RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 C8orf31Q8N9H6 132 aa11.12□□□□□ -0.63
SHPK-201ENST00000225519 RAB1BQ9H0U4 201 aa11.12□□□□□ -0.63
SHPK-201ENST00000225519 ZMAT4Q9H898 229 aa11.12□□□□□ -0.63
SHPK-201ENST00000225519 EFNA4P52798 201 aa11.11□□□□□ -0.63
SHPK-201ENST00000225519 DTX2Q86UW9 622 aa11.11□□□□□ -0.63
SHPK-201ENST00000225519 CCDC168Q8NDH2 2452 aa11.11□□□□□ -0.63
SHPK-201ENST00000225519 TMEM238LA0A1B0GVL6 79 aa11.11□□□□□ -0.63
SHPK-201ENST00000225519 ZNF883P0CG24 379 aa11.11□□□□□ -0.63
SHPK-201ENST00000225519 NBL1P41271 181 aa11.11□□□□□ -0.63
SHPK-201ENST00000225519 LAGE3Q14657 143 aa11.11□□□□□ -0.63
SHPK-201ENST00000225519 C16orf97H3BN30 126 aa11.11□□□□□ -0.63
SHPK-201ENST00000225519 ADIPOQQ15848 244 aa11.11□□□□□ -0.63
SHPK-201ENST00000225519 IGLC6P0CF74 106 aa11.1□□□□□ -0.63
SHPK-201ENST00000225519 ERCC8Q13216 396 aa11.1□□□□□ -0.63
SHPK-201ENST00000225519 TCTEX1D4Q5JR98 221 aa11.1□□□□□ -0.63
SHPK-201ENST00000225519 GFRALQ6UXV0 394 aa11.1□□□□□ -0.63
SHPK-201ENST00000225519 TRAV26-2A0A0B4J265 109 aa11.1□□□□□ -0.63
SHPK-201ENST00000225519 CRYGBP07316 175 aa11.1□□□□□ -0.63
SHPK-201ENST00000225519 BUB1B-PAK6H3BSN5 160 aa11.09□□□□□ -0.63
SHPK-201ENST00000225519 CD59P13987 128 aa11.09□□□□□ -0.63
SHPK-201ENST00000225519 C8orf86Q6ZUL3 223 aa11.09□□□□□ -0.63
SHPK-201ENST00000225519 PKD1L2Q7Z442 2459 aa11.09□□□□□ -0.63
SHPK-201ENST00000225519 PLNP26678 52 aa11.09□□□□□ -0.63
SHPK-201ENST00000225519 SPANXN1Q5VSR9 72 aa11.09□□□□□ -0.63
SHPK-201ENST00000225519 DLX4Q92988 240 aaPredicted RBP11.09□□□□□ -0.63
SHPK-201ENST00000225519 ZNF292O60281 2723 aa11.09□□□□□ -0.63
SHPK-201ENST00000225519 H3BVH4 76 aa11.09□□□□□ -0.63
SHPK-201ENST00000225519 FOXI1Q12951 378 aa11.09□□□□□ -0.63
SHPK-201ENST00000225519 RAXQ9Y2V3 346 aa11.09□□□□□ -0.63
SHPK-201ENST00000225519 A0A087WX48 190 aa11.08□□□□□ -0.64
SHPK-201ENST00000225519 MRPS12O15235 138 aaKnown RBP11.08□□□□□ -0.64
SHPK-201ENST00000225519 SCGB2A1O75556 95 aa11.08□□□□□ -0.64
SHPK-201ENST00000225519 HIF1ANQ9NWT6 349 aa11.08□□□□□ -0.64
SHPK-201ENST00000225519 A6NJY4 79 aa11.08□□□□□ -0.64
SHPK-201ENST00000225519 ONECUT1Q9UBC0 465 aa11.08□□□□□ -0.64
SHPK-201ENST00000225519 TIMM23O14925 209 aa11.08□□□□□ -0.64
SHPK-201ENST00000225519 TGFAP01135 160 aa11.08□□□□□ -0.64
SHPK-201ENST00000225519 BSPH1Q075Z2 132 aa11.08□□□□□ -0.64
SHPK-201ENST00000225519 VKORC1Q9BQB6 163 aa11.08□□□□□ -0.64
SHPK-201ENST00000225519 C21orf62Q9NYP8 219 aa11.08□□□□□ -0.64
SHPK-201ENST00000225519 MYMXA0A1B0GTQ4 84 aa11.07□□□□□ -0.64
SHPK-201ENST00000225519 LINC01549A6NIU2 74 aa11.07□□□□□ -0.64
SHPK-201ENST00000225519 DLX6P56179 175 aa11.07□□□□□ -0.64
SHPK-201ENST00000225519 SCGB3A1Q96QR1 104 aa11.07□□□□□ -0.64
SHPK-201ENST00000225519 C1QTNF4Q9BXJ3 329 aa11.07□□□□□ -0.64
SHPK-201ENST00000225519 FAM215AQ9Y5M1 114 aa11.07□□□□□ -0.64
SHPK-201ENST00000225519 IGFBPL1Q8WX77 278 aa11.07□□□□□ -0.64
SHPK-201ENST00000225519 RALYQ9UKM9 306 aaKnown RBP11.07□□□□□ -0.64
SHPK-201ENST00000225519 MED13LQ71F56 2210 aa11.07□□□□□ -0.64
SHPK-201ENST00000225519 TRGV3P03979 118 aa11.07□□□□□ -0.64
SHPK-201ENST00000225519 ARL3P36405 182 aa11.07□□□□□ -0.64
SHPK-201ENST00000225519 C3orf36Q3SXR2 165 aa11.07□□□□□ -0.64
SHPK-201ENST00000225519 GLMPQ8WWB7 406 aa11.07□□□□□ -0.64
SHPK-201ENST00000225519 H7C1H1 209 aa11.06□□□□□ -0.64
SHPK-201ENST00000225519 NUP37Q8NFH4 326 aa11.06□□□□□ -0.64
SHPK-201ENST00000225519 ZNF48Q96MX3 618 aaPredicted RBP11.06□□□□□ -0.64
SHPK-201ENST00000225519 LRRK2Q5S007 2527 aa11.06□□□□□ -0.64
SHPK-201ENST00000225519 MT-ATP8P03928 68 aa11.06□□□□□ -0.64
SHPK-201ENST00000225519 SCGB1C2P0DMR2 95 aa11.06□□□□□ -0.64
SHPK-201ENST00000225519 ZNF815PA8K554 130 aa11.06□□□□□ -0.64
SHPK-201ENST00000225519 PTH2Q96A98 100 aa11.06□□□□□ -0.64
SHPK-201ENST00000225519 IGHV3OR16-13A0A075B7E8 117 aa11.05□□□□□ -0.64
SHPK-201ENST00000225519 IGHV3-74A0A0B4J1X5 117 aa11.05□□□□□ -0.64
SHPK-201ENST00000225519 F8VRH5 84 aa11.05□□□□□ -0.64
SHPK-201ENST00000225519 HLA-DRB4P13762 266 aa11.05□□□□□ -0.64
SHPK-201ENST00000225519 IL17RELQ6ZVW7 336 aa11.05□□□□□ -0.64
SHPK-201ENST00000225519 DYNAPQ8N1N2 210 aa11.05□□□□□ -0.64
SHPK-201ENST00000225519 HLA-DRB4X5D2U9 266 aa11.05□□□□□ -0.64
SHPK-201ENST00000225519 IGHV3-66A0A0C4DH42 116 aa11.05□□□□□ -0.64
SHPK-201ENST00000225519 LYNX1G3V0Z9 82 aa11.05□□□□□ -0.64
SHPK-201ENST00000225519 NBR2O15453 112 aa11.05□□□□□ -0.64
SHPK-201ENST00000225519 THBDP07204 575 aa11.05□□□□□ -0.64
SHPK-201ENST00000225519 LYNX1P0DP58 116 aa11.05□□□□□ -0.64
SHPK-201ENST00000225519 TMEM78Q5T7P6 136 aa11.05□□□□□ -0.64
SHPK-201ENST00000225519 PRO0461Q9UI25 63 aa11.05□□□□□ -0.64
SHPK-201ENST00000225519 LOC400499M0QZD8 3231 aa11.04□□□□□ -0.64
SHPK-201ENST00000225519 IGLV1-47P01700 117 aa11.04□□□□□ -0.64
SHPK-201ENST00000225519 LYRM7Q5U5X0 104 aa11.04□□□□□ -0.64
SHPK-201ENST00000225519 CFHR4Q92496 578 aa11.04□□□□□ -0.64
SHPK-201ENST00000225519 J3KRW8 73 aa11.04□□□□□ -0.64
SHPK-201ENST00000225519 KLRD1Q13241 179 aa11.04□□□□□ -0.64
SHPK-201ENST00000225519 RNF182Q8N6D2 247 aa11.04□□□□□ -0.64
SHPK-201ENST00000225519 TRBV7-3A0A075B6L6 115 aa11.04□□□□□ -0.64
SHPK-201ENST00000225519 RNASE6Q93091 150 aaKnown RBP11.04□□□□□ -0.64
SHPK-201ENST00000225519 ANAPC13Q9BS18 74 aa11.03□□□□□ -0.64
SHPK-201ENST00000225519 PRAC2D3DTV9 90 aa11.03□□□□□ -0.64
SHPK-201ENST00000225519 SRSF8Q9BRL6 282 aaKnown RBP11.03□□□□□ -0.64
SHPK-201ENST00000225519 PRADC1Q9BSG0 188 aa11.02□□□□□ -0.64
SHPK-201ENST00000225519 MORN3Q6PF18 240 aaPredicted RBP11.02□□□□□ -0.65
SHPK-201ENST00000225519 Q6ZUT4 128 aa11.02□□□□□ -0.65
SHPK-201ENST00000225519 IGHV3-49A0A0A0MS15 119 aa11.01□□□□□ -0.65
SHPK-201ENST00000225519 ZFP2Q6ZN57 461 aa11.01□□□□□ -0.65
SHPK-201ENST00000225519 PPDPFLQ8WWR9 84 aa11.01□□□□□ -0.65
SHPK-201ENST00000225519 LGALS1P09382 135 aaKnown RBP11.01□□□□□ -0.65
SHPK-201ENST00000225519 RNF183Q96D59 192 aa11.01□□□□□ -0.65
SHPK-201ENST00000225519 RNF5Q99942 180 aa11.01□□□□□ -0.65
SHPK-201ENST00000225519 ZFHX4Q86UP3 3567 aa11.01□□□□□ -0.65
SHPK-201ENST00000225519 SLC25A16P16260 332 aa11.01□□□□□ -0.65
SHPK-201ENST00000225519 CFAP126Q5VTH2 177 aa11.01□□□□□ -0.65
SHPK-201ENST00000225519 KAAG1Q9UBP8 84 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms