RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 A8MWP6 167 aa17.12■□□□□ 0.33
CDX1-201ENST00000231656 SOCS3O14543 225 aa17.12■□□□□ 0.33
CDX1-201ENST00000231656 SRIP30626 198 aa17.12■□□□□ 0.33
CDX1-201ENST00000231656 FAM106AQ4KMX7 169 aa17.12■□□□□ 0.33
CDX1-201ENST00000231656 OR10J3Q5JRS4 329 aa17.12■□□□□ 0.33
CDX1-201ENST00000231656 C20orf173Q96LM9 149 aa17.11■□□□□ 0.33
CDX1-201ENST00000231656 SSBP4Q9BWG4 385 aaPredicted RBP17.11■□□□□ 0.33
CDX1-201ENST00000231656 RHPN1-AS1Q9BWJ2 59 aa17.11■□□□□ 0.33
CDX1-201ENST00000231656 AGPAT4-IT1Q9H0P7 198 aa17.11■□□□□ 0.33
CDX1-201ENST00000231656 TSSC4Q9Y5U2 329 aaPredicted RBP17.11■□□□□ 0.33
CDX1-201ENST00000231656 ATRQ13535 2644 aa17.11■□□□□ 0.33
CDX1-201ENST00000231656 TMEM189A5PLL7 270 aa17.1■□□□□ 0.33
CDX1-201ENST00000231656 SERF1AO75920 110 aa17.1■□□□□ 0.33
CDX1-201ENST00000231656 BAGE3Q86Y29 109 aa17.1■□□□□ 0.33
CDX1-201ENST00000231656 SMPXQ9UHP9 88 aa17.1■□□□□ 0.33
CDX1-201ENST00000231656 HOXD3P31249 432 aaPredicted RBP17.1■□□□□ 0.33
CDX1-201ENST00000231656 C9orf47Q6ZRZ4 202 aa17.1■□□□□ 0.33
CDX1-201ENST00000231656 OR11H1Q8NG94 326 aa17.1■□□□□ 0.33
CDX1-201ENST00000231656 A0A1W2PRX2 142 aa17.09■□□□□ 0.33
CDX1-201ENST00000231656 PCP4L1A6NKN8 68 aa17.09■□□□□ 0.33
CDX1-201ENST00000231656 BMI1P35226 326 aa17.09■□□□□ 0.33
CDX1-201ENST00000231656 KRTAP10-3P60369 221 aa17.09■□□□□ 0.33
CDX1-201ENST00000231656 Q6AWC8 147 aa17.09■□□□□ 0.33
CDX1-201ENST00000231656 LINC01619G3V211 115 aa17.08■□□□□ 0.33
CDX1-201ENST00000231656 OR1N2Q8NGR9 330 aa17.08■□□□□ 0.33
CDX1-201ENST00000231656 DUX3Q96PT4 197 aa17.08■□□□□ 0.33
CDX1-201ENST00000231656 A0A1B0GUT8 65 aa17.07■□□□□ 0.32
CDX1-201ENST00000231656 ARMS2P0C7Q2 107 aa17.07■□□□□ 0.32
CDX1-201ENST00000231656 EDN2P20800 178 aa17.07■□□□□ 0.32
CDX1-201ENST00000231656 ZNF138P52744 262 aa17.07■□□□□ 0.32
CDX1-201ENST00000231656 CDPF1Q6NVV7 123 aa17.07■□□□□ 0.32
CDX1-201ENST00000231656 NRN1Q9NPD7 142 aa17.07■□□□□ 0.32
CDX1-201ENST00000231656 SYNJ2BPP57105 145 aa17.07■□□□□ 0.32
CDX1-201ENST00000231656 GATD1Q8NB37 220 aa17.07■□□□□ 0.32
CDX1-201ENST00000231656 DPF1Q92782 380 aa17.07■□□□□ 0.32
CDX1-201ENST00000231656 ALKBH7Q9BT30 221 aaPredicted RBP17.07■□□□□ 0.32
CDX1-201ENST00000231656 PPP1R14DQ9NXH3 145 aa17.07■□□□□ 0.32
CDX1-201ENST00000231656 UFC1Q9Y3C8 167 aa17.07■□□□□ 0.32
CDX1-201ENST00000231656 TENM1Q9UKZ4 2725 aa17.06■□□□□ 0.32
CDX1-201ENST00000231656 TMSB15BA0A087X1C1 80 aa17.06■□□□□ 0.32
CDX1-201ENST00000231656 SLURP1P55000 103 aa17.06■□□□□ 0.32
CDX1-201ENST00000231656 RIGQ13278 110 aa17.06■□□□□ 0.32
CDX1-201ENST00000231656 KLF5Q13887 457 aaPredicted RBP17.06■□□□□ 0.32
CDX1-201ENST00000231656 JOSD1Q15040 202 aaPredicted RBP17.06■□□□□ 0.32
CDX1-201ENST00000231656 DNLZQ5SXM8 178 aa17.06■□□□□ 0.32
CDX1-201ENST00000231656 TMEM78Q5T7P6 136 aa17.06■□□□□ 0.32
CDX1-201ENST00000231656 ZNF575Q86XF7 245 aa17.06■□□□□ 0.32
CDX1-201ENST00000231656 LGALS9O00182 355 aa17.05■□□□□ 0.32
CDX1-201ENST00000231656 RPS20P60866 119 aaKnown RBP17.05■□□□□ 0.32
CDX1-201ENST00000231656 REC114Q7Z4M0 266 aa17.05■□□□□ 0.32
CDX1-201ENST00000231656 ZNF738Q8NE65 137 aa17.05■□□□□ 0.32
CDX1-201ENST00000231656 C18orf32Q8TCD1 76 aa17.05■□□□□ 0.32
CDX1-201ENST00000231656 WNK1Q9H4A3 2382 aa17.05■□□□□ 0.32
CDX1-201ENST00000231656 FABP5P3A8MUU1 101 aa17.05■□□□□ 0.32
CDX1-201ENST00000231656 PRR31Q5SQ13 230 aa17.05■□□□□ 0.32
CDX1-201ENST00000231656 RAX2Q96IS3 184 aa17.05■□□□□ 0.32
CDX1-201ENST00000231656 RCHY1Q96PM5 261 aa17.05■□□□□ 0.32
CDX1-201ENST00000231656 A0A1B0GW15 77 aa17.04■□□□□ 0.32
CDX1-201ENST00000231656 TMEM213A2RRL7 107 aa17.04■□□□□ 0.32
CDX1-201ENST00000231656 ADARB2-AS1A8MUL3 147 aa17.04■□□□□ 0.32
CDX1-201ENST00000231656 PAFAH1B2P68402 229 aa17.04■□□□□ 0.32
CDX1-201ENST00000231656 RPL11P62913 178 aaKnown RBP17.03■□□□□ 0.32
CDX1-201ENST00000231656 OVOL1O14753 267 aa17.02■□□□□ 0.32
CDX1-201ENST00000231656 FHL3Q13643 280 aa17.02■□□□□ 0.32
CDX1-201ENST00000231656 IQCJQ1A5X6 159 aa17.02■□□□□ 0.32
CDX1-201ENST00000231656 LYZL1Q6UWQ5 148 aa17.02■□□□□ 0.32
CDX1-201ENST00000231656 PRIMA1Q86XR5 153 aa17.02■□□□□ 0.32
CDX1-201ENST00000231656 TPPP3Q9BW30 176 aa17.02■□□□□ 0.32
CDX1-201ENST00000231656 CCL24O00175 119 aa17.02■□□□□ 0.31
CDX1-201ENST00000231656 IGLC6P0CF74 106 aa17.02■□□□□ 0.31
CDX1-201ENST00000231656 CTRLP40313 264 aa17.02■□□□□ 0.31
CDX1-201ENST00000231656 LINC01559Q495D7 138 aa17.02■□□□□ 0.31
CDX1-201ENST00000231656 LOC102724200A0A096LPH7 203 aaPredicted RBP17.01■□□□□ 0.31
CDX1-201ENST00000231656 ZNF705DP0CH99 300 aaPredicted RBP17.01■□□□□ 0.31
CDX1-201ENST00000231656 ZNF705BP0CI00 300 aaPredicted RBP17.01■□□□□ 0.31
CDX1-201ENST00000231656 S100A12P80511 92 aa17.01■□□□□ 0.31
CDX1-201ENST00000231656 HIST1H1AQ02539 215 aaPredicted RBP17.01■□□□□ 0.31
CDX1-201ENST00000231656 NSUN5P1Q3KNT7 163 aa17.01■□□□□ 0.31
CDX1-201ENST00000231656 KRTAP24-1Q3LI83 254 aa17.01■□□□□ 0.31
CDX1-201ENST00000231656 BORCS7Q96B45 105 aa17.01■□□□□ 0.31
CDX1-201ENST00000231656 KCNS1Q96KK3 526 aa17.01■□□□□ 0.31
CDX1-201ENST00000231656 GSN-AS1Q9NRJ2 163 aa17.01■□□□□ 0.31
CDX1-201ENST00000231656 LENEPQ9Y5L5 61 aa17.01■□□□□ 0.31
CDX1-201ENST00000231656 NDUFA11Q86Y39 141 aa17■□□□□ 0.31
CDX1-201ENST00000231656 DLX4Q92988 240 aaPredicted RBP17■□□□□ 0.31
CDX1-201ENST00000231656 SELENOKQ9Y6D0 94 aa17■□□□□ 0.31
CDX1-201ENST00000231656 IGKV3-7A0A075B6H7 116 aa17■□□□□ 0.31
CDX1-201ENST00000231656 ORM1P02763 201 aa17■□□□□ 0.31
CDX1-201ENST00000231656 LINC00477Q96M19 166 aa17■□□□□ 0.31
CDX1-201ENST00000231656 FER1L6-AS1Q8NA97 138 aa16.99■□□□□ 0.31
CDX1-201ENST00000231656 FBN1P35555 2871 aaKnown RBP16.98■□□□□ 0.31
CDX1-201ENST00000231656 GPX1P07203 203 aa16.98■□□□□ 0.31
CDX1-201ENST00000231656 ZNF493Q6ZR52 646 aa16.98■□□□□ 0.31
CDX1-201ENST00000231656 OR10J6PQ8NGY7 276 aa16.98■□□□□ 0.31
CDX1-201ENST00000231656 DCANP1Q8TF63 244 aa16.98■□□□□ 0.31
CDX1-201ENST00000231656 C11orf21Q9P2W6 132 aa16.98■□□□□ 0.31
CDX1-201ENST00000231656 C2orf70A6NJV1 201 aa16.97■□□□□ 0.31
CDX1-201ENST00000231656 DEFB1P60022 68 aa16.97■□□□□ 0.31
CDX1-201ENST00000231656 SAMD13Q5VXD3 122 aa16.97■□□□□ 0.31
CDX1-201ENST00000231656 Q6ZWC4 215 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms