RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 ASH1LQ9NR48 2969 aaKnown RBP12.51□□□□□ -0.41
LTBR-201ENST00000228918 C9orf118A6NHY6 69 aa12.51□□□□□ -0.41
LTBR-201ENST00000228918 SMAD7O15105 426 aaKnown RBP12.51□□□□□ -0.41
LTBR-201ENST00000228918 TNFRSF6BO95407 300 aa12.51□□□□□ -0.41
LTBR-201ENST00000228918 PPIFP30405 207 aaKnown RBP12.51□□□□□ -0.41
LTBR-201ENST00000228918 LMO4P61968 165 aa12.51□□□□□ -0.41
LTBR-201ENST00000228918 C11orf21Q9P2W6 132 aa12.51□□□□□ -0.41
LTBR-201ENST00000228918 TRBV7-1A0A0A6YYK4 115 aa12.5□□□□□ -0.41
LTBR-201ENST00000228918 MRPL53Q96EL3 112 aaKnown RBP12.5□□□□□ -0.41
LTBR-201ENST00000228918 METTL26Q96S19 204 aa12.5□□□□□ -0.41
LTBR-201ENST00000228918 HIVEP3Q5T1R4 2406 aa12.5□□□□□ -0.41
LTBR-201ENST00000228918 H3BRM9 83 aa12.5□□□□□ -0.41
LTBR-201ENST00000228918 NPFFO15130 113 aa12.5□□□□□ -0.41
LTBR-201ENST00000228918 C8orf86Q6ZUL3 223 aa12.5□□□□□ -0.41
LTBR-201ENST00000228918 NEGR1Q7Z3B1 354 aa12.5□□□□□ -0.41
LTBR-201ENST00000228918 WFDC3Q8IUB2 231 aa12.5□□□□□ -0.41
LTBR-201ENST00000228918 C5orf56Q8N8D9 126 aa12.5□□□□□ -0.41
LTBR-201ENST00000228918 BPESC1Q9GZL8 116 aa12.5□□□□□ -0.41
LTBR-201ENST00000228918 NXT2Q9NPJ8 142 aaKnown RBP12.5□□□□□ -0.41
LTBR-201ENST00000228918 PIEZO1Q92508 2521 aa12.5□□□□□ -0.41
LTBR-201ENST00000228918 IGHV3-49A0A0A0MS15 119 aa12.49□□□□□ -0.41
LTBR-201ENST00000228918 EVI2AP22794 236 aa12.49□□□□□ -0.41
LTBR-201ENST00000228918 TCTAP57738 103 aa12.49□□□□□ -0.41
LTBR-201ENST00000228918 OR9G4Q8NGQ1 327 aa12.49□□□□□ -0.41
LTBR-201ENST00000228918 JMJD8Q96S16 334 aa12.49□□□□□ -0.41
LTBR-201ENST00000228918 DKK2Q9UBU2 259 aa12.49□□□□□ -0.41
LTBR-201ENST00000228918 U3KQE9 123 aa12.49□□□□□ -0.41
LTBR-201ENST00000228918 K7EP34 96 aa12.49□□□□□ -0.41
LTBR-201ENST00000228918 ZNF207O43670 478 aaKnown RBP12.49□□□□□ -0.41
LTBR-201ENST00000228918 FCER1GP30273 86 aa12.49□□□□□ -0.41
LTBR-201ENST00000228918 LEPP41159 167 aa12.49□□□□□ -0.41
LTBR-201ENST00000228918 TMEM78Q5T7P6 136 aa12.49□□□□□ -0.41
LTBR-201ENST00000228918 C18orf15Q96N68 181 aa12.49□□□□□ -0.41
LTBR-201ENST00000228918 GATA1P15976 413 aaPredicted RBP12.48□□□□□ -0.41
LTBR-201ENST00000228918 SIVA1O15304 175 aa12.48□□□□□ -0.41
LTBR-201ENST00000228918 HIF1ANQ9NWT6 349 aa12.48□□□□□ -0.41
LTBR-201ENST00000228918 IGHV7-4-1A0A0J9YVY3 117 aa12.47□□□□□ -0.41
LTBR-201ENST00000228918 A1L4Q6 167 aa12.47□□□□□ -0.41
LTBR-201ENST00000228918 TRGV3P03979 118 aa12.47□□□□□ -0.41
LTBR-201ENST00000228918 C9orf47Q6ZRZ4 202 aa12.47□□□□□ -0.41
LTBR-201ENST00000228918 A6NDN8 102 aa12.46□□□□□ -0.41
LTBR-201ENST00000228918 HSD52Q0P140 79 aa12.46□□□□□ -0.41
LTBR-201ENST00000228918 AP1S3Q96PC3 154 aa12.46□□□□□ -0.41
LTBR-201ENST00000228918 IGLV2-18A0A075B6J9 118 aa12.46□□□□□ -0.42
LTBR-201ENST00000228918 UQCRFS1P47985 274 aa12.46□□□□□ -0.42
LTBR-201ENST00000228918 ATP5G2Q06055 141 aa12.46□□□□□ -0.42
LTBR-201ENST00000228918 ODF1Q14990 250 aa12.46□□□□□ -0.42
LTBR-201ENST00000228918 ADAMTSL5Q6ZMM2 481 aa12.46□□□□□ -0.42
LTBR-201ENST00000228918 PCP2Q8IVA1 136 aa12.46□□□□□ -0.42
LTBR-201ENST00000228918 Q8N8P6 123 aa12.46□□□□□ -0.42
LTBR-201ENST00000228918 PIFOQ8TCI5 191 aa12.46□□□□□ -0.42
LTBR-201ENST00000228918 ZMAT4Q9H898 229 aa12.46□□□□□ -0.42
LTBR-201ENST00000228918 NMUP48645 174 aa12.45□□□□□ -0.42
LTBR-201ENST00000228918 C19orf54Q5BKX5 351 aa12.45□□□□□ -0.42
LTBR-201ENST00000228918 TMEM219Q86XT9 240 aa12.45□□□□□ -0.42
LTBR-201ENST00000228918 OR4X2Q8NGF9 303 aa12.45□□□□□ -0.42
LTBR-201ENST00000228918 SPTBN4Q9H254 2564 aa12.45□□□□□ -0.42
LTBR-201ENST00000228918 H3BUT2 72 aa12.45□□□□□ -0.42
LTBR-201ENST00000228918 OR2K2Q8NGT1 345 aa12.45□□□□□ -0.42
LTBR-201ENST00000228918 TMEM158Q8WZ71 300 aa12.45□□□□□ -0.42
LTBR-201ENST00000228918 ATP6V0BQ99437 205 aa12.45□□□□□ -0.42
LTBR-201ENST00000228918 MOB4Q9Y3A3 225 aa12.45□□□□□ -0.42
LTBR-201ENST00000228918 TRAV41A0A0B4J266 112 aa12.44□□□□□ -0.42
LTBR-201ENST00000228918 A0A0G2JLM5 398 aa12.44□□□□□ -0.42
LTBR-201ENST00000228918 Q6ZQT7 251 aa12.44□□□□□ -0.42
LTBR-201ENST00000228918 GLMPQ8WWB7 406 aa12.44□□□□□ -0.42
LTBR-201ENST00000228918 FAM223BA6NKX1 122 aa12.43□□□□□ -0.42
LTBR-201ENST00000228918 KIR3DS1Q14943 382 aa12.43□□□□□ -0.42
LTBR-201ENST00000228918 FAM223AQ8IWN6 122 aa12.43□□□□□ -0.42
LTBR-201ENST00000228918 NRACQ8N912 160 aa12.43□□□□□ -0.42
LTBR-201ENST00000228918 ABCA2Q9BZC7 2435 aa12.43□□□□□ -0.42
LTBR-201ENST00000228918 AKAP6Q13023 2319 aa12.43□□□□□ -0.42
LTBR-201ENST00000228918 IGHV4-4A0A075B6R2 117 aa12.42□□□□□ -0.42
LTBR-201ENST00000228918 PRSS47A8MTI9 375 aa12.42□□□□□ -0.42
LTBR-201ENST00000228918 SMIM17P0DL12 118 aa12.42□□□□□ -0.42
LTBR-201ENST00000228918 CRIP2P52943 208 aaPredicted RBP12.42□□□□□ -0.42
LTBR-201ENST00000228918 C9orf139Q6ZV77 190 aa12.42□□□□□ -0.42
LTBR-201ENST00000228918 OR5A1Q8NGJ0 315 aa12.42□□□□□ -0.42
LTBR-201ENST00000228918 C16orf92Q96LL3 132 aa12.42□□□□□ -0.42
LTBR-201ENST00000228918 HHLA3Q9XRX5 114 aa12.42□□□□□ -0.42
LTBR-201ENST00000228918 PSMG4Q5JS54 123 aa12.42□□□□□ -0.42
LTBR-201ENST00000228918 PRR9Q5T870 116 aa12.42□□□□□ -0.42
LTBR-201ENST00000228918 ITLN2Q8WWU7 325 aaPredicted RBP12.42□□□□□ -0.42
LTBR-201ENST00000228918 LINC00527Q9UJ94 153 aa12.42□□□□□ -0.42
LTBR-201ENST00000228918 UFC1Q9Y3C8 167 aa12.42□□□□□ -0.42
LTBR-201ENST00000228918 PRSS1P07477 247 aa12.41□□□□□ -0.42
LTBR-201ENST00000228918 SELENOKQ9Y6D0 94 aa12.41□□□□□ -0.42
LTBR-201ENST00000228918 ZFHX3Q15911 3703 aa12.41□□□□□ -0.42
LTBR-201ENST00000228918 IGHV3OR16-10A0A075B7F0 116 aa12.41□□□□□ -0.42
LTBR-201ENST00000228918 IGKV2D-26A0A0A0MRZ7 120 aa12.41□□□□□ -0.42
LTBR-201ENST00000228918 TRAV26-2A0A0B4J265 109 aa12.41□□□□□ -0.42
LTBR-201ENST00000228918 IGKCP01834 107 aa12.41□□□□□ -0.42
LTBR-201ENST00000228918 C20orf173Q96LM9 149 aa12.41□□□□□ -0.42
LTBR-201ENST00000228918 FOXC2Q99958 501 aa12.41□□□□□ -0.42
LTBR-201ENST00000228918 A0A1W2PPM0 123 aa12.4□□□□□ -0.42
LTBR-201ENST00000228918 NDUFS8O00217 210 aa12.4□□□□□ -0.42
LTBR-201ENST00000228918 ATP5LO75964 103 aa12.4□□□□□ -0.42
LTBR-201ENST00000228918 ARL3P36405 182 aa12.4□□□□□ -0.42
LTBR-201ENST00000228918 SPANXN1Q5VSR9 72 aa12.4□□□□□ -0.42
LTBR-201ENST00000228918 NAA38Q9BRA0 125 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms