RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 SUMO1P63165 101 aaKnown RBP11.48□□□□□ -0.57
CLPP-201ENST00000245816 CCL20P78556 96 aa11.48□□□□□ -0.57
CLPP-201ENST00000245816 CST9LP1Q5W188 147 aa11.48□□□□□ -0.57
CLPP-201ENST00000245816 RXFP4Q8TDU9 374 aa11.48□□□□□ -0.57
CLPP-201ENST00000245816 NIPSNAP3BQ9BS92 247 aa11.48□□□□□ -0.57
CLPP-201ENST00000245816 GNG13Q9P2W3 67 aa11.48□□□□□ -0.57
CLPP-201ENST00000245816 YTHDF2Q9Y5A9 579 aaKnown RBP11.48□□□□□ -0.57
CLPP-201ENST00000245816 A0A1W2PRE2 83 aa11.47□□□□□ -0.57
CLPP-201ENST00000245816 LYRM9A8MSI8 78 aa11.47□□□□□ -0.57
CLPP-201ENST00000245816 PAGE4O60829 102 aa11.47□□□□□ -0.57
CLPP-201ENST00000245816 FAM222AQ5U5X8 452 aa11.47□□□□□ -0.57
CLPP-201ENST00000245816 C16orf74Q96GX8 76 aa11.47□□□□□ -0.57
CLPP-201ENST00000245816 FAM210BQ96KR6 192 aa11.47□□□□□ -0.57
CLPP-201ENST00000245816 AGPAT4-IT1Q9H0P7 198 aa11.47□□□□□ -0.57
CLPP-201ENST00000245816 RPH3ALQ9UNE2 315 aa11.47□□□□□ -0.57
CLPP-201ENST00000245816 DEFB131BA0A096LNP1 70 aa11.46□□□□□ -0.57
CLPP-201ENST00000245816 ZNF705GA8MUZ8 300 aaPredicted RBP11.46□□□□□ -0.57
CLPP-201ENST00000245816 KLLNB2CW77 178 aa11.46□□□□□ -0.57
CLPP-201ENST00000245816 EMP1P54849 157 aa11.46□□□□□ -0.57
CLPP-201ENST00000245816 TMEM78Q5T7P6 136 aa11.46□□□□□ -0.57
CLPP-201ENST00000245816 GFI1BQ5VTD9 330 aa11.46□□□□□ -0.57
CLPP-201ENST00000245816 PYGO2Q9BRQ0 406 aa11.46□□□□□ -0.57
CLPP-201ENST00000245816 LINC00467Q9BRT7 94 aa11.46□□□□□ -0.57
CLPP-201ENST00000245816 NKX6-2Q9C056 277 aaPredicted RBP11.46□□□□□ -0.57
CLPP-201ENST00000245816 PCLOQ9Y6V0 5065 aa11.45□□□□□ -0.58
CLPP-201ENST00000245816 FAM74A7A6NL05 159 aa11.45□□□□□ -0.58
CLPP-201ENST00000245816 IFNA1P01562 189 aa11.45□□□□□ -0.58
CLPP-201ENST00000245816 RAB14P61106 215 aa11.45□□□□□ -0.58
CLPP-201ENST00000245816 TMEM263Q8WUH6 116 aaKnown RBP11.45□□□□□ -0.58
CLPP-201ENST00000245816 PCNPQ8WW12 178 aaKnown RBP11.45□□□□□ -0.58
CLPP-201ENST00000245816 ZNF492Q9P255 531 aa11.45□□□□□ -0.58
CLPP-201ENST00000245816 LENEPQ9Y5L5 61 aa11.45□□□□□ -0.58
CLPP-201ENST00000245816 C7orf71A4D174 169 aa11.44□□□□□ -0.58
CLPP-201ENST00000245816 GGTLC3B5MD39 225 aa11.44□□□□□ -0.58
CLPP-201ENST00000245816 ERCC8Q13216 396 aa11.44□□□□□ -0.58
CLPP-201ENST00000245816 CCDC28AQ8IWP9 274 aa11.44□□□□□ -0.58
CLPP-201ENST00000245816 C5orf17Q8NAS9 161 aa11.44□□□□□ -0.58
CLPP-201ENST00000245816 RNASE8Q8TDE3 154 aaKnown RBP11.44□□□□□ -0.58
CLPP-201ENST00000245816 MANBALQ9NQG1 85 aa11.44□□□□□ -0.58
CLPP-201ENST00000245816 TIMM8BQ9Y5J9 83 aaPredicted RBP11.44□□□□□ -0.58
CLPP-201ENST00000245816 IGKV2-40A0A087WW87 121 aaPredicted RBP11.43□□□□□ -0.58
CLPP-201ENST00000245816 PLAC8L1A1L4L8 177 aa11.43□□□□□ -0.58
CLPP-201ENST00000245816 DIRC3C9JPN6 131 aa11.43□□□□□ -0.58
CLPP-201ENST00000245816 ZNF324O75467 553 aaPredicted RBP11.43□□□□□ -0.58
CLPP-201ENST00000245816 IGKV2D-40P01614 121 aaPredicted RBP11.43□□□□□ -0.58
CLPP-201ENST00000245816 AZU1P20160 251 aa11.43□□□□□ -0.58
CLPP-201ENST00000245816 ZNF138P52744 262 aa11.43□□□□□ -0.58
CLPP-201ENST00000245816 GNG5P63218 68 aa11.43□□□□□ -0.58
CLPP-201ENST00000245816 IFITM2Q01629 132 aa11.43□□□□□ -0.58
CLPP-201ENST00000245816 GOLT1AQ6ZVE7 132 aa11.43□□□□□ -0.58
CLPP-201ENST00000245816 VGLL1Q99990 258 aa11.43□□□□□ -0.58
CLPP-201ENST00000245816 EPDR1Q9UM22 224 aa11.43□□□□□ -0.58
CLPP-201ENST00000245816 ARL2-SNX15V9GYD0 113 aa11.43□□□□□ -0.58
CLPP-201ENST00000245816 A0A1B0GVY2 172 aa11.42□□□□□ -0.58
CLPP-201ENST00000245816 SERTM2A0A1B0GWG4 89 aa11.42□□□□□ -0.58
CLPP-201ENST00000245816 F6UZH7 168 aa11.42□□□□□ -0.58
CLPP-201ENST00000245816 GPX1P07203 203 aa11.42□□□□□ -0.58
CLPP-201ENST00000245816 ATP5G3P48201 142 aa11.42□□□□□ -0.58
CLPP-201ENST00000245816 DAD1P61803 113 aa11.42□□□□□ -0.58
CLPP-201ENST00000245816 KIR3DS1Q14943 382 aa11.42□□□□□ -0.58
CLPP-201ENST00000245816 LYPD6BQ8NI32 183 aa11.42□□□□□ -0.58
CLPP-201ENST00000245816 RYR1P21817 5038 aa11.42□□□□□ -0.58
CLPP-201ENST00000245816 TRAV12-3A0A0B4J271 114 aa11.41□□□□□ -0.58
CLPP-201ENST00000245816 K7EQM0 130 aa11.41□□□□□ -0.58
CLPP-201ENST00000245816 ZFAND2AQ8N6M9 145 aa11.41□□□□□ -0.58
CLPP-201ENST00000245816 RTL8CO15255 209 aa11.4□□□□□ -0.58
CLPP-201ENST00000245816 TCRAP04437 139 aa11.4□□□□□ -0.58
CLPP-201ENST00000245816 HTN1P15515 57 aa11.4□□□□□ -0.58
CLPP-201ENST00000245816 TAGLN2P37802 199 aaKnown RBP11.4□□□□□ -0.58
CLPP-201ENST00000245816 ANXA2RQ3ZCQ2 193 aa11.4□□□□□ -0.58
CLPP-201ENST00000245816 ATG101Q9BSB4 218 aa11.4□□□□□ -0.58
CLPP-201ENST00000245816 NDUFAF3Q9BU61 184 aa11.4□□□□□ -0.58
CLPP-201ENST00000245816 VAX2Q9UIW0 290 aa11.4□□□□□ -0.58
CLPP-201ENST00000245816 RBFOX3A6NFN3 312 aa11.39□□□□□ -0.59
CLPP-201ENST00000245816 CBY3A6NI87 242 aa11.39□□□□□ -0.59
CLPP-201ENST00000245816 PEX7O00628 323 aa11.39□□□□□ -0.59
CLPP-201ENST00000245816 BCL2P10415 239 aa11.39□□□□□ -0.59
CLPP-201ENST00000245816 DAZ2Q13117 558 aaKnown RBP11.39□□□□□ -0.59
CLPP-201ENST00000245816 CYB561D1Q8N8Q1 229 aa11.39□□□□□ -0.59
CLPP-201ENST00000245816 HIST1H2BAQ96A08 127 aa11.39□□□□□ -0.59
CLPP-201ENST00000245816 TCEAL7Q9BRU2 100 aa11.39□□□□□ -0.59
CLPP-201ENST00000245816 FBLL1A6NHQ2 334 aaKnown RBP11.38□□□□□ -0.59
CLPP-201ENST00000245816 J3KRW8 73 aa11.38□□□□□ -0.59
CLPP-201ENST00000245816 RNASE4P34096 147 aaKnown RBP11.38□□□□□ -0.59
CLPP-201ENST00000245816 EIF4E3Q8N5X7 224 aaKnown RBP11.38□□□□□ -0.59
CLPP-201ENST00000245816 LINC00612Q8N6U2 182 aa11.38□□□□□ -0.59
CLPP-201ENST00000245816 POM121L12Q8N7R1 296 aa11.38□□□□□ -0.59
CLPP-201ENST00000245816 SGK494Q96LW2 274 aa11.38□□□□□ -0.59
CLPP-201ENST00000245816 TXNDC17Q9BRA2 123 aa11.38□□□□□ -0.59
CLPP-201ENST00000245816 EIF5A2Q9GZV4 153 aaKnown RBP11.38□□□□□ -0.59
CLPP-201ENST00000245816 SNURFLB1AK76 121 aa11.37□□□□□ -0.59
CLPP-201ENST00000245816 M0R2N4 97 aa11.37□□□□□ -0.59
CLPP-201ENST00000245816 MEF2BQ02080 365 aaPredicted RBP11.37□□□□□ -0.59
CLPP-201ENST00000245816 BTN1A1Q13410 526 aa11.37□□□□□ -0.59
CLPP-201ENST00000245816 IBA57Q5T440 356 aaKnown RBP11.37□□□□□ -0.59
CLPP-201ENST00000245816 Q6AWC8 147 aa11.37□□□□□ -0.59
CLPP-201ENST00000245816 LINC00479Q96M42 142 aa11.37□□□□□ -0.59
CLPP-201ENST00000245816 NOP10Q9NPE3 64 aaKnown RBP11.37□□□□□ -0.59
CLPP-201ENST00000245816 NACAE9PAV3 2078 aa11.37□□□□□ -0.59
CLPP-201ENST00000245816 ABCA13Q86UQ4 5058 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms