RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 EDN2P20800 178 aa11.55□□□□□ -0.56
PAF1-201ENST00000221265 UBE2E2Q96LR5 201 aa11.55□□□□□ -0.56
PAF1-201ENST00000221265 U3KQE9 123 aa11.55□□□□□ -0.56
PAF1-201ENST00000221265 HAX1O00165 279 aa11.54□□□□□ -0.56
PAF1-201ENST00000221265 LGALS1P09382 135 aaKnown RBP11.54□□□□□ -0.56
PAF1-201ENST00000221265 DEFB136Q30KP8 78 aa11.54□□□□□ -0.56
PAF1-201ENST00000221265 TM4SF20Q53R12 229 aa11.54□□□□□ -0.56
PAF1-201ENST00000221265 C11orf44Q8N8P7 122 aa11.54□□□□□ -0.56
PAF1-201ENST00000221265 LINC01006Q8NI28 216 aa11.54□□□□□ -0.56
PAF1-201ENST00000221265 SNHG12Q9BXW3 62 aa11.54□□□□□ -0.56
PAF1-201ENST00000221265 SELENOKQ9Y6D0 94 aa11.54□□□□□ -0.56
PAF1-201ENST00000221265 TENM1Q9UKZ4 2725 aa11.54□□□□□ -0.56
PAF1-201ENST00000221265 IGHV4OR15-8A0A075B7B6 117 aa11.53□□□□□ -0.56
PAF1-201ENST00000221265 A0A087WW49 117 aa11.53□□□□□ -0.56
PAF1-201ENST00000221265 HSBP1O75506 76 aa11.53□□□□□ -0.56
PAF1-201ENST00000221265 RPL7P18124 248 aaKnown RBP11.53□□□□□ -0.56
PAF1-201ENST00000221265 RNASEKQ6P5S7 137 aaKnown RBP11.53□□□□□ -0.56
PAF1-201ENST00000221265 C8orf49Q96NF6 230 aa11.53□□□□□ -0.56
PAF1-201ENST00000221265 AAMDCQ9H7C9 122 aa11.53□□□□□ -0.56
PAF1-201ENST00000221265 BORCS7Q96B45 105 aa11.53□□□□□ -0.56
PAF1-201ENST00000221265 MIEN1Q9BRT3 115 aa11.53□□□□□ -0.56
PAF1-201ENST00000221265 MAST4O15021 2626 aa11.53□□□□□ -0.56
PAF1-201ENST00000221265 PSG9Q00887 426 aa11.52□□□□□ -0.57
PAF1-201ENST00000221265 KHDC1LQ5JSQ8 128 aa11.52□□□□□ -0.57
PAF1-201ENST00000221265 IGFL4Q6B9Z1 124 aa11.52□□□□□ -0.57
PAF1-201ENST00000221265 ZNF705AQ6ZN79 300 aaPredicted RBP11.52□□□□□ -0.57
PAF1-201ENST00000221265 LOC102724200A0A096LPH7 203 aaPredicted RBP11.51□□□□□ -0.57
PAF1-201ENST00000221265 M0R2Z0 102 aa11.51□□□□□ -0.57
PAF1-201ENST00000221265 CHEK1O14757 476 aa11.51□□□□□ -0.57
PAF1-201ENST00000221265 M0QZ24 198 aa11.51□□□□□ -0.57
PAF1-201ENST00000221265 ARMS2P0C7Q2 107 aa11.51□□□□□ -0.57
PAF1-201ENST00000221265 RAB4AP20338 218 aa11.51□□□□□ -0.57
PAF1-201ENST00000221265 CTRLP40313 264 aa11.51□□□□□ -0.57
PAF1-201ENST00000221265 CSN1S1P47710 185 aa11.51□□□□□ -0.57
PAF1-201ENST00000221265 EBLN2Q6P2I7 272 aa11.51□□□□□ -0.57
PAF1-201ENST00000221265 DUX3Q96PT4 197 aa11.51□□□□□ -0.57
PAF1-201ENST00000221265 NDFIP1Q9BT67 221 aa11.51□□□□□ -0.57
PAF1-201ENST00000221265 C16orf95Q9H693 158 aa11.51□□□□□ -0.57
PAF1-201ENST00000221265 IGKV2-40A0A087WW87 121 aaPredicted RBP11.5□□□□□ -0.57
PAF1-201ENST00000221265 A0A1B0GUT8 65 aa11.5□□□□□ -0.57
PAF1-201ENST00000221265 M0R143 59 aa11.5□□□□□ -0.57
PAF1-201ENST00000221265 IGKV2D-40P01614 121 aaPredicted RBP11.5□□□□□ -0.57
PAF1-201ENST00000221265 HLA-DMBP28068 263 aa11.5□□□□□ -0.57
PAF1-201ENST00000221265 GPHB5Q86YW7 130 aa11.5□□□□□ -0.57
PAF1-201ENST00000221265 SERTM2A0A1B0GWG4 89 aa11.5□□□□□ -0.57
PAF1-201ENST00000221265 CD28P10747 220 aa11.5□□□□□ -0.57
PAF1-201ENST00000221265 HOXD3P31249 432 aaPredicted RBP11.5□□□□□ -0.57
PAF1-201ENST00000221265 FAM106AQ4KMX7 169 aa11.5□□□□□ -0.57
PAF1-201ENST00000221265 LCN12Q6JVE5 192 aa11.5□□□□□ -0.57
PAF1-201ENST00000221265 GLMPQ8WWB7 406 aa11.5□□□□□ -0.57
PAF1-201ENST00000221265 DAZ1Q9NQZ3 744 aaKnown RBP11.5□□□□□ -0.57
PAF1-201ENST00000221265 CRLF1O75462 422 aa11.49□□□□□ -0.57
PAF1-201ENST00000221265 S100A7P31151 101 aa11.49□□□□□ -0.57
PAF1-201ENST00000221265 SYNJ2BPP57105 145 aa11.49□□□□□ -0.57
PAF1-201ENST00000221265 FAM162BQ5T6X4 162 aa11.49□□□□□ -0.57
PAF1-201ENST00000221265 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.49□□□□□ -0.57
PAF1-201ENST00000221265 SORL1Q92673 2214 aa11.49□□□□□ -0.57
PAF1-201ENST00000221265 ATRQ13535 2644 aa11.49□□□□□ -0.57
PAF1-201ENST00000221265 C2orf70A6NJV1 201 aa11.48□□□□□ -0.57
PAF1-201ENST00000221265 CT45A10P0DMU9 189 aa11.48□□□□□ -0.57
PAF1-201ENST00000221265 RIGQ13278 110 aa11.48□□□□□ -0.57
PAF1-201ENST00000221265 SPATA45Q537H7 98 aa11.48□□□□□ -0.57
PAF1-201ENST00000221265 ARL6IP6Q8N6S5 226 aa11.48□□□□□ -0.57
PAF1-201ENST00000221265 GATD1Q8NB37 220 aa11.48□□□□□ -0.57
PAF1-201ENST00000221265 JMJD8Q96S16 334 aa11.48□□□□□ -0.57
PAF1-201ENST00000221265 IGHV7-4-1A0A0J9YVY3 117 aa11.48□□□□□ -0.57
PAF1-201ENST00000221265 SLURP1P55000 103 aa11.48□□□□□ -0.57
PAF1-201ENST00000221265 PMCHL1Q16048 86 aa11.48□□□□□ -0.57
PAF1-201ENST00000221265 COX8CQ7Z4L0 72 aa11.48□□□□□ -0.57
PAF1-201ENST00000221265 KLHL30-AS1Q8NEE0 82 aa11.48□□□□□ -0.57
PAF1-201ENST00000221265 CHCHD1Q96BP2 118 aaKnown RBP11.48□□□□□ -0.57
PAF1-201ENST00000221265 RHPN1-AS1Q9BWJ2 59 aa11.48□□□□□ -0.57
PAF1-201ENST00000221265 A0A087X0K7 114 aa11.47□□□□□ -0.57
PAF1-201ENST00000221265 A0A1W2PRX2 142 aa11.47□□□□□ -0.57
PAF1-201ENST00000221265 TMEM213A2RRL7 107 aa11.47□□□□□ -0.57
PAF1-201ENST00000221265 TCF21O43680 179 aa11.47□□□□□ -0.57
PAF1-201ENST00000221265 SH2D1AO60880 128 aa11.47□□□□□ -0.57
PAF1-201ENST00000221265 C8orf86Q6ZUL3 223 aa11.47□□□□□ -0.57
PAF1-201ENST00000221265 RNF182Q8N6D2 247 aa11.47□□□□□ -0.57
PAF1-201ENST00000221265 OR11H1Q8NG94 326 aa11.47□□□□□ -0.57
PAF1-201ENST00000221265 C4orf3Q8WVX3 66 aa11.47□□□□□ -0.57
PAF1-201ENST00000221265 PRR25Q96S07 402 aa11.47□□□□□ -0.57
PAF1-201ENST00000221265 CLEC5AQ9NY25 188 aa11.47□□□□□ -0.57
PAF1-201ENST00000221265 BTF3P20290 206 aaKnown RBP11.47□□□□□ -0.57
PAF1-201ENST00000221265 NUTF2P61970 127 aaKnown RBP11.47□□□□□ -0.57
PAF1-201ENST00000221265 ATOH7Q8N100 152 aa11.47□□□□□ -0.57
PAF1-201ENST00000221265 VGLL1Q99990 258 aa11.47□□□□□ -0.57
PAF1-201ENST00000221265 SMPXQ9UHP9 88 aa11.47□□□□□ -0.57
PAF1-201ENST00000221265 TMEM189A5PLL7 270 aa11.46□□□□□ -0.57
PAF1-201ENST00000221265 K7EMT4 169 aa11.46□□□□□ -0.57
PAF1-201ENST00000221265 NDUFA7O95182 113 aa11.46□□□□□ -0.57
PAF1-201ENST00000221265 LINC00614P0C842 121 aa11.46□□□□□ -0.57
PAF1-201ENST00000221265 Q6AWC8 147 aa11.46□□□□□ -0.57
PAF1-201ENST00000221265 SPATA12Q7Z6I5 190 aa11.46□□□□□ -0.57
PAF1-201ENST00000221265 CITED2Q99967 270 aaPredicted RBP11.46□□□□□ -0.57
PAF1-201ENST00000221265 TPPP3Q9BW30 176 aa11.46□□□□□ -0.57
PAF1-201ENST00000221265 VWFP04275 2813 aa11.46□□□□□ -0.58
PAF1-201ENST00000221265 IGKV3-7A0A075B6H7 116 aa11.45□□□□□ -0.58
PAF1-201ENST00000221265 TMSB15BA0A087X1C1 80 aa11.45□□□□□ -0.58
PAF1-201ENST00000221265 TRAV8-2A0A0B4J237 113 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms