□□□□□ -0.48
LRFN1-201ENST00000248668 FA2HQ7L5A8 372 aa12.06□□□□□ -0.48
LRFN1-201ENST00000248668 A6NDX4 124 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 FABP5P3A8MUU1 101 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 B4DSR2 109 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 SPRY2O43597 315 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 EDN2P20800 178 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms