RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 EGR2P11161 476 aaPredicted RBP11.91□□□□□ -0.5
UBR5-201ENST00000220959 FAM104BQ5XKR9 115 aa11.91□□□□□ -0.5
UBR5-201ENST00000220959 ZNF492Q9P255 531 aa11.91□□□□□ -0.5
UBR5-201ENST00000220959 NDUFA12Q9UI09 145 aa11.91□□□□□ -0.5
UBR5-201ENST00000220959 NBL1P41271 181 aa11.9□□□□□ -0.5
UBR5-201ENST00000220959 CLPSL1A2RUU4 121 aa11.9□□□□□ -0.5
UBR5-201ENST00000220959 C5orf63A6NC05 138 aa11.9□□□□□ -0.5
UBR5-201ENST00000220959 USF3Q68DE3 2245 aa11.9□□□□□ -0.5
UBR5-201ENST00000220959 PRR30Q53SZ7 412 aaPredicted RBP11.9□□□□□ -0.5
UBR5-201ENST00000220959 NRXN2Q9P2S2 1712 aa11.9□□□□□ -0.5
UBR5-201ENST00000220959 PRRC2AP48634 2157 aaKnown RBP11.9□□□□□ -0.5
UBR5-201ENST00000220959 TSSC4Q9Y5U2 329 aaPredicted RBP11.9□□□□□ -0.51
UBR5-201ENST00000220959 TMEM14BQ9NUH8 114 aa11.89□□□□□ -0.51
UBR5-201ENST00000220959 A0A0G2JRQ6 117 aa11.89□□□□□ -0.51
UBR5-201ENST00000220959 TINCRA0A1B0GVN0 87 aa11.89□□□□□ -0.51
UBR5-201ENST00000220959 TRAV26-2A0A0B4J265 109 aa11.89□□□□□ -0.51
UBR5-201ENST00000220959 B3GALT5-AS1P59052 145 aa11.89□□□□□ -0.51
UBR5-201ENST00000220959 SRSF2Q01130 221 aaKnown RBP11.89□□□□□ -0.51
UBR5-201ENST00000220959 Q6ZS49 121 aa11.89□□□□□ -0.51
UBR5-201ENST00000220959 MRPL51Q4U2R6 128 aaKnown RBP11.89□□□□□ -0.51
UBR5-201ENST00000220959 C17orf82Q86X59 251 aaPredicted RBP11.89□□□□□ -0.51
UBR5-201ENST00000220959 CHKB-CPT1BH3BT56 60 aa11.89□□□□□ -0.51
UBR5-201ENST00000220959 ZNF134P52741 427 aa11.89□□□□□ -0.51
UBR5-201ENST00000220959 CRYGCP07315 174 aa11.89□□□□□ -0.51
UBR5-201ENST00000220959 TEX36Q5VZQ5 186 aa11.89□□□□□ -0.51
UBR5-201ENST00000220959 SPG11Q96JI7 2443 aa11.88□□□□□ -0.51
UBR5-201ENST00000220959 A0A0J9YY99 117 aa11.88□□□□□ -0.51
UBR5-201ENST00000220959 XCL1P47992 114 aa11.88□□□□□ -0.51
UBR5-201ENST00000220959 RPL18AQ02543 176 aaKnown RBP11.88□□□□□ -0.51
UBR5-201ENST00000220959 RHOHQ15669 191 aa11.88□□□□□ -0.51
UBR5-201ENST00000220959 CFHR4Q92496 578 aa11.88□□□□□ -0.51
UBR5-201ENST00000220959 FAM231BA6NCW3 169 aa11.88□□□□□ -0.51
UBR5-201ENST00000220959 NDUFA4L2Q9NRX3 87 aa11.88□□□□□ -0.51
UBR5-201ENST00000220959 TRBV19A0A075B6N1 114 aa11.87□□□□□ -0.51
UBR5-201ENST00000220959 PRO1854Q9UHT4 67 aa11.87□□□□□ -0.51
UBR5-201ENST00000220959 ZNF503Q96F45 646 aa11.87□□□□□ -0.51
UBR5-201ENST00000220959 NOP10Q9NPE3 64 aaKnown RBP11.87□□□□□ -0.51
UBR5-201ENST00000220959 ZNF833PQ6ZTB9 187 aa11.87□□□□□ -0.51
UBR5-201ENST00000220959 OR11H6Q8NGC7 330 aa11.87□□□□□ -0.51
UBR5-201ENST00000220959 MRPL53Q96EL3 112 aaKnown RBP11.87□□□□□ -0.51
UBR5-201ENST00000220959 C4orf48Q5BLP8 95 aa11.86□□□□□ -0.51
UBR5-201ENST00000220959 CCL24O00175 119 aa11.86□□□□□ -0.51
UBR5-201ENST00000220959 C5orf47Q569G3 176 aa11.86□□□□□ -0.51
UBR5-201ENST00000220959 Q6ZRM9 215 aa11.86□□□□□ -0.51
UBR5-201ENST00000220959 ZNF581Q9P0T4 197 aa11.86□□□□□ -0.51
UBR5-201ENST00000220959 ETDCA0A1B0GVM5 59 aa11.86□□□□□ -0.51
UBR5-201ENST00000220959 Q0VG73 95 aa11.86□□□□□ -0.51
UBR5-201ENST00000220959 PPDPFLQ8WWR9 84 aa11.86□□□□□ -0.51
UBR5-201ENST00000220959 PRR25Q96S07 402 aa11.85□□□□□ -0.51
UBR5-201ENST00000220959 REG4Q9BYZ8 158 aa11.85□□□□□ -0.51
UBR5-201ENST00000220959 ELANEP08246 267 aa11.85□□□□□ -0.51
UBR5-201ENST00000220959 IGLV2-23P01705 113 aa11.85□□□□□ -0.51
UBR5-201ENST00000220959 RBM3P98179 157 aaKnown RBP11.85□□□□□ -0.51
UBR5-201ENST00000220959 A0A1B0GUS0 222 aa11.85□□□□□ -0.51
UBR5-201ENST00000220959 RNASE13Q5GAN3 156 aaKnown RBP11.85□□□□□ -0.51
UBR5-201ENST00000220959 RNF144BQ7Z419 303 aa11.85□□□□□ -0.51
UBR5-201ENST00000220959 CUL9Q8IWT3 2517 aa11.84□□□□□ -0.51
UBR5-201ENST00000220959 IGHV7-4-1A0A0J9YVY3 117 aa11.84□□□□□ -0.51
UBR5-201ENST00000220959 Q6ZQT7 251 aa11.84□□□□□ -0.51
UBR5-201ENST00000220959 ZNF664Q8N3J9 261 aa11.84□□□□□ -0.51
UBR5-201ENST00000220959 C9orf66Q5T8R8 295 aa11.84□□□□□ -0.51
UBR5-201ENST00000220959 ANKRD29Q8N6D5 301 aa11.84□□□□□ -0.51
UBR5-201ENST00000220959 C9orf118A6NHY6 69 aa11.84□□□□□ -0.51
UBR5-201ENST00000220959 CCL18P55774 89 aa11.84□□□□□ -0.51
UBR5-201ENST00000220959 QRFPP83859 136 aa11.84□□□□□ -0.51
UBR5-201ENST00000220959 U3KQE9 123 aa11.84□□□□□ -0.51
UBR5-201ENST00000220959 TMEM131Q92545 1883 aa11.83□□□□□ -0.51
UBR5-201ENST00000220959 H3BRN7 92 aa11.83□□□□□ -0.52
UBR5-201ENST00000220959 CEND1Q8N111 149 aa11.83□□□□□ -0.52
UBR5-201ENST00000220959 TIMM17AQ99595 171 aa11.83□□□□□ -0.52
UBR5-201ENST00000220959 SHISA9B4DS77 424 aa11.83□□□□□ -0.52
UBR5-201ENST00000220959 C18orf32Q8TCD1 76 aa11.83□□□□□ -0.52
UBR5-201ENST00000220959 CARD19Q96LW7 228 aa11.83□□□□□ -0.52
UBR5-201ENST00000220959 F8W1H4 67 aa11.83□□□□□ -0.52
UBR5-201ENST00000220959 CFPP27918 469 aa11.83□□□□□ -0.52
UBR5-201ENST00000220959 PRSS57Q6UWY2 283 aa11.83□□□□□ -0.52
UBR5-201ENST00000220959 WDR90Q96KV7 1748 aa11.83□□□□□ -0.52
UBR5-201ENST00000220959 F8VRH5 84 aa11.83□□□□□ -0.52
UBR5-201ENST00000220959 A0A0G2JMZ2 1700 aa11.83□□□□□ -0.52
UBR5-201ENST00000220959 LRRC37A2A6NM11 1700 aa11.83□□□□□ -0.52
UBR5-201ENST00000220959 COL4A1P02462 1669 aa11.83□□□□□ -0.52
UBR5-201ENST00000220959 FRMPD3Q5JV73 1810 aa11.82□□□□□ -0.52
UBR5-201ENST00000220959 FUSP35637 526 aaKnown RBP eCLIP11.82□□□□□ -0.521e-5■■■□□ 17
UBR5-201ENST00000220959 LGALS9BQ3B8N2 356 aa11.82□□□□□ -0.52
UBR5-201ENST00000220959 LGALS9CQ6DKI2 356 aa11.82□□□□□ -0.52
UBR5-201ENST00000220959 Q8TCH9 128 aa11.82□□□□□ -0.52
UBR5-201ENST00000220959 VOPP1Q96AW1 172 aa11.82□□□□□ -0.52
UBR5-201ENST00000220959 KLHDC3Q9BQ90 382 aa11.82□□□□□ -0.52
UBR5-201ENST00000220959 SVIPQ8NHG7 77 aa11.82□□□□□ -0.52
UBR5-201ENST00000220959 OBSL1O75147 1896 aa11.82□□□□□ -0.52
UBR5-201ENST00000220959 LYL1P12980 280 aa11.82□□□□□ -0.52
UBR5-201ENST00000220959 TICRRQ7Z2Z1 1910 aa11.81□□□□□ -0.52
UBR5-201ENST00000220959 IGHV4-4A0A075B6R2 117 aa11.81□□□□□ -0.52
UBR5-201ENST00000220959 PYY3Q5JQD4 70 aa11.81□□□□□ -0.52
UBR5-201ENST00000220959 HELZP42694 1942 aaKnown RBP11.81□□□□□ -0.52
UBR5-201ENST00000220959 LMO1P25800 156 aa11.81□□□□□ -0.52
UBR5-201ENST00000220959 FOXI2Q6ZQN5 318 aa11.81□□□□□ -0.52
UBR5-201ENST00000220959 PYGO2Q9BRQ0 406 aa11.81□□□□□ -0.52
UBR5-201ENST00000220959 NDUFB1O75438 58 aa11.81□□□□□ -0.52
UBR5-201ENST00000220959 C17orf58Q2M2W7 97 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms