RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 MAP1LC3B2A6NCE7 125 aa9□□□□□ -0.97
LSM5-201ENST00000223084 LYRM9A8MSI8 78 aa9□□□□□ -0.97
LSM5-201ENST00000223084 LY6G6CO95867 125 aa9□□□□□ -0.97
LSM5-201ENST00000223084 NMBP08949 121 aa9□□□□□ -0.97
LSM5-201ENST00000223084 SEC11BP0C7V7 166 aa9□□□□□ -0.97
LSM5-201ENST00000223084 DEFB130BP0DP73 79 aa9□□□□□ -0.97
LSM5-201ENST00000223084 DEFB130AP0DP74 79 aa9□□□□□ -0.97
LSM5-201ENST00000223084 ZNF493Q6ZR52 646 aa9□□□□□ -0.97
LSM5-201ENST00000223084 C5orf17Q8NAS9 161 aa9□□□□□ -0.97
LSM5-201ENST00000223084 TMED6Q8WW62 240 aa9□□□□□ -0.97
LSM5-201ENST00000223084 LINC00476Q8WZB0 136 aa9□□□□□ -0.97
LSM5-201ENST00000223084 TVP23CQ96ET8 276 aa9□□□□□ -0.97
LSM5-201ENST00000223084 PYGO2Q9BRQ0 406 aa9□□□□□ -0.97
LSM5-201ENST00000223084 MAP1LC3BQ9GZQ8 125 aa9□□□□□ -0.97
LSM5-201ENST00000223084 APLNQ9ULZ1 77 aa9□□□□□ -0.97
LSM5-201ENST00000223084 IGHV4-4A0A075B6R2 117 aa8.99□□□□□ -0.97
LSM5-201ENST00000223084 TRBV7-9A0A0J9YWB2 115 aa8.99□□□□□ -0.97
LSM5-201ENST00000223084 CBY3A6NI87 242 aa8.99□□□□□ -0.97
LSM5-201ENST00000223084 TCRAP04437 139 aa8.99□□□□□ -0.97
LSM5-201ENST00000223084 ARL6IP6Q8N6S5 226 aa8.99□□□□□ -0.97
LSM5-201ENST00000223084 FAM213BQ8TBF2 198 aa8.99□□□□□ -0.97
LSM5-201ENST00000223084 PGPEP1Q9NXJ5 209 aa8.99□□□□□ -0.97
LSM5-201ENST00000223084 TP53TG3Q9ULZ0 132 aa8.99□□□□□ -0.97
LSM5-201ENST00000223084 TIMM8BQ9Y5J9 83 aaPredicted RBP8.99□□□□□ -0.97
LSM5-201ENST00000223084 HYDINQ4G0P3 5121 aa8.99□□□□□ -0.97
LSM5-201ENST00000223084 A0A1B0GV50 99 aa8.98□□□□□ -0.97
LSM5-201ENST00000223084 A0A1W2PRE2 83 aa8.98□□□□□ -0.97
LSM5-201ENST00000223084 F6UZH7 168 aa8.98□□□□□ -0.97
LSM5-201ENST00000223084 RGS13O14921 159 aa8.98□□□□□ -0.97
LSM5-201ENST00000223084 TPT1P13693 172 aaKnown RBP8.98□□□□□ -0.97
LSM5-201ENST00000223084 EIF5AP63241 154 aaKnown RBP8.98□□□□□ -0.97
LSM5-201ENST00000223084 MUC21Q5SSG8 566 aa8.98□□□□□ -0.97
LSM5-201ENST00000223084 EIF4E3Q8N5X7 224 aaKnown RBP8.98□□□□□ -0.97
LSM5-201ENST00000223084 GSN-AS1Q9NRJ2 163 aa8.98□□□□□ -0.97
LSM5-201ENST00000223084 EPDR1Q9UM22 224 aa8.98□□□□□ -0.97
LSM5-201ENST00000223084 IGHV1OR15-1A0A075B7D0 117 aa8.97□□□□□ -0.97
LSM5-201ENST00000223084 FAM74A7A6NL05 159 aa8.97□□□□□ -0.97
LSM5-201ENST00000223084 SNURFLB1AK76 121 aa8.97□□□□□ -0.97
LSM5-201ENST00000223084 UMAD1C9J7I0 102 aa8.97□□□□□ -0.97
LSM5-201ENST00000223084 ANXA2RQ3ZCQ2 193 aa8.97□□□□□ -0.97
LSM5-201ENST00000223084 C9orf62Q8N4C0 152 aa8.97□□□□□ -0.97
LSM5-201ENST00000223084 C11orf72Q8NBR9 251 aa8.97□□□□□ -0.97
LSM5-201ENST00000223084 STOML3Q8TAV4 291 aa8.97□□□□□ -0.97
LSM5-201ENST00000223084 SFT2D1Q8WV19 159 aa8.97□□□□□ -0.97
LSM5-201ENST00000223084 LINC00479Q96M42 142 aa8.97□□□□□ -0.97
LSM5-201ENST00000223084 LINC00467Q9BRT7 94 aa8.97□□□□□ -0.97
LSM5-201ENST00000223084 TREM1Q9NP99 234 aa8.97□□□□□ -0.97
LSM5-201ENST00000223084 LENEPQ9Y5L5 61 aa8.97□□□□□ -0.97
LSM5-201ENST00000223084 TRAV34A0A0B4J273 112 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 GAGE12BA1L429 117 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 J3QL48 77 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 GAGE7O76087 117 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 IFNA7P01567 189 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 IGLV2-11P01706 119 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 GAGE12FP0CL80 117 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 GAGE12GP0CL81 117 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 GAGE12IP0CL82 117 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 Q6AWC8 147 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 PRNTQ86SH4 94 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 CYB561D1Q8N8Q1 229 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 MBD3L1Q8WWY6 194 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 C8orf49Q96NF6 230 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 ATG101Q9BSB4 218 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 PSG8Q9UQ74 426 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 KLF12Q9Y4X4 402 aa8.96□□□□□ -0.98
LSM5-201ENST00000223084 SERTM2A0A1B0GWG4 89 aa8.95□□□□□ -0.98
LSM5-201ENST00000223084 F5H768 121 aa8.95□□□□□ -0.98
LSM5-201ENST00000223084 K7EQM0 130 aa8.95□□□□□ -0.98
LSM5-201ENST00000223084 TCTAP57738 103 aa8.95□□□□□ -0.98
LSM5-201ENST00000223084 FLI1Q01543 452 aaPredicted RBP8.95□□□□□ -0.98
LSM5-201ENST00000223084 Q6ZTI0 123 aa8.95□□□□□ -0.98
LSM5-201ENST00000223084 ZNF680Q8NEM1 530 aa8.95□□□□□ -0.98
LSM5-201ENST00000223084 NDUFAF3Q9BU61 184 aa8.95□□□□□ -0.98
LSM5-201ENST00000223084 NAGKQ9UJ70 344 aa8.95□□□□□ -0.98
LSM5-201ENST00000223084 VPS13DQ5THJ4 4388 aa8.95□□□□□ -0.98
LSM5-201ENST00000223084 PEX7O00628 323 aa8.94□□□□□ -0.98
LSM5-201ENST00000223084 PAGE4O60829 102 aa8.94□□□□□ -0.98
LSM5-201ENST00000223084 ATP5G1P05496 136 aa8.94□□□□□ -0.98
LSM5-201ENST00000223084 H2AFB1P0C5Y9 115 aa8.94□□□□□ -0.98
LSM5-201ENST00000223084 ATP5G3P48201 142 aa8.94□□□□□ -0.98
LSM5-201ENST00000223084 ZNF80P51504 273 aaPredicted RBP8.94□□□□□ -0.98
LSM5-201ENST00000223084 TCL1AP56279 114 aa8.94□□□□□ -0.98
LSM5-201ENST00000223084 DAZ2Q13117 558 aaKnown RBP8.94□□□□□ -0.98
LSM5-201ENST00000223084 CST9LP1Q5W188 147 aa8.94□□□□□ -0.98
LSM5-201ENST00000223084 LGALS9CQ6DKI2 356 aa8.94□□□□□ -0.98
LSM5-201ENST00000223084 TMEM88Q6PEY1 159 aa8.94□□□□□ -0.98
LSM5-201ENST00000223084 DPPA3Q6W0C5 159 aa8.94□□□□□ -0.98
LSM5-201ENST00000223084 LINC00612Q8N6U2 182 aa8.94□□□□□ -0.98
LSM5-201ENST00000223084 TMEM75Q8N9X5 138 aa8.94□□□□□ -0.98
LSM5-201ENST00000223084 NDFIP1Q9BT67 221 aa8.94□□□□□ -0.98
LSM5-201ENST00000223084 TRGV1A0A0A0MS02 117 aa8.93□□□□□ -0.98
LSM5-201ENST00000223084 NKX2-5P52952 324 aaPredicted RBP8.93□□□□□ -0.98
LSM5-201ENST00000223084 TMEM183BQ1AE95 376 aa8.93□□□□□ -0.98
LSM5-201ENST00000223084 SLC51BQ86UW2 128 aa8.93□□□□□ -0.98
LSM5-201ENST00000223084 TMEM183AQ8IXX5 376 aa8.93□□□□□ -0.98
LSM5-201ENST00000223084 NKX6-2Q9C056 277 aaPredicted RBP8.93□□□□□ -0.98
LSM5-201ENST00000223084 MDFICQ9P1T7 246 aa8.93□□□□□ -0.98
LSM5-201ENST00000223084 TRAV21A0A0B4J279 112 aa8.92□□□□□ -0.98
LSM5-201ENST00000223084 GNRH2O43555 120 aa8.92□□□□□ -0.98
LSM5-201ENST00000223084 CCL20P78556 96 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms