RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 CGB7P0DN87 165 aa14.55□□□□□ -0.08
CLIP2-201ENST00000223398 PTPN13Q12923 2485 aa14.55□□□□□ -0.08
CLIP2-201ENST00000223398 ZNF491Q8N8L2 437 aa14.55□□□□□ -0.08
CLIP2-201ENST00000223398 DAZAP2Q15038 168 aaPredicted RBP14.54□□□□□ -0.08
CLIP2-201ENST00000223398 ZFP36P26651 326 aaKnown RBP14.54□□□□□ -0.08
CLIP2-201ENST00000223398 VWC2Q2TAL6 325 aa14.54□□□□□ -0.08
CLIP2-201ENST00000223398 ZC2HC1BQ5TFG8 222 aa14.54□□□□□ -0.08
CLIP2-201ENST00000223398 C2orf16Q68DN1 1984 aa14.54□□□□□ -0.08
CLIP2-201ENST00000223398 IGLC7A0M8Q6 106 aa14.54□□□□□ -0.08
CLIP2-201ENST00000223398 LAMTOR3Q9UHA4 124 aa14.54□□□□□ -0.08
CLIP2-201ENST00000223398 H3BUA1 57 aa14.54□□□□□ -0.08
CLIP2-201ENST00000223398 HIST3H2BBQ8N257 126 aa14.53□□□□□ -0.08
CLIP2-201ENST00000223398 MYMXA0A1B0GTQ4 84 aa14.53□□□□□ -0.08
CLIP2-201ENST00000223398 WIPF3A6NGB9 483 aa14.53□□□□□ -0.08
CLIP2-201ENST00000223398 I3L3M4 83 aa14.53□□□□□ -0.08
CLIP2-201ENST00000223398 PFN2P35080 140 aa14.53□□□□□ -0.08
CLIP2-201ENST00000223398 GFRA4Q9GZZ7 299 aa14.53□□□□□ -0.08
CLIP2-201ENST00000223398 SDHAF1A6NFY7 115 aa14.53□□□□□ -0.08
CLIP2-201ENST00000223398 GP9P14770 177 aa14.53□□□□□ -0.08
CLIP2-201ENST00000223398 ZNF726P1Q15940 193 aa14.52□□□□□ -0.08
CLIP2-201ENST00000223398 IGHV7-81A0A0B4J1V7 117 aa14.52□□□□□ -0.08
CLIP2-201ENST00000223398 RNF138Q8WVD3 245 aa14.52□□□□□ -0.08
CLIP2-201ENST00000223398 TMEM243Q9BU79 118 aa14.52□□□□□ -0.08
CLIP2-201ENST00000223398 PRO3102Q9H379 93 aa14.52□□□□□ -0.08
CLIP2-201ENST00000223398 A0A1B0GUS0 222 aa14.52□□□□□ -0.09
CLIP2-201ENST00000223398 C9orf66Q5T8R8 295 aa14.52□□□□□ -0.09
CLIP2-201ENST00000223398 PRSS46E5RG02 174 aa14.52□□□□□ -0.09
CLIP2-201ENST00000223398 ZNF492Q9P255 531 aa14.52□□□□□ -0.09
CLIP2-201ENST00000223398 ATRXP46100 2492 aa14.52□□□□□ -0.09
CLIP2-201ENST00000223398 LINC01559Q495D7 138 aa14.52□□□□□ -0.09
CLIP2-201ENST00000223398 ZNF479Q96JC4 524 aa14.52□□□□□ -0.09
CLIP2-201ENST00000223398 PLCE1Q9P212 2302 aa14.51□□□□□ -0.09
CLIP2-201ENST00000223398 ANGP03950 147 aaKnown RBP14.51□□□□□ -0.09
CLIP2-201ENST00000223398 C3orf79P0CE67 100 aa14.51□□□□□ -0.09
CLIP2-201ENST00000223398 BCL6BQ8N143 479 aaPredicted RBP14.51□□□□□ -0.09
CLIP2-201ENST00000223398 PIFOQ8TCI5 191 aa14.51□□□□□ -0.09
CLIP2-201ENST00000223398 TMEM14CQ9P0S9 112 aa14.51□□□□□ -0.09
CLIP2-201ENST00000223398 DOCK11Q5JSL3 2073 aa14.51□□□□□ -0.09
CLIP2-201ENST00000223398 C2orf66Q6UXQ4 117 aa14.51□□□□□ -0.09
CLIP2-201ENST00000223398 AJUBAQ96IF1 538 aa14.51□□□□□ -0.09
CLIP2-201ENST00000223398 PRORYQ9H606 182 aa14.51□□□□□ -0.09
CLIP2-201ENST00000223398 COL4A3Q01955 1670 aa14.51□□□□□ -0.09
CLIP2-201ENST00000223398 LEPROTO15243 131 aa14.51□□□□□ -0.09
CLIP2-201ENST00000223398 SPRY2O43597 315 aa14.51□□□□□ -0.09
CLIP2-201ENST00000223398 FOXE3Q13461 319 aa14.51□□□□□ -0.09
CLIP2-201ENST00000223398 THAP8Q8NA92 274 aa14.51□□□□□ -0.09
CLIP2-201ENST00000223398 CACNA1AO00555 2505 aa14.5□□□□□ -0.09
CLIP2-201ENST00000223398 F8WEM9 126 aa14.5□□□□□ -0.09
CLIP2-201ENST00000223398 ZNF114Q8NC26 417 aa14.5□□□□□ -0.09
CLIP2-201ENST00000223398 ZC2HC1AQ96GY0 325 aa14.5□□□□□ -0.09
CLIP2-201ENST00000223398 HSD52Q0P140 79 aa14.5□□□□□ -0.09
CLIP2-201ENST00000223398 C8orf31Q8N9H6 132 aa14.5□□□□□ -0.09
CLIP2-201ENST00000223398 ATP6V0BQ99437 205 aa14.5□□□□□ -0.09
CLIP2-201ENST00000223398 PRSS57Q6UWY2 283 aa14.5□□□□□ -0.09
CLIP2-201ENST00000223398 FOXI2Q6ZQN5 318 aa14.5□□□□□ -0.09
CLIP2-201ENST00000223398 C19orf84I3L1E1 186 aa14.5□□□□□ -0.09
CLIP2-201ENST00000223398 NXPH4O95158 308 aa14.5□□□□□ -0.09
CLIP2-201ENST00000223398 SYS1-DBNDD2H3BUS1 97 aa14.49□□□□□ -0.09
CLIP2-201ENST00000223398 GNRH2O43555 120 aa14.49□□□□□ -0.09
CLIP2-201ENST00000223398 FAM104BQ5XKR9 115 aa14.49□□□□□ -0.09
CLIP2-201ENST00000223398 EREGO14944 169 aa14.49□□□□□ -0.09
CLIP2-201ENST00000223398 FXYD5Q96DB9 178 aa14.49□□□□□ -0.09
CLIP2-201ENST00000223398 CHAC1Q9BUX1 264 aa14.49□□□□□ -0.09
CLIP2-201ENST00000223398 HIST2H2BCQ6DN03 193 aa14.49□□□□□ -0.09
CLIP2-201ENST00000223398 DYSFO75923 2080 aa14.49□□□□□ -0.09
CLIP2-201ENST00000223398 C9JQL5 133 aa14.49□□□□□ -0.09
CLIP2-201ENST00000223398 CDK2AP2O75956 126 aa14.49□□□□□ -0.09
CLIP2-201ENST00000223398 ATXN8Q156A1 80 aa14.49□□□□□ -0.09
CLIP2-201ENST00000223398 DYNAPQ8N1N2 210 aa14.49□□□□□ -0.09
CLIP2-201ENST00000223398 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.48□□□□□ -0.09
CLIP2-201ENST00000223398 RNASE13Q5GAN3 156 aaKnown RBP14.48□□□□□ -0.09
CLIP2-201ENST00000223398 Q9HAA7 133 aa14.48□□□□□ -0.09
CLIP2-201ENST00000223398 HLA-DRB4P13762 266 aa14.48□□□□□ -0.09
CLIP2-201ENST00000223398 U3KQE9 123 aa14.48□□□□□ -0.09
CLIP2-201ENST00000223398 HLA-DRB4X5D2U9 266 aa14.48□□□□□ -0.09
CLIP2-201ENST00000223398 PMVKQ15126 192 aa14.48□□□□□ -0.09
CLIP2-201ENST00000223398 A0A087X0K7 114 aa14.47□□□□□ -0.09
CLIP2-201ENST00000223398 POU2AF1Q16633 256 aa14.47□□□□□ -0.09
CLIP2-201ENST00000223398 CSPG4Q6UVK1 2322 aa14.47□□□□□ -0.09
CLIP2-201ENST00000223398 HIVEP2P31629 2446 aa14.47□□□□□ -0.09
CLIP2-201ENST00000223398 IGKV1OR2-108A0A075B7D4 117 aa14.47□□□□□ -0.09
CLIP2-201ENST00000223398 MRPL51Q4U2R6 128 aaKnown RBP14.47□□□□□ -0.09
CLIP2-201ENST00000223398 STPG4Q8N801 248 aa14.47□□□□□ -0.09
CLIP2-201ENST00000223398 ESDP10768 282 aa14.46□□□□□ -0.09
CLIP2-201ENST00000223398 IGHV4OR15-8A0A075B7B6 117 aa14.46□□□□□ -0.09
CLIP2-201ENST00000223398 A0A087WW49 117 aa14.46□□□□□ -0.09
CLIP2-201ENST00000223398 UBE2CO00762 179 aa14.46□□□□□ -0.09
CLIP2-201ENST00000223398 DLX4Q92988 240 aaPredicted RBP14.46□□□□□ -0.09
CLIP2-201ENST00000223398 ESM1Q9NQ30 184 aa14.46□□□□□ -0.09
CLIP2-201ENST00000223398 ADCYAP1P18509 176 aa14.46□□□□□ -0.09
CLIP2-201ENST00000223398 Q6ZQT7 251 aa14.46□□□□□ -0.09
CLIP2-201ENST00000223398 IGKV2D-24A0A075B6R9 120 aa14.46□□□□□ -0.1
CLIP2-201ENST00000223398 SAMD5Q5TGI4 173 aa14.45□□□□□ -0.1
CLIP2-201ENST00000223398 NKAPP1Q8N9T2 125 aa14.45□□□□□ -0.1
CLIP2-201ENST00000223398 MRPL53Q96EL3 112 aaKnown RBP14.45□□□□□ -0.1
CLIP2-201ENST00000223398 MEGF9Q9H1U4 602 aa14.45□□□□□ -0.1
CLIP2-201ENST00000223398 AGPAT4-IT1Q9H0P7 198 aa14.45□□□□□ -0.1
CLIP2-201ENST00000223398 NPBQ8NG41 125 aa14.44□□□□□ -0.1
CLIP2-201ENST00000223398 C5orf56Q8N8D9 126 aa14.44□□□□□ -0.1
CLIP2-201ENST00000223398 MSMPQ1L6U9 139 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms