RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 TRGV3P03979 118 aa16.81■□□□□ 0.28
RNF39-201ENST00000244360 LINC00527Q9UJ94 153 aa16.81■□□□□ 0.28
RNF39-201ENST00000244360 IGHG2P01859 326 aa16.81■□□□□ 0.28
RNF39-201ENST00000244360 LOXL1Q08397 574 aaPredicted RBP16.81■□□□□ 0.28
RNF39-201ENST00000244360 ERCC8Q13216 396 aa16.81■□□□□ 0.28
RNF39-201ENST00000244360 COL12A1Q99715 3063 aa16.8■□□□□ 0.28
RNF39-201ENST00000244360 FABP5P3A8MUU1 101 aa16.8■□□□□ 0.28
RNF39-201ENST00000244360 H3BUA1 57 aa16.8■□□□□ 0.28
RNF39-201ENST00000244360 C2orf91Q6ZV80 131 aa16.8■□□□□ 0.28
RNF39-201ENST00000244360 PPIFP30405 207 aaKnown RBP16.8■□□□□ 0.28
RNF39-201ENST00000244360 IGHV3OR16-13A0A075B7E8 117 aa16.79■□□□□ 0.28
RNF39-201ENST00000244360 IGHV3-74A0A0B4J1X5 117 aa16.79■□□□□ 0.28
RNF39-201ENST00000244360 SEC11AP67812 179 aa16.79■□□□□ 0.28
RNF39-201ENST00000244360 C8orf86Q6ZUL3 223 aa16.79■□□□□ 0.28
RNF39-201ENST00000244360 USP9XQ93008 2570 aaPredicted RBP16.79■□□□□ 0.28
RNF39-201ENST00000244360 H3BUX3 64 aa16.78■□□□□ 0.28
RNF39-201ENST00000244360 ZNF207O43670 478 aaKnown RBP16.78■□□□□ 0.28
RNF39-201ENST00000244360 NPYP01303 97 aa16.78■□□□□ 0.28
RNF39-201ENST00000244360 ARL3P36405 182 aa16.78■□□□□ 0.28
RNF39-201ENST00000244360 LINC01559Q495D7 138 aa16.78■□□□□ 0.28
RNF39-201ENST00000244360 IFI27L1Q96BM0 104 aa16.78■□□□□ 0.28
RNF39-201ENST00000244360 MAP1LC3AQ9H492 121 aa16.78■□□□□ 0.28
RNF39-201ENST00000244360 HIF1ANQ9NWT6 349 aa16.78■□□□□ 0.28
RNF39-201ENST00000244360 LINC01546A6NGU7 62 aa16.77■□□□□ 0.28
RNF39-201ENST00000244360 LY6EQ16553 131 aa16.77■□□□□ 0.28
RNF39-201ENST00000244360 GLMPQ8WWB7 406 aa16.77■□□□□ 0.28
RNF39-201ENST00000244360 FLNCQ14315 2725 aa16.77■□□□□ 0.28
RNF39-201ENST00000244360 IGHV3-49A0A0A0MS15 119 aa16.77■□□□□ 0.27
RNF39-201ENST00000244360 ORM1P02763 201 aa16.77■□□□□ 0.27
RNF39-201ENST00000244360 FGF6P10767 208 aa16.77■□□□□ 0.27
RNF39-201ENST00000244360 DSCR9P59020 149 aa16.77■□□□□ 0.27
RNF39-201ENST00000244360 CACNG7P62955 275 aa16.77■□□□□ 0.27
RNF39-201ENST00000244360 PSMG4Q5JS54 123 aa16.77■□□□□ 0.27
RNF39-201ENST00000244360 B4DSR2 109 aa16.76■□□□□ 0.27
RNF39-201ENST00000244360 IL17RELQ6ZVW7 336 aa16.76■□□□□ 0.27
RNF39-201ENST00000244360 USMG5Q96IX5 58 aa16.76■□□□□ 0.27
RNF39-201ENST00000244360 AGPAT4-IT1Q9H0P7 198 aa16.76■□□□□ 0.27
RNF39-201ENST00000244360 TMEM97Q5BJF2 176 aa16.76■□□□□ 0.27
RNF39-201ENST00000244360 OR9G4Q8NGQ1 327 aa16.76■□□□□ 0.27
RNF39-201ENST00000244360 PEF1Q9UBV8 284 aaKnown RBP16.76■□□□□ 0.27
RNF39-201ENST00000244360 NDUFA4O00483 81 aa16.75■□□□□ 0.27
RNF39-201ENST00000244360 SIVA1O15304 175 aa16.75■□□□□ 0.27
RNF39-201ENST00000244360 ANKRD39Q53RE8 183 aa16.75■□□□□ 0.27
RNF39-201ENST00000244360 BOD1L2Q8IYS8 172 aa16.75■□□□□ 0.27
RNF39-201ENST00000244360 C9orf47Q6ZRZ4 202 aa16.74■□□□□ 0.27
RNF39-201ENST00000244360 RNF185Q96GF1 192 aa16.74■□□□□ 0.27
RNF39-201ENST00000244360 TRBV12-3P01733 135 aa16.74■□□□□ 0.27
RNF39-201ENST00000244360 GATA3P23771 443 aa16.74■□□□□ 0.27
RNF39-201ENST00000244360 RNASE8Q8TDE3 154 aaKnown RBP16.74■□□□□ 0.27
RNF39-201ENST00000244360 NXT2Q9NPJ8 142 aaKnown RBP16.74■□□□□ 0.27
RNF39-201ENST00000244360 CBY3A6NI87 242 aa16.73■□□□□ 0.27
RNF39-201ENST00000244360 SMKR1H3BMG3 65 aa16.73■□□□□ 0.27
RNF39-201ENST00000244360 SMAD7O15105 426 aaKnown RBP16.73■□□□□ 0.27
RNF39-201ENST00000244360 AVPP01185 164 aa16.73■□□□□ 0.27
RNF39-201ENST00000244360 UNQ9165/PRO28630Q6UXU0 137 aa16.73■□□□□ 0.27
RNF39-201ENST00000244360 ACACBO00763 2458 aa16.73■□□□□ 0.27
RNF39-201ENST00000244360 TMEM78Q5T7P6 136 aa16.72■□□□□ 0.27
RNF39-201ENST00000244360 C9orf139Q6ZV77 190 aa16.72■□□□□ 0.27
RNF39-201ENST00000244360 SPG11Q96JI7 2443 aa16.72■□□□□ 0.27
RNF39-201ENST00000244360 BLCAPP62952 87 aa16.72■□□□□ 0.27
RNF39-201ENST00000244360 VPS13CQ709C8 3753 aa16.71■□□□□ 0.27
RNF39-201ENST00000244360 A6NDN8 102 aa16.71■□□□□ 0.27
RNF39-201ENST00000244360 IGLV1-40P01703 118 aa16.71■□□□□ 0.27
RNF39-201ENST00000244360 SLC25A16P16260 332 aa16.71■□□□□ 0.27
RNF39-201ENST00000244360 PRSS57Q6UWY2 283 aa16.71■□□□□ 0.27
RNF39-201ENST00000244360 OR4X2Q8NGF9 303 aa16.71■□□□□ 0.27
RNF39-201ENST00000244360 RBX1P62877 108 aa16.7■□□□□ 0.26
RNF39-201ENST00000244360 HSD52Q0P140 79 aa16.7■□□□□ 0.26
RNF39-201ENST00000244360 ZNF580Q9UK33 172 aa16.7■□□□□ 0.26
RNF39-201ENST00000244360 A1L4Q6 167 aa16.7■□□□□ 0.26
RNF39-201ENST00000244360 FCER1GP30273 86 aa16.7■□□□□ 0.26
RNF39-201ENST00000244360 CFHR3Q02985 330 aa16.7■□□□□ 0.26
RNF39-201ENST00000244360 C16orf92Q96LL3 132 aa16.7■□□□□ 0.26
RNF39-201ENST00000244360 KLK15Q9H2R5 256 aa16.7■□□□□ 0.26
RNF39-201ENST00000244360 IGKV3D-20A0A0C4DH25 116 aa16.69■□□□□ 0.26
RNF39-201ENST00000244360 C7orf71A4D174 169 aa16.69■□□□□ 0.26
RNF39-201ENST00000244360 AMMECR1LQ6DCA0 310 aa16.69■□□□□ 0.26
RNF39-201ENST00000244360 Q6ZS46 218 aa16.69■□□□□ 0.26
RNF39-201ENST00000244360 GPHB5Q86YW7 130 aa16.69■□□□□ 0.26
RNF39-201ENST00000244360 NRGNQ92686 78 aa16.69■□□□□ 0.26
RNF39-201ENST00000244360 C11orf21Q9P2W6 132 aa16.69■□□□□ 0.26
RNF39-201ENST00000244360 SNAI2O43623 268 aa16.69■□□□□ 0.26
RNF39-201ENST00000244360 TNFRSF6BO95407 300 aa16.69■□□□□ 0.26
RNF39-201ENST00000244360 CDKN1BP46527 198 aa16.69■□□□□ 0.26
RNF39-201ENST00000244360 MSRB1Q9NZV6 116 aa16.69■□□□□ 0.26
RNF39-201ENST00000244360 SOCS3O14543 225 aa16.68■□□□□ 0.26
RNF39-201ENST00000244360 FXYD7P58549 80 aa16.68■□□□□ 0.26
RNF39-201ENST00000244360 A0A096LNT2 108 aa16.68■□□□□ 0.26
RNF39-201ENST00000244360 PF4V1P10720 104 aa16.68■□□□□ 0.26
RNF39-201ENST00000244360 ERASQ7Z444 233 aa16.68■□□□□ 0.26
RNF39-201ENST00000244360 C20orf173Q96LM9 149 aa16.68■□□□□ 0.26
RNF39-201ENST00000244360 LENEPQ9Y5L5 61 aa16.68■□□□□ 0.26
RNF39-201ENST00000244360 H3BRM9 83 aa16.67■□□□□ 0.26
RNF39-201ENST00000244360 CELSR1Q9NYQ6 3014 aa16.67■□□□□ 0.26
RNF39-201ENST00000244360 SMIM15Q7Z3B0 74 aa16.66■□□□□ 0.26
RNF39-201ENST00000244360 A0A0G2JLM5 398 aa16.66■□□□□ 0.26
RNF39-201ENST00000244360 IGHV3-11P01762 117 aa16.66■□□□□ 0.26
RNF39-201ENST00000244360 LEPP41159 167 aa16.66■□□□□ 0.26
RNF39-201ENST00000244360 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.66■□□□□ 0.26
RNF39-201ENST00000244360 Q8N8P6 123 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms