RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 LRRK2Q5S007 2527 aa11.54□□□□□ -0.56
DDX49-201ENST00000247003 PSMB8P28062 276 aa11.53□□□□□ -0.56
DDX49-201ENST00000247003 SAMD13Q5VXD3 122 aa11.53□□□□□ -0.56
DDX49-201ENST00000247003 LINC00477Q96M19 166 aa11.53□□□□□ -0.56
DDX49-201ENST00000247003 RHPN1-AS1Q9BWJ2 59 aa11.53□□□□□ -0.56
DDX49-201ENST00000247003 MAP1LC3CQ9BXW4 147 aa11.53□□□□□ -0.56
DDX49-201ENST00000247003 CNFNQ9BYD5 112 aa11.53□□□□□ -0.56
DDX49-201ENST00000247003 TMEM191AQ9H0A3 160 aa11.53□□□□□ -0.56
DDX49-201ENST00000247003 CKS2P33552 79 aa11.53□□□□□ -0.56
DDX49-201ENST00000247003 MRPL51Q4U2R6 128 aaKnown RBP11.53□□□□□ -0.56
DDX49-201ENST00000247003 UFC1Q9Y3C8 167 aa11.53□□□□□ -0.56
DDX49-201ENST00000247003 U3KQK5 164 aa11.53□□□□□ -0.56
DDX49-201ENST00000247003 J3QKU1 62 aa11.52□□□□□ -0.57
DDX49-201ENST00000247003 K7EMT4 169 aa11.52□□□□□ -0.57
DDX49-201ENST00000247003 M0R143 59 aa11.52□□□□□ -0.57
DDX49-201ENST00000247003 SMIM15Q7Z3B0 74 aa11.52□□□□□ -0.57
DDX49-201ENST00000247003 MRPL52Q86TS9 123 aaKnown RBP11.52□□□□□ -0.57
DDX49-201ENST00000247003 OR10AG1Q8NH19 301 aa11.52□□□□□ -0.57
DDX49-201ENST00000247003 ZFHX3Q15911 3703 aa11.52□□□□□ -0.57
DDX49-201ENST00000247003 SOCS3O14543 225 aa11.51□□□□□ -0.57
DDX49-201ENST00000247003 TM4SF20Q53R12 229 aa11.51□□□□□ -0.57
DDX49-201ENST00000247003 C20orf173Q96LM9 149 aa11.51□□□□□ -0.57
DDX49-201ENST00000247003 C2orf88Q9BSF0 95 aa11.51□□□□□ -0.57
DDX49-201ENST00000247003 CELSR2Q9HCU4 2923 aa11.51□□□□□ -0.57
DDX49-201ENST00000247003 IGKV3D-20A0A0C4DH25 116 aa11.51□□□□□ -0.57
DDX49-201ENST00000247003 SYS1-DBNDD2H3BUS1 97 aa11.51□□□□□ -0.57
DDX49-201ENST00000247003 PPBPP02775 128 aa11.51□□□□□ -0.57
DDX49-201ENST00000247003 GPHB5Q86YW7 130 aa11.51□□□□□ -0.57
DDX49-201ENST00000247003 LURAP1LQ8IV03 231 aa11.51□□□□□ -0.57
DDX49-201ENST00000247003 ATOH7Q8N100 152 aa11.51□□□□□ -0.57
DDX49-201ENST00000247003 UQCR10Q9UDW1 63 aa11.51□□□□□ -0.57
DDX49-201ENST00000247003 SMPXQ9UHP9 88 aa11.51□□□□□ -0.57
DDX49-201ENST00000247003 TIMM8BQ9Y5J9 83 aaPredicted RBP11.51□□□□□ -0.57
DDX49-201ENST00000247003 SPG11Q96JI7 2443 aa11.5□□□□□ -0.57
DDX49-201ENST00000247003 IGKV3-7A0A075B6H7 116 aa11.5□□□□□ -0.57
DDX49-201ENST00000247003 LOC389332A0A1B0GUA5 103 aa11.5□□□□□ -0.57
DDX49-201ENST00000247003 CRXO43186 299 aaPredicted RBP11.5□□□□□ -0.57
DDX49-201ENST00000247003 FSHBP01225 129 aa11.5□□□□□ -0.57
DDX49-201ENST00000247003 ID1P41134 155 aa11.5□□□□□ -0.57
DDX49-201ENST00000247003 KRTAP10-9P60411 292 aa11.5□□□□□ -0.57
DDX49-201ENST00000247003 FOXE3Q13461 319 aa11.5□□□□□ -0.57
DDX49-201ENST00000247003 Q6YL49 198 aa11.5□□□□□ -0.57
DDX49-201ENST00000247003 TRAV9-2A0A087WT02 112 aa11.49□□□□□ -0.57
DDX49-201ENST00000247003 IFI27P40305 119 aaPredicted RBP11.49□□□□□ -0.57
DDX49-201ENST00000247003 PET117Q6UWS5 81 aa11.49□□□□□ -0.57
DDX49-201ENST00000247003 SIGLEC8Q9NYZ4 499 aa11.49□□□□□ -0.57
DDX49-201ENST00000247003 LAMTOR2Q9Y2Q5 125 aa11.49□□□□□ -0.57
DDX49-201ENST00000247003 ANKRD17O75179 2603 aaKnown RBP11.49□□□□□ -0.57
DDX49-201ENST00000247003 TRAV21A0A0B4J279 112 aa11.49□□□□□ -0.57
DDX49-201ENST00000247003 OR4C46A6NHA9 309 aa11.49□□□□□ -0.57
DDX49-201ENST00000247003 CACNG7P62955 275 aa11.49□□□□□ -0.57
DDX49-201ENST00000247003 Q96MF0 132 aa11.49□□□□□ -0.57
DDX49-201ENST00000247003 MAP1LC3AQ9H492 121 aa11.49□□□□□ -0.57
DDX49-201ENST00000247003 BAHCC1Q9P281 2608 aa11.48□□□□□ -0.57
DDX49-201ENST00000247003 EREGO14944 169 aa11.48□□□□□ -0.57
DDX49-201ENST00000247003 C11orf21Q9P2W6 132 aa11.48□□□□□ -0.57
DDX49-201ENST00000247003 HSBP1L1C9JCN9 74 aa11.47□□□□□ -0.57
DDX49-201ENST00000247003 J3KRW8 73 aa11.47□□□□□ -0.57
DDX49-201ENST00000247003 ELANEP08246 267 aa11.47□□□□□ -0.57
DDX49-201ENST00000247003 SPANXN1Q5VSR9 72 aa11.47□□□□□ -0.57
DDX49-201ENST00000247003 ZNF575Q86XF7 245 aa11.47□□□□□ -0.57
DDX49-201ENST00000247003 OR8A1Q8NGG7 326 aa11.47□□□□□ -0.57
DDX49-201ENST00000247003 SNHG12Q9BXW3 62 aa11.47□□□□□ -0.57
DDX49-201ENST00000247003 MSRB1Q9NZV6 116 aa11.47□□□□□ -0.57
DDX49-201ENST00000247003 HELZ2Q9BYK8 2649 aaKnown RBP11.47□□□□□ -0.57
DDX49-201ENST00000247003 USP9YO00507 2555 aaPredicted RBP11.47□□□□□ -0.57
DDX49-201ENST00000247003 TRBV7-9A0A0J9YWB2 115 aa11.46□□□□□ -0.57
DDX49-201ENST00000247003 HOXA3O43365 443 aaPredicted RBP11.46□□□□□ -0.57
DDX49-201ENST00000247003 TCF21O43680 179 aa11.46□□□□□ -0.57
DDX49-201ENST00000247003 NCR2O95944 276 aa11.46□□□□□ -0.57
DDX49-201ENST00000247003 RPLP1P05386 114 aaKnown RBP11.46□□□□□ -0.57
DDX49-201ENST00000247003 IGLC3P0DOY3 106 aa11.46□□□□□ -0.57
DDX49-201ENST00000247003 LINC00173Q6ZV60 143 aa11.46□□□□□ -0.57
DDX49-201ENST00000247003 H0Y8G0 127 aa11.46□□□□□ -0.58
DDX49-201ENST00000247003 SMKR1H3BMG3 65 aa11.46□□□□□ -0.58
DDX49-201ENST00000247003 NPYP01303 97 aa11.46□□□□□ -0.58
DDX49-201ENST00000247003 HNRNPA3P51991 378 aaKnown RBP11.46□□□□□ -0.58
DDX49-201ENST00000247003 PRSS57Q6UWY2 283 aa11.46□□□□□ -0.58
DDX49-201ENST00000247003 Q6ZN92 141 aa11.46□□□□□ -0.58
DDX49-201ENST00000247003 RNF185Q96GF1 192 aa11.46□□□□□ -0.58
DDX49-201ENST00000247003 CR1P17927 2039 aa11.45□□□□□ -0.58
DDX49-201ENST00000247003 A0A1B0GV90 55 aa11.45□□□□□ -0.58
DDX49-201ENST00000247003 SNAI2O43623 268 aa11.45□□□□□ -0.58
DDX49-201ENST00000247003 HBDP02042 147 aa11.45□□□□□ -0.58
DDX49-201ENST00000247003 LGALS1P09382 135 aaKnown RBP11.45□□□□□ -0.58
DDX49-201ENST00000247003 S100A4P26447 101 aaKnown RBP11.45□□□□□ -0.58
DDX49-201ENST00000247003 PRR9Q5T870 116 aa11.45□□□□□ -0.58
DDX49-201ENST00000247003 ZFAND2AQ8N6M9 145 aa11.45□□□□□ -0.58
DDX49-201ENST00000247003 PSMG3-AS1Q96PY0 264 aa11.45□□□□□ -0.58
DDX49-201ENST00000247003 ZNF702PQ9H963 129 aa11.45□□□□□ -0.58
DDX49-201ENST00000247003 H3BVH4 76 aa11.44□□□□□ -0.58
DDX49-201ENST00000247003 C10orf99Q6UWK7 81 aa11.44□□□□□ -0.58
DDX49-201ENST00000247003 SPATA12Q7Z6I5 190 aa11.44□□□□□ -0.58
DDX49-201ENST00000247003 TEX29Q8N6K0 151 aa11.44□□□□□ -0.58
DDX49-201ENST00000247003 ZNF747Q9BV97 191 aa11.44□□□□□ -0.58
DDX49-201ENST00000247003 CELSR1Q9NYQ6 3014 aa11.44□□□□□ -0.58
DDX49-201ENST00000247003 DOPEY2Q9Y3R5 2298 aa11.44□□□□□ -0.58
DDX49-201ENST00000247003 SRD5A1P18405 259 aa11.44□□□□□ -0.58
DDX49-201ENST00000247003 ASIPP42127 132 aa11.44□□□□□ -0.58
DDX49-201ENST00000247003 MAJINQ3KP22 176 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms