RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 CRXO43186 299 aaPredicted RBP14.52□□□□□ -0.08
YBX3-201ENST00000228251 PMCHL1Q16048 86 aa14.52□□□□□ -0.08
YBX3-201ENST00000228251 Q5PR19 223 aa14.52□□□□□ -0.08
YBX3-201ENST00000228251 AMN1Q8IY45 258 aa14.52□□□□□ -0.08
YBX3-201ENST00000228251 PAM16Q9Y3D7 125 aa14.52□□□□□ -0.08
YBX3-201ENST00000228251 BTF3P20290 206 aaKnown RBP14.52□□□□□ -0.09
YBX3-201ENST00000228251 RAB4AP20338 218 aa14.52□□□□□ -0.09
YBX3-201ENST00000228251 MRPL51Q4U2R6 128 aaKnown RBP14.52□□□□□ -0.09
YBX3-201ENST00000228251 TM4SF20Q53R12 229 aa14.52□□□□□ -0.09
YBX3-201ENST00000228251 C10orf99Q6UWK7 81 aa14.52□□□□□ -0.09
YBX3-201ENST00000228251 SPATA12Q7Z6I5 190 aa14.52□□□□□ -0.09
YBX3-201ENST00000228251 MYOZ3Q8TDC0 251 aa14.52□□□□□ -0.09
YBX3-201ENST00000228251 TMEM191AQ9H0A3 160 aa14.52□□□□□ -0.09
YBX3-201ENST00000228251 DAZ1Q9NQZ3 744 aaKnown RBP14.52□□□□□ -0.09
YBX3-201ENST00000228251 SMPXQ9UHP9 88 aa14.52□□□□□ -0.09
YBX3-201ENST00000228251 PRR9Q5T870 116 aa14.51□□□□□ -0.09
YBX3-201ENST00000228251 RHPN1-AS1Q9BWJ2 59 aa14.51□□□□□ -0.09
YBX3-201ENST00000228251 MUC21A0A0G2JKD1 596 aa14.5□□□□□ -0.09
YBX3-201ENST00000228251 MUC21A0A140T8X8 626 aa14.5□□□□□ -0.09
YBX3-201ENST00000228251 OR5AL1P0C617 328 aa14.5□□□□□ -0.09
YBX3-201ENST00000228251 MUC21Q5SSG8 566 aa14.5□□□□□ -0.09
YBX3-201ENST00000228251 LINC00173Q6ZV60 143 aa14.5□□□□□ -0.09
YBX3-201ENST00000228251 FAM19A4Q96LR4 140 aa14.5□□□□□ -0.09
YBX3-201ENST00000228251 D6R8Y8 96 aa14.5□□□□□ -0.09
YBX3-201ENST00000228251 OVOL1O14753 267 aa14.5□□□□□ -0.09
YBX3-201ENST00000228251 ZFAND2AQ8N6M9 145 aa14.5□□□□□ -0.09
YBX3-201ENST00000228251 ZNF738Q8NE65 137 aa14.5□□□□□ -0.09
YBX3-201ENST00000228251 RNF185Q96GF1 192 aa14.5□□□□□ -0.09
YBX3-201ENST00000228251 LINC00477Q96M19 166 aa14.5□□□□□ -0.09
YBX3-201ENST00000228251 MIEN1Q9BRT3 115 aa14.5□□□□□ -0.09
YBX3-201ENST00000228251 ZNF702PQ9H963 129 aa14.5□□□□□ -0.09
YBX3-201ENST00000228251 MSRB1Q9NZV6 116 aa14.5□□□□□ -0.09
YBX3-201ENST00000228251 FOXE3Q13461 319 aa14.49□□□□□ -0.09
YBX3-201ENST00000228251 TEX15Q9BXT5 2789 aa14.49□□□□□ -0.09
YBX3-201ENST00000228251 CREBBPQ92793 2442 aa14.48□□□□□ -0.09
YBX3-201ENST00000228251 EDN2P20800 178 aa14.48□□□□□ -0.09
YBX3-201ENST00000228251 TWIST1Q15672 202 aa14.48□□□□□ -0.09
YBX3-201ENST00000228251 PRSS57Q6UWY2 283 aa14.48□□□□□ -0.09
YBX3-201ENST00000228251 Q6ZQT7 251 aa14.48□□□□□ -0.09
YBX3-201ENST00000228251 LURAP1LQ8IV03 231 aa14.48□□□□□ -0.09
YBX3-201ENST00000228251 APRG1Q8IVJ8 170 aa14.48□□□□□ -0.09
YBX3-201ENST00000228251 ORMDL3Q8N138 153 aa14.48□□□□□ -0.09
YBX3-201ENST00000228251 PRELID3AQ96N28 172 aa14.48□□□□□ -0.09
YBX3-201ENST00000228251 TMEM70Q9BUB7 260 aa14.48□□□□□ -0.09
YBX3-201ENST00000228251 CSN3P07498 182 aa14.47□□□□□ -0.09
YBX3-201ENST00000228251 LBHQ53QV2 105 aaPredicted RBP14.47□□□□□ -0.09
YBX3-201ENST00000228251 C2orf88Q9BSF0 95 aa14.47□□□□□ -0.09
YBX3-201ENST00000228251 LEPROTL1O95214 131 aa14.47□□□□□ -0.09
YBX3-201ENST00000228251 RNF152Q8N8N0 203 aa14.47□□□□□ -0.09
YBX3-201ENST00000228251 AP5S1Q9NUS5 200 aa14.47□□□□□ -0.09
YBX3-201ENST00000228251 SIGLEC8Q9NYZ4 499 aa14.47□□□□□ -0.09
YBX3-201ENST00000228251 TENM4Q6N022 2769 aa14.46□□□□□ -0.09
YBX3-201ENST00000228251 IGHV4-4A0A075B6R2 117 aa14.46□□□□□ -0.09
YBX3-201ENST00000228251 A0A096LNJ9 63 aa14.46□□□□□ -0.09
YBX3-201ENST00000228251 SYS1-DBNDD2H3BUS1 97 aa14.46□□□□□ -0.09
YBX3-201ENST00000228251 SNAI2O43623 268 aa14.46□□□□□ -0.09
YBX3-201ENST00000228251 SSTP61278 116 aa14.46□□□□□ -0.09
YBX3-201ENST00000228251 FAM106AQ4KMX7 169 aa14.46□□□□□ -0.09
YBX3-201ENST00000228251 SPATA45Q537H7 98 aa14.46□□□□□ -0.09
YBX3-201ENST00000228251 Q96MF0 132 aa14.46□□□□□ -0.09
YBX3-201ENST00000228251 TRBV7-9A0A0J9YWB2 115 aa14.45□□□□□ -0.1
YBX3-201ENST00000228251 EREGO14944 169 aa14.45□□□□□ -0.1
YBX3-201ENST00000228251 RPLP1P05386 114 aaKnown RBP14.45□□□□□ -0.1
YBX3-201ENST00000228251 DEFB1P60022 68 aa14.45□□□□□ -0.1
YBX3-201ENST00000228251 DCANP1Q8TF63 244 aa14.45□□□□□ -0.1
YBX3-201ENST00000228251 IFI27P40305 119 aaPredicted RBP14.45□□□□□ -0.1
YBX3-201ENST00000228251 OR8A1Q8NGG7 326 aa14.45□□□□□ -0.1
YBX3-201ENST00000228251 OR10J6PQ8NGY7 276 aa14.45□□□□□ -0.1
YBX3-201ENST00000228251 SNHG12Q9BXW3 62 aa14.45□□□□□ -0.1
YBX3-201ENST00000228251 HOXA3O43365 443 aaPredicted RBP14.44□□□□□ -0.1
YBX3-201ENST00000228251 NPYP01303 97 aa14.44□□□□□ -0.1
YBX3-201ENST00000228251 ELANEP08246 267 aa14.44□□□□□ -0.1
YBX3-201ENST00000228251 MRPL52Q86TS9 123 aaKnown RBP14.44□□□□□ -0.1
YBX3-201ENST00000228251 UFC1Q9Y3C8 167 aa14.44□□□□□ -0.1
YBX3-201ENST00000228251 IGLC3P0DOY3 106 aa14.43□□□□□ -0.1
YBX3-201ENST00000228251 FA2HQ7L5A8 372 aa14.43□□□□□ -0.1
YBX3-201ENST00000228251 Q8N2B8 174 aa14.43□□□□□ -0.1
YBX3-201ENST00000228251 OR10AG1Q8NH19 301 aa14.43□□□□□ -0.1
YBX3-201ENST00000228251 PRSS3P2Q8NHM4 247 aa14.43□□□□□ -0.1
YBX3-201ENST00000228251 TRAV9-2A0A087WT02 112 aa14.42□□□□□ -0.1
YBX3-201ENST00000228251 LINC01546A6NGU7 62 aa14.42□□□□□ -0.1
YBX3-201ENST00000228251 SMKR1H3BMG3 65 aa14.42□□□□□ -0.1
YBX3-201ENST00000228251 PPBPP02775 128 aa14.42□□□□□ -0.1
YBX3-201ENST00000228251 LGALS1P09382 135 aaKnown RBP14.42□□□□□ -0.1
YBX3-201ENST00000228251 MAJINQ3KP22 176 aa14.42□□□□□ -0.1
YBX3-201ENST00000228251 ATOH7Q8N100 152 aa14.42□□□□□ -0.1
YBX3-201ENST00000228251 F6UB75 175 aa14.42□□□□□ -0.1
YBX3-201ENST00000228251 PLA2G2AP14555 144 aa14.42□□□□□ -0.1
YBX3-201ENST00000228251 CKS2P33552 79 aa14.42□□□□□ -0.1
YBX3-201ENST00000228251 ZNF747Q9BV97 191 aa14.42□□□□□ -0.1
YBX3-201ENST00000228251 HSPB8Q9UJY1 196 aa14.42□□□□□ -0.1
YBX3-201ENST00000228251 ZNF469Q96JG9 3925 aaPredicted RBP14.42□□□□□ -0.1
YBX3-201ENST00000228251 ITPR3Q14573 2671 aa14.41□□□□□ -0.1
YBX3-201ENST00000228251 SAMD13Q5VXD3 122 aa14.41□□□□□ -0.1
YBX3-201ENST00000228251 PET117Q6UWS5 81 aa14.41□□□□□ -0.1
YBX3-201ENST00000228251 DOPEY2Q9Y3R5 2298 aa14.4□□□□□ -0.1
YBX3-201ENST00000228251 C20orf202A1L168 122 aa14.4□□□□□ -0.1
YBX3-201ENST00000228251 LGALS9O00182 355 aa14.4□□□□□ -0.1
YBX3-201ENST00000228251 GAS8-AS1O95177 125 aa14.4□□□□□ -0.1
YBX3-201ENST00000228251 NCR2O95944 276 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms