RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 DEFB1P60022 68 aa14.03□□□□□ -0.16
TNFSF9-201ENST00000245817 KRTAP24-1Q3LI83 254 aa14.03□□□□□ -0.16
TNFSF9-201ENST00000245817 NEU1Q99519 415 aa14.03□□□□□ -0.16
TNFSF9-201ENST00000245817 SPAG8Q99932 426 aaPredicted RBP14.03□□□□□ -0.16
TNFSF9-201ENST00000245817 FAM231BA6NCW3 169 aa14.02□□□□□ -0.16
TNFSF9-201ENST00000245817 HIGD1CA8MV81 97 aa14.02□□□□□ -0.16
TNFSF9-201ENST00000245817 TRBV7-9A0A0J9YWB2 115 aa14.01□□□□□ -0.17
TNFSF9-201ENST00000245817 SPINK4O60575 86 aa14.01□□□□□ -0.17
TNFSF9-201ENST00000245817 ZNF80P51504 273 aaPredicted RBP14.01□□□□□ -0.17
TNFSF9-201ENST00000245817 DUSP14O95147 198 aaKnown RBP14.01□□□□□ -0.17
TNFSF9-201ENST00000245817 ORM1P02763 201 aa14.01□□□□□ -0.17
TNFSF9-201ENST00000245817 TRGC2P03986 189 aa14.01□□□□□ -0.17
TNFSF9-201ENST00000245817 CD33P20138 364 aa14.01□□□□□ -0.17
TNFSF9-201ENST00000245817 RPS20P60866 119 aaKnown RBP14.01□□□□□ -0.17
TNFSF9-201ENST00000245817 NUP35Q8NFH5 326 aa14.01□□□□□ -0.17
TNFSF9-201ENST00000245817 A0A0J9YX75 114 aa14□□□□□ -0.17
TNFSF9-201ENST00000245817 GPX1P07203 203 aa14□□□□□ -0.17
TNFSF9-201ENST00000245817 COX19Q49B96 90 aa14□□□□□ -0.17
TNFSF9-201ENST00000245817 FOXI2Q6ZQN5 318 aa14□□□□□ -0.17
TNFSF9-201ENST00000245817 ZFP82Q8N141 532 aa14□□□□□ -0.17
TNFSF9-201ENST00000245817 J3KRW8 73 aa13.99□□□□□ -0.17
TNFSF9-201ENST00000245817 DEFB131AP59861 70 aa13.99□□□□□ -0.17
TNFSF9-201ENST00000245817 MRPL54Q6P161 138 aaKnown RBP13.99□□□□□ -0.17
TNFSF9-201ENST00000245817 SAV1Q9H4B6 383 aaPredicted RBP13.99□□□□□ -0.17
TNFSF9-201ENST00000245817 TRAPPC1Q9Y5R8 145 aa13.99□□□□□ -0.17
TNFSF9-201ENST00000245817 TMSB15BA0A087X1C1 80 aa13.98□□□□□ -0.17
TNFSF9-201ENST00000245817 GZMBP10144 247 aa13.98□□□□□ -0.17
TNFSF9-201ENST00000245817 Q6AWC8 147 aa13.98□□□□□ -0.17
TNFSF9-201ENST00000245817 PGLYRP4Q96LB8 373 aa13.98□□□□□ -0.17
TNFSF9-201ENST00000245817 FBN1P35555 2871 aaKnown RBP13.98□□□□□ -0.17
TNFSF9-201ENST00000245817 LEPP41159 167 aa13.98□□□□□ -0.17
TNFSF9-201ENST00000245817 GDF5OSQ5U4N7 250 aa13.98□□□□□ -0.17
TNFSF9-201ENST00000245817 WDR73Q6P4I2 378 aa13.98□□□□□ -0.17
TNFSF9-201ENST00000245817 GTSF1Q8WW33 167 aa13.98□□□□□ -0.17
TNFSF9-201ENST00000245817 FRZBQ92765 325 aa13.98□□□□□ -0.17
TNFSF9-201ENST00000245817 BORCS7Q96B45 105 aa13.98□□□□□ -0.17
TNFSF9-201ENST00000245817 CITED1Q99966 193 aa13.98□□□□□ -0.17
TNFSF9-201ENST00000245817 TRAV21A0A0B4J279 112 aa13.97□□□□□ -0.17
TNFSF9-201ENST00000245817 CRISP2P16562 243 aa13.97□□□□□ -0.17
TNFSF9-201ENST00000245817 RAB4BP61018 213 aa13.97□□□□□ -0.17
TNFSF9-201ENST00000245817 RASL11AQ6T310 242 aa13.97□□□□□ -0.17
TNFSF9-201ENST00000245817 ATP5L2Q7Z4Y8 100 aa13.97□□□□□ -0.17
TNFSF9-201ENST00000245817 ZFAND2AQ8N6M9 145 aa13.97□□□□□ -0.17
TNFSF9-201ENST00000245817 OR2K2Q8NGT1 345 aa13.97□□□□□ -0.17
TNFSF9-201ENST00000245817 FAM19A4Q96LR4 140 aa13.97□□□□□ -0.17
TNFSF9-201ENST00000245817 TSPOP30536 169 aa13.96□□□□□ -0.17
TNFSF9-201ENST00000245817 RNASE4P34096 147 aaKnown RBP13.96□□□□□ -0.17
TNFSF9-201ENST00000245817 FOXA3P55318 350 aaPredicted RBP13.96□□□□□ -0.17
TNFSF9-201ENST00000245817 LINC01559Q495D7 138 aa13.96□□□□□ -0.17
TNFSF9-201ENST00000245817 ODF3Q96PU9 254 aa13.96□□□□□ -0.17
TNFSF9-201ENST00000245817 TPPP3Q9BW30 176 aa13.96□□□□□ -0.17
TNFSF9-201ENST00000245817 IGKV3-20P01619 116 aa13.95□□□□□ -0.18
TNFSF9-201ENST00000245817 S100A6P06703 90 aa13.95□□□□□ -0.18
TNFSF9-201ENST00000245817 FABP9Q0Z7S8 132 aa13.95□□□□□ -0.18
TNFSF9-201ENST00000245817 LINC00482Q8N8I6 264 aa13.95□□□□□ -0.18
TNFSF9-201ENST00000245817 GNB1LQ9BYB4 327 aa13.95□□□□□ -0.18
TNFSF9-201ENST00000245817 COL6A5A8TX70 2615 aa13.95□□□□□ -0.18
TNFSF9-201ENST00000245817 SNURFLB1AK76 121 aa13.95□□□□□ -0.18
TNFSF9-201ENST00000245817 MT-ND6P03923 174 aa13.95□□□□□ -0.18
TNFSF9-201ENST00000245817 CMC4P56277 68 aaPredicted RBP13.95□□□□□ -0.18
TNFSF9-201ENST00000245817 ACTL10Q5JWF8 245 aa13.95□□□□□ -0.18
TNFSF9-201ENST00000245817 MAP6D1Q9H9H5 199 aa13.95□□□□□ -0.18
TNFSF9-201ENST00000245817 ZNF256Q9Y2P7 627 aaPredicted RBP13.95□□□□□ -0.18
TNFSF9-201ENST00000245817 IGLV1-51P01701 117 aa13.94□□□□□ -0.18
TNFSF9-201ENST00000245817 KNCNA6PVL3 124 aa13.93□□□□□ -0.18
TNFSF9-201ENST00000245817 HBBP68871 147 aa13.93□□□□□ -0.18
TNFSF9-201ENST00000245817 PRR9Q5T870 116 aa13.93□□□□□ -0.18
TNFSF9-201ENST00000245817 A0A1B0GUT8 65 aa13.92□□□□□ -0.18
TNFSF9-201ENST00000245817 HLA-DQA1P01909 254 aa13.92□□□□□ -0.18
TNFSF9-201ENST00000245817 HLA-DRB4P13762 266 aa13.92□□□□□ -0.18
TNFSF9-201ENST00000245817 CAMPP49913 170 aa13.92□□□□□ -0.18
TNFSF9-201ENST00000245817 RIGQ13278 110 aa13.92□□□□□ -0.18
TNFSF9-201ENST00000245817 APRG1Q8IVJ8 170 aa13.92□□□□□ -0.18
TNFSF9-201ENST00000245817 FER1L6-AS1Q8NA97 138 aa13.92□□□□□ -0.18
TNFSF9-201ENST00000245817 MRPL18Q9H0U6 180 aaKnown RBP13.92□□□□□ -0.18
TNFSF9-201ENST00000245817 NAGKQ9UJ70 344 aa13.92□□□□□ -0.18
TNFSF9-201ENST00000245817 HLA-DRB4X5D2U9 266 aa13.92□□□□□ -0.18
TNFSF9-201ENST00000245817 KLLNB2CW77 178 aa13.91□□□□□ -0.18
TNFSF9-201ENST00000245817 OR11H12B2RN74 326 aa13.91□□□□□ -0.18
TNFSF9-201ENST00000245817 TRGC1P0CF51 173 aa13.91□□□□□ -0.18
TNFSF9-201ENST00000245817 CDKN1BP46527 198 aa13.91□□□□□ -0.18
TNFSF9-201ENST00000245817 IGKV3D-20A0A0C4DH25 116 aa13.91□□□□□ -0.18
TNFSF9-201ENST00000245817 GRIFINA4D1Z8 144 aa13.91□□□□□ -0.18
TNFSF9-201ENST00000245817 S100A8P05109 93 aa13.91□□□□□ -0.18
TNFSF9-201ENST00000245817 FRMD6-AS1P0C7T7 363 aa13.91□□□□□ -0.18
TNFSF9-201ENST00000245817 LYZL1Q6UWQ5 148 aa13.91□□□□□ -0.18
TNFSF9-201ENST00000245817 TMEM136Q6ZRR5 245 aa13.91□□□□□ -0.18
TNFSF9-201ENST00000245817 A0A1B0GW15 77 aa13.9□□□□□ -0.18
TNFSF9-201ENST00000245817 C7orf71A4D174 169 aa13.9□□□□□ -0.18
TNFSF9-201ENST00000245817 H3BMM0 161 aa13.9□□□□□ -0.18
TNFSF9-201ENST00000245817 INSL3P51460 131 aa13.9□□□□□ -0.18
TNFSF9-201ENST00000245817 C12orf54Q6X4T0 127 aa13.9□□□□□ -0.18
TNFSF9-201ENST00000245817 C11orf21Q9P2W6 132 aa13.9□□□□□ -0.18
TNFSF9-201ENST00000245817 WNK1Q9H4A3 2382 aa13.9□□□□□ -0.18
TNFSF9-201ENST00000245817 F2Z2F3 143 aa13.89□□□□□ -0.19
TNFSF9-201ENST00000245817 HIST1H2BKO60814 126 aa13.89□□□□□ -0.19
TNFSF9-201ENST00000245817 HIST1H2BJP06899 126 aa13.89□□□□□ -0.19
TNFSF9-201ENST00000245817 HIST1H2BOP23527 126 aa13.89□□□□□ -0.19
TNFSF9-201ENST00000245817 HIST1H2BBP33778 126 aa13.89□□□□□ -0.19
TNFSF9-201ENST00000245817 HIST1H2BDP58876 126 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms