RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 A0A0J9YX75 114 aa10.62□□□□□ -0.71
SDF2-201ENST00000247020 OR4C46A6NHA9 309 aa10.62□□□□□ -0.71
SDF2-201ENST00000247020 TFPI2P48307 235 aa10.62□□□□□ -0.71
SDF2-201ENST00000247020 EBLN2Q6P2I7 272 aa10.62□□□□□ -0.71
SDF2-201ENST00000247020 TMEM61Q8N0U2 210 aa10.62□□□□□ -0.71
SDF2-201ENST00000247020 ZFP82Q8N141 532 aa10.62□□□□□ -0.71
SDF2-201ENST00000247020 A0A1B0GW15 77 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 A0A1B0GXF2 115 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 HIST1H2BKO60814 126 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 S100A6P06703 90 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 HIST1H2BJP06899 126 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 HIST1H2BOP23527 126 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 HIST1H2BBP33778 126 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 HIST1H2BDP58876 126 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 KRTAP10-3P60369 221 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 HIST1H2BCP62807 126 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 HIST2H2BEQ16778 126 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.61□□□□□ -0.71
SDF2-201ENST00000247020 ZFAND2AQ8N6M9 145 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 FRZBQ92765 325 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 HIST1H2BHQ93079 126 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 HIST1H2BNQ99877 126 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 HIST1H2BMQ99879 126 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 BAHCC1Q9P281 2608 aa10.61□□□□□ -0.71
SDF2-201ENST00000247020 TRAV21A0A0B4J279 112 aa10.6□□□□□ -0.71
SDF2-201ENST00000247020 LOC105371267A0A1B0GV96 52 aa10.6□□□□□ -0.71
SDF2-201ENST00000247020 SNURFLB1AK76 121 aa10.6□□□□□ -0.71
SDF2-201ENST00000247020 TRGC1P0CF51 173 aa10.6□□□□□ -0.71
SDF2-201ENST00000247020 ZNF705DP0CH99 300 aaPredicted RBP10.6□□□□□ -0.71
SDF2-201ENST00000247020 ZNF705BP0CI00 300 aaPredicted RBP10.6□□□□□ -0.71
SDF2-201ENST00000247020 HBBP68871 147 aa10.6□□□□□ -0.71
SDF2-201ENST00000247020 NSUN5P1Q3KNT7 163 aa10.6□□□□□ -0.71
SDF2-201ENST00000247020 HIST2H2BDQ6DRA6 164 aa10.6□□□□□ -0.71
SDF2-201ENST00000247020 MRPL54Q6P161 138 aaKnown RBP10.6□□□□□ -0.71
SDF2-201ENST00000247020 SELENOKQ9Y6D0 94 aa10.6□□□□□ -0.71
SDF2-201ENST00000247020 FLNBO75369 2602 aaKnown RBP10.6□□□□□ -0.71
SDF2-201ENST00000247020 SETXQ7Z333 2677 aaKnown RBP10.6□□□□□ -0.71
SDF2-201ENST00000247020 A8MTW9 85 aa10.6□□□□□ -0.71
SDF2-201ENST00000247020 KLLNB2CW77 178 aa10.6□□□□□ -0.71
SDF2-201ENST00000247020 F6UB75 175 aa10.6□□□□□ -0.71
SDF2-201ENST00000247020 S100A8P05109 93 aa10.6□□□□□ -0.71
SDF2-201ENST00000247020 LEPP41159 167 aa10.6□□□□□ -0.71
SDF2-201ENST00000247020 FABP9Q0Z7S8 132 aa10.6□□□□□ -0.71
SDF2-201ENST00000247020 CD300EQ496F6 205 aaPredicted RBP10.6□□□□□ -0.71
SDF2-201ENST00000247020 TMEM136Q6ZRR5 245 aa10.6□□□□□ -0.71
SDF2-201ENST00000247020 BORCS7Q96B45 105 aa10.6□□□□□ -0.71
SDF2-201ENST00000247020 A0A1B0GUT8 65 aa10.59□□□□□ -0.71
SDF2-201ENST00000247020 ORM1P02763 201 aa10.59□□□□□ -0.71
SDF2-201ENST00000247020 GPX1P07203 203 aa10.59□□□□□ -0.71
SDF2-201ENST00000247020 RIGQ13278 110 aa10.59□□□□□ -0.71
SDF2-201ENST00000247020 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.59□□□□□ -0.71
SDF2-201ENST00000247020 PGLYRP4Q96LB8 373 aa10.59□□□□□ -0.71
SDF2-201ENST00000247020 MRPL18Q9H0U6 180 aaKnown RBP10.59□□□□□ -0.71
SDF2-201ENST00000247020 F8P00451 2351 aa10.58□□□□□ -0.72
SDF2-201ENST00000247020 C5orf52A6NGY3 159 aa10.58□□□□□ -0.72
SDF2-201ENST00000247020 SPINK4O60575 86 aa10.58□□□□□ -0.72
SDF2-201ENST00000247020 IGLC6P0CF74 106 aa10.58□□□□□ -0.72
SDF2-201ENST00000247020 GZMBP10144 247 aa10.58□□□□□ -0.72
SDF2-201ENST00000247020 TSPOP30536 169 aa10.58□□□□□ -0.72
SDF2-201ENST00000247020 CTRLP40313 264 aa10.58□□□□□ -0.72
SDF2-201ENST00000247020 CMC4P56277 68 aaPredicted RBP10.58□□□□□ -0.72
SDF2-201ENST00000247020 GATD1Q8NB37 220 aa10.58□□□□□ -0.72
SDF2-201ENST00000247020 ZNF256Q9Y2P7 627 aaPredicted RBP10.58□□□□□ -0.72
SDF2-201ENST00000247020 F2Z2F3 143 aa10.57□□□□□ -0.72
SDF2-201ENST00000247020 IGLV1-51P01701 117 aa10.57□□□□□ -0.72
SDF2-201ENST00000247020 PF4P02776 101 aa10.57□□□□□ -0.72
SDF2-201ENST00000247020 HLA-DRB4P13762 266 aa10.57□□□□□ -0.72
SDF2-201ENST00000247020 DEFB1P60022 68 aa10.57□□□□□ -0.72
SDF2-201ENST00000247020 GDF5OSQ5U4N7 250 aa10.57□□□□□ -0.72
SDF2-201ENST00000247020 FER1L6-AS1Q8NA97 138 aa10.57□□□□□ -0.72
SDF2-201ENST00000247020 CITED1Q99966 193 aa10.57□□□□□ -0.72
SDF2-201ENST00000247020 CNFNQ9BYD5 112 aa10.57□□□□□ -0.72
SDF2-201ENST00000247020 HLA-DRB4X5D2U9 266 aa10.57□□□□□ -0.72
SDF2-201ENST00000247020 IGKV3D-20A0A0C4DH25 116 aa10.56□□□□□ -0.72
SDF2-201ENST00000247020 DEFB131AP59861 70 aa10.56□□□□□ -0.72
SDF2-201ENST00000247020 PRR9Q5T870 116 aa10.56□□□□□ -0.72
SDF2-201ENST00000247020 CLUHP3Q96NS8 147 aa10.56□□□□□ -0.72
SDF2-201ENST00000247020 FAM110AQ9BQ89 295 aa10.56□□□□□ -0.72
SDF2-201ENST00000247020 MAP6D1Q9H9H5 199 aa10.56□□□□□ -0.72
SDF2-201ENST00000247020 C2CD3Q4AC94 2353 aa10.56□□□□□ -0.72
SDF2-201ENST00000247020 SAP30O75446 220 aa10.56□□□□□ -0.72
SDF2-201ENST00000247020 RAB4BP61018 213 aa10.56□□□□□ -0.72
SDF2-201ENST00000247020 DNLZQ5SXM8 178 aa10.56□□□□□ -0.72
SDF2-201ENST00000247020 ZNF575Q86XF7 245 aa10.56□□□□□ -0.72
SDF2-201ENST00000247020 LINC00482Q8N8I6 264 aa10.56□□□□□ -0.72
SDF2-201ENST00000247020 TMSB15BA0A087X1C1 80 aa10.55□□□□□ -0.72
SDF2-201ENST00000247020 UBE2CO00762 179 aa10.55□□□□□ -0.72
SDF2-201ENST00000247020 ARMS2P0C7Q2 107 aa10.55□□□□□ -0.72
SDF2-201ENST00000247020 FRMD6-AS1P0C7T7 363 aa10.55□□□□□ -0.72
SDF2-201ENST00000247020 CDKN1BP46527 198 aa10.55□□□□□ -0.72
SDF2-201ENST00000247020 SNRPEP62304 92 aaKnown RBP10.55□□□□□ -0.72
SDF2-201ENST00000247020 COA6Q5JTJ3 125 aaKnown RBP10.55□□□□□ -0.72
SDF2-201ENST00000247020 LYZL1Q6UWQ5 148 aa10.55□□□□□ -0.72
SDF2-201ENST00000247020 C11orf21Q9P2W6 132 aa10.55□□□□□ -0.72
SDF2-201ENST00000247020 C7orf71A4D174 169 aa10.54□□□□□ -0.72
SDF2-201ENST00000247020 APCSP02743 223 aa10.54□□□□□ -0.72
SDF2-201ENST00000247020 OR5AL1P0C617 328 aa10.54□□□□□ -0.72
SDF2-201ENST00000247020 MED14OSP0DP75 135 aa10.54□□□□□ -0.72
SDF2-201ENST00000247020 CD33P20138 364 aa10.54□□□□□ -0.72
SDF2-201ENST00000247020 RNASE4P34096 147 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms