RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 LGALS9BQ3B8N2 356 aa11.06□□□□□ -0.64
HIF3A-202ENST00000244303 LGALS9CQ6DKI2 356 aa11.06□□□□□ -0.64
HIF3A-202ENST00000244303 C5orf56Q8N8D9 126 aa11.06□□□□□ -0.64
HIF3A-202ENST00000244303 PKD1L2Q7Z442 2459 aa11.06□□□□□ -0.64
HIF3A-202ENST00000244303 TRAV8-2A0A0B4J237 113 aa11.06□□□□□ -0.64
HIF3A-202ENST00000244303 TMEM219Q86XT9 240 aa11.06□□□□□ -0.64
HIF3A-202ENST00000244303 AGPAT4-IT1Q9H0P7 198 aa11.06□□□□□ -0.64
HIF3A-202ENST00000244303 ABCA2Q9BZC7 2435 aa11.06□□□□□ -0.64
HIF3A-202ENST00000244303 TRBV7-1A0A0A6YYK4 115 aa11.05□□□□□ -0.64
HIF3A-202ENST00000244303 TMEM8BA6NDV4 472 aa11.05□□□□□ -0.64
HIF3A-202ENST00000244303 IFI27L1Q96BM0 104 aa11.05□□□□□ -0.64
HIF3A-202ENST00000244303 METTL26Q96S19 204 aa11.05□□□□□ -0.64
HIF3A-202ENST00000244303 IGKV3D-20A0A0C4DH25 116 aa11.05□□□□□ -0.64
HIF3A-202ENST00000244303 A6NDN8 102 aa11.05□□□□□ -0.64
HIF3A-202ENST00000244303 GTF2H5Q6ZYL4 71 aa11.05□□□□□ -0.64
HIF3A-202ENST00000244303 MAP1LC3AQ9H492 121 aa11.05□□□□□ -0.64
HIF3A-202ENST00000244303 C11orf21Q9P2W6 132 aa11.05□□□□□ -0.64
HIF3A-202ENST00000244303 PIEZO1Q92508 2521 aa11.05□□□□□ -0.64
HIF3A-202ENST00000244303 IGHV3OR16-10A0A075B7F0 116 aa11.04□□□□□ -0.64
HIF3A-202ENST00000244303 C8orf86Q6ZUL3 223 aa11.04□□□□□ -0.64
HIF3A-202ENST00000244303 WFDC3Q8IUB2 231 aa11.04□□□□□ -0.64
HIF3A-202ENST00000244303 LINC00527Q9UJ94 153 aa11.04□□□□□ -0.64
HIF3A-202ENST00000244303 FGF6P10767 208 aa11.04□□□□□ -0.64
HIF3A-202ENST00000244303 DPF1Q92782 380 aa11.04□□□□□ -0.64
HIF3A-202ENST00000244303 EVI2AP22794 236 aa11.03□□□□□ -0.64
HIF3A-202ENST00000244303 ATP5G2Q06055 141 aa11.03□□□□□ -0.64
HIF3A-202ENST00000244303 TMEM78Q5T7P6 136 aa11.03□□□□□ -0.64
HIF3A-202ENST00000244303 TNFRSF6BO95407 300 aa11.02□□□□□ -0.64
HIF3A-202ENST00000244303 OR1N2Q8NGR9 330 aa11.02□□□□□ -0.64
HIF3A-202ENST00000244303 SELENOKQ9Y6D0 94 aa11.02□□□□□ -0.64
HIF3A-202ENST00000244303 CACNA1AO00555 2505 aa11.02□□□□□ -0.64
HIF3A-202ENST00000244303 TRAV41A0A0B4J266 112 aa11.02□□□□□ -0.65
HIF3A-202ENST00000244303 GATA1P15976 413 aaPredicted RBP11.02□□□□□ -0.65
HIF3A-202ENST00000244303 C18orf15Q96N68 181 aa11.02□□□□□ -0.65
HIF3A-202ENST00000244303 MEGF9Q9H1U4 602 aa11.02□□□□□ -0.65
HIF3A-202ENST00000244303 U3KQE9 123 aa11.02□□□□□ -0.65
HIF3A-202ENST00000244303 A1L4Q6 167 aa11.01□□□□□ -0.65
HIF3A-202ENST00000244303 C9orf118A6NHY6 69 aa11.01□□□□□ -0.65
HIF3A-202ENST00000244303 H3BRM9 83 aa11.01□□□□□ -0.65
HIF3A-202ENST00000244303 H3BUT2 72 aa11.01□□□□□ -0.65
HIF3A-202ENST00000244303 Q6ZQT7 251 aa11.01□□□□□ -0.65
HIF3A-202ENST00000244303 MRPL53Q96EL3 112 aaKnown RBP11.01□□□□□ -0.65
HIF3A-202ENST00000244303 CCL19Q99731 98 aa11.01□□□□□ -0.65
HIF3A-202ENST00000244303 NAA38Q9BRA0 125 aaKnown RBP11.01□□□□□ -0.65
HIF3A-202ENST00000244303 CSTL1Q9H114 145 aa11.01□□□□□ -0.65
HIF3A-202ENST00000244303 MOB4Q9Y3A3 225 aa11.01□□□□□ -0.65
HIF3A-202ENST00000244303 LINC01546A6NGU7 62 aa11.01□□□□□ -0.65
HIF3A-202ENST00000244303 TRGV3P03979 118 aa11.01□□□□□ -0.65
HIF3A-202ENST00000244303 LEPP41159 167 aa11.01□□□□□ -0.65
HIF3A-202ENST00000244303 RAB37Q96AX2 223 aa11.01□□□□□ -0.65
HIF3A-202ENST00000244303 NPFFR1Q9GZQ6 430 aa11.01□□□□□ -0.65
HIF3A-202ENST00000244303 DKK2Q9UBU2 259 aa11.01□□□□□ -0.65
HIF3A-202ENST00000244303 IGHV7-4-1A0A0J9YVY3 117 aa11□□□□□ -0.65
HIF3A-202ENST00000244303 SMAD7O15105 426 aaKnown RBP11□□□□□ -0.65
HIF3A-202ENST00000244303 NMUP48645 174 aa11□□□□□ -0.65
HIF3A-202ENST00000244303 C19orf54Q5BKX5 351 aa11□□□□□ -0.65
HIF3A-202ENST00000244303 BRD3OSQ6XYD6 125 aa11□□□□□ -0.65
HIF3A-202ENST00000244303 C9orf47Q6ZRZ4 202 aa11□□□□□ -0.65
HIF3A-202ENST00000244303 PIMREGQ9BSJ6 248 aa11□□□□□ -0.65
HIF3A-202ENST00000244303 NXT2Q9NPJ8 142 aaKnown RBP11□□□□□ -0.65
HIF3A-202ENST00000244303 IGHV4-61A0A0C4DH41 118 aa11□□□□□ -0.65
HIF3A-202ENST00000244303 SAP30O75446 220 aa11□□□□□ -0.65
HIF3A-202ENST00000244303 HSD52Q0P140 79 aa11□□□□□ -0.65
HIF3A-202ENST00000244303 KIR3DS1Q14943 382 aa11□□□□□ -0.65
HIF3A-202ENST00000244303 BOD1L2Q8IYS8 172 aa11□□□□□ -0.65
HIF3A-202ENST00000244303 PIFOQ8TCI5 191 aa11□□□□□ -0.65
HIF3A-202ENST00000244303 C16orf92Q96LL3 132 aa11□□□□□ -0.65
HIF3A-202ENST00000244303 A0A0G2JLM5 398 aa10.99□□□□□ -0.65
HIF3A-202ENST00000244303 FCER1GP30273 86 aa10.99□□□□□ -0.65
HIF3A-202ENST00000244303 OR9G4Q8NGQ1 327 aa10.99□□□□□ -0.65
HIF3A-202ENST00000244303 C10orf105Q8TEF2 133 aa10.99□□□□□ -0.65
HIF3A-202ENST00000244303 HIF1ANQ9NWT6 349 aa10.99□□□□□ -0.65
HIF3A-202ENST00000244303 FAM223BA6NKX1 122 aa10.98□□□□□ -0.65
HIF3A-202ENST00000244303 RIPPLY3P57055 190 aa10.98□□□□□ -0.65
HIF3A-202ENST00000244303 FAM223AQ8IWN6 122 aa10.98□□□□□ -0.65
HIF3A-202ENST00000244303 TRAV40A0A0B4J280 105 aa10.98□□□□□ -0.65
HIF3A-202ENST00000244303 IGHV1-69DA0A0B4J2H0 117 aa10.98□□□□□ -0.65
HIF3A-202ENST00000244303 IGHV1-69P01742 117 aa10.98□□□□□ -0.65
HIF3A-202ENST00000244303 ARL3P36405 182 aa10.98□□□□□ -0.65
HIF3A-202ENST00000244303 GLMPQ8WWB7 406 aa10.98□□□□□ -0.65
HIF3A-202ENST00000244303 JMJD8Q96S16 334 aa10.98□□□□□ -0.65
HIF3A-202ENST00000244303 K7EP34 96 aa10.97□□□□□ -0.65
HIF3A-202ENST00000244303 TRBV12-3P01733 135 aa10.97□□□□□ -0.65
HIF3A-202ENST00000244303 PRR9Q5T870 116 aa10.97□□□□□ -0.65
HIF3A-202ENST00000244303 UFSP1Q6NVU6 142 aa10.97□□□□□ -0.65
HIF3A-202ENST00000244303 OR4X2Q8NGF9 303 aa10.97□□□□□ -0.65
HIF3A-202ENST00000244303 OR2K2Q8NGT1 345 aa10.97□□□□□ -0.65
HIF3A-202ENST00000244303 C20orf173Q96LM9 149 aa10.97□□□□□ -0.65
HIF3A-202ENST00000244303 UFC1Q9Y3C8 167 aa10.97□□□□□ -0.65
HIF3A-202ENST00000244303 TRAV26-2A0A0B4J265 109 aa10.97□□□□□ -0.65
HIF3A-202ENST00000244303 CRIP2P52943 208 aaPredicted RBP10.97□□□□□ -0.65
HIF3A-202ENST00000244303 UNQ9165/PRO28630Q6UXU0 137 aa10.97□□□□□ -0.65
HIF3A-202ENST00000244303 PCP2Q8IVA1 136 aa10.97□□□□□ -0.65
HIF3A-202ENST00000244303 TMEM158Q8WZ71 300 aa10.97□□□□□ -0.65
HIF3A-202ENST00000244303 ATP6V0BQ99437 205 aa10.97□□□□□ -0.65
HIF3A-202ENST00000244303 SPTAN1Q13813 2472 aaKnown RBP10.96□□□□□ -0.65
HIF3A-202ENST00000244303 IGLV2-18A0A075B6J9 118 aa10.96□□□□□ -0.65
HIF3A-202ENST00000244303 ATP5J2P56134 94 aa10.96□□□□□ -0.65
HIF3A-202ENST00000244303 C9orf139Q6ZV77 190 aa10.96□□□□□ -0.65
HIF3A-202ENST00000244303 Q8N8P6 123 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms