RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 PGPA6NDG6 321 aa10.62□□□□□ -0.71
PCOLCE-201ENST00000223061 RBMY1A1P0DJD3 496 aaKnown RBP10.62□□□□□ -0.71
PCOLCE-201ENST00000223061 RBMY1CP0DJD4 496 aa10.62□□□□□ -0.71
PCOLCE-201ENST00000223061 CDKN1BP46527 198 aa10.62□□□□□ -0.71
PCOLCE-201ENST00000223061 RBMY1FQ15415 496 aaKnown RBP10.62□□□□□ -0.71
PCOLCE-201ENST00000223061 VGLL1Q99990 258 aa10.62□□□□□ -0.71
PCOLCE-201ENST00000223061 AGPAT4-IT1Q9H0P7 198 aa10.62□□□□□ -0.71
PCOLCE-201ENST00000223061 C11orf68Q9H3H3 251 aaKnown RBP10.62□□□□□ -0.71
PCOLCE-201ENST00000223061 SDF2L1Q9HCN8 221 aa10.62□□□□□ -0.71
PCOLCE-201ENST00000223061 RPH3ALQ9UNE2 315 aa10.62□□□□□ -0.71
PCOLCE-201ENST00000223061 TSPOP30536 169 aa10.61□□□□□ -0.71
PCOLCE-201ENST00000223061 KIR3DS1Q14943 382 aa10.61□□□□□ -0.71
PCOLCE-201ENST00000223061 IL17DQ8TAD2 202 aa10.61□□□□□ -0.71
PCOLCE-201ENST00000223061 CMTM2Q8TAZ6 248 aa10.61□□□□□ -0.71
PCOLCE-201ENST00000223061 TMPRSS5Q9H3S3 457 aa10.61□□□□□ -0.71
PCOLCE-201ENST00000223061 TMEM167BQ9NRX6 74 aa10.61□□□□□ -0.71
PCOLCE-201ENST00000223061 C3orf84H3BNL1 204 aa10.61□□□□□ -0.71
PCOLCE-201ENST00000223061 LEPP41159 167 aa10.61□□□□□ -0.71
PCOLCE-201ENST00000223061 RAB5BP61020 215 aa10.61□□□□□ -0.71
PCOLCE-201ENST00000223061 TMEM78Q5T7P6 136 aa10.61□□□□□ -0.71
PCOLCE-201ENST00000223061 C9orf47Q6ZRZ4 202 aa10.61□□□□□ -0.71
PCOLCE-201ENST00000223061 LINC00477Q96M19 166 aa10.61□□□□□ -0.71
PCOLCE-201ENST00000223061 NAT8Q9UHE5 227 aa10.61□□□□□ -0.71
PCOLCE-201ENST00000223061 ZNF727A8MUV8 499 aa10.6□□□□□ -0.71
PCOLCE-201ENST00000223061 DIRC3C9JPN6 131 aa10.6□□□□□ -0.71
PCOLCE-201ENST00000223061 PDE6DO43924 150 aa10.6□□□□□ -0.71
PCOLCE-201ENST00000223061 RAB5AP20339 215 aa10.6□□□□□ -0.71
PCOLCE-201ENST00000223061 ISOC2Q96AB3 205 aa10.6□□□□□ -0.71
PCOLCE-201ENST00000223061 ODF3Q96PU9 254 aa10.6□□□□□ -0.71
PCOLCE-201ENST00000223061 CTDSP1Q9GZU7 261 aa10.6□□□□□ -0.71
PCOLCE-201ENST00000223061 C1orf196B1AJZ1 125 aa10.59□□□□□ -0.71
PCOLCE-201ENST00000223061 SLC25A5P05141 298 aaKnown RBP10.59□□□□□ -0.71
PCOLCE-201ENST00000223061 EMP1P54849 157 aa10.59□□□□□ -0.71
PCOLCE-201ENST00000223061 GNG5P63218 68 aa10.59□□□□□ -0.71
PCOLCE-201ENST00000223061 SMUG1Q53HV7 270 aa10.59□□□□□ -0.71
PCOLCE-201ENST00000223061 GFI1BQ5VTD9 330 aa10.59□□□□□ -0.71
PCOLCE-201ENST00000223061 Q8TAT8 98 aa10.59□□□□□ -0.71
PCOLCE-201ENST00000223061 LINC01587Q99440 93 aa10.59□□□□□ -0.71
PCOLCE-201ENST00000223061 NEU1Q99519 415 aa10.59□□□□□ -0.71
PCOLCE-201ENST00000223061 BIN3Q9NQY0 253 aa10.59□□□□□ -0.71
PCOLCE-201ENST00000223061 SMIM9A6NGZ8 99 aa10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 PAGE4O60829 102 aa10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 PRM2P04554 102 aa10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 UBE2G2P60604 165 aa10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 TMEM241Q24JQ0 296 aa10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 GOLT1AQ6ZVE7 132 aa10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 C11orf45Q8TAV5 145 aa10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 SMIM7Q9BQ49 75 aa10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 ARL2-SNX15V9GYD0 113 aa10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 ZNF705GA8MUZ8 300 aaPredicted RBP10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 GGTLC3B5MD39 225 aa10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 C11orf94C9JXX5 98 aa10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 F6UZH7 168 aa10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 ZNF138P52744 262 aa10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 NANOS2P60321 138 aaKnown RBP10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 RRN3P1Q2M238 152 aa10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 CASC10Q5T4H9 136 aa10.58□□□□□ -0.72
PCOLCE-201ENST00000223061 TRAV12-3A0A0B4J271 114 aa10.57□□□□□ -0.72
PCOLCE-201ENST00000223061 RBAKDNA6NC62 111 aa10.57□□□□□ -0.72
PCOLCE-201ENST00000223061 HTN1P15515 57 aa10.57□□□□□ -0.72
PCOLCE-201ENST00000223061 SUMO1P63165 101 aaKnown RBP10.57□□□□□ -0.72
PCOLCE-201ENST00000223061 FAM19A4Q96LR4 140 aa10.57□□□□□ -0.72
PCOLCE-201ENST00000223061 PARLQ9H300 379 aa10.57□□□□□ -0.72
PCOLCE-201ENST00000223061 ZNF492Q9P255 531 aa10.57□□□□□ -0.72
PCOLCE-201ENST00000223061 YTHDF2Q9Y5A9 579 aaKnown RBP10.57□□□□□ -0.72
PCOLCE-201ENST00000223061 RNASE4P34096 147 aaKnown RBP10.56□□□□□ -0.72
PCOLCE-201ENST00000223061 ELOBQ15370 118 aa10.56□□□□□ -0.72
PCOLCE-201ENST00000223061 TMEM256Q8N2U0 113 aa10.56□□□□□ -0.72
PCOLCE-201ENST00000223061 C5orf17Q8NAS9 161 aa10.56□□□□□ -0.72
PCOLCE-201ENST00000223061 A0A1W2PRE2 83 aa10.55□□□□□ -0.72
PCOLCE-201ENST00000223061 C7orf71A4D174 169 aa10.55□□□□□ -0.72
PCOLCE-201ENST00000223061 GPX1P07203 203 aa10.55□□□□□ -0.72
PCOLCE-201ENST00000223061 CELA1Q9UNI1 258 aa10.55□□□□□ -0.72
PCOLCE-201ENST00000223061 STARD9Q9P2P6 4700 aa10.55□□□□□ -0.72
PCOLCE-201ENST00000223061 TRAV8-1A0A0A6YYK1 113 aa10.55□□□□□ -0.72
PCOLCE-201ENST00000223061 TMEM189A5PLL7 270 aa10.55□□□□□ -0.72
PCOLCE-201ENST00000223061 KLLNB2CW77 178 aa10.55□□□□□ -0.72
PCOLCE-201ENST00000223061 H7BYZ3 331 aa10.55□□□□□ -0.72
PCOLCE-201ENST00000223061 CRISP2P16562 243 aa10.55□□□□□ -0.72
PCOLCE-201ENST00000223061 TAS2R60P59551 318 aa10.55□□□□□ -0.72
PCOLCE-201ENST00000223061 RPL23P62829 140 aaKnown RBP10.55□□□□□ -0.72
PCOLCE-201ENST00000223061 ZFAND2AQ8N6M9 145 aa10.55□□□□□ -0.72
PCOLCE-201ENST00000223061 SGK494Q96LW2 274 aa10.55□□□□□ -0.72
PCOLCE-201ENST00000223061 C20orf144Q9BQM9 153 aa10.55□□□□□ -0.72
PCOLCE-201ENST00000223061 TCRAP04437 139 aa10.54□□□□□ -0.72
PCOLCE-201ENST00000223061 AZU1P20160 251 aa10.54□□□□□ -0.72
PCOLCE-201ENST00000223061 PRR9Q5T870 116 aa10.54□□□□□ -0.72
PCOLCE-201ENST00000223061 ARL6IP6Q8N6S5 226 aa10.54□□□□□ -0.72
PCOLCE-201ENST00000223061 EPDR1Q9UM22 224 aa10.54□□□□□ -0.72
PCOLCE-201ENST00000223061 CSMD3Q7Z407 3707 aa10.54□□□□□ -0.72
PCOLCE-201ENST00000223061 ZNF674Q2M3X9 581 aa10.53□□□□□ -0.72
PCOLCE-201ENST00000223061 ANAPC16Q96DE5 110 aa10.53□□□□□ -0.72
PCOLCE-201ENST00000223061 TRBV24-1A0A075B6N3 115 aa10.53□□□□□ -0.72
PCOLCE-201ENST00000223061 K7EQM0 130 aa10.53□□□□□ -0.72
PCOLCE-201ENST00000223061 ADIRFQ15847 76 aa10.53□□□□□ -0.72
PCOLCE-201ENST00000223061 CST9LP1Q5W188 147 aa10.53□□□□□ -0.72
PCOLCE-201ENST00000223061 TRBV7-9A0A0J9YWB2 115 aa10.52□□□□□ -0.73
PCOLCE-201ENST00000223061 SERTM2A0A1B0GWG4 89 aa10.52□□□□□ -0.73
PCOLCE-201ENST00000223061 SPART-AS1P0CW21 52 aa10.52□□□□□ -0.73
PCOLCE-201ENST00000223061 ATP5G3P48201 142 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms