RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 NHLRC4P0CG21 123 aaPredicted RBP9.61□□□□□ -0.87
TIMP1-201ENST00000218388 CEBPGP53567 150 aa9.61□□□□□ -0.87
TIMP1-201ENST00000218388 SMUG1Q53HV7 270 aa9.61□□□□□ -0.87
TIMP1-201ENST00000218388 GFI1BQ5VTD9 330 aa9.61□□□□□ -0.87
TIMP1-201ENST00000218388 ZFAND2AQ8N6M9 145 aa9.61□□□□□ -0.87
TIMP1-201ENST00000218388 RNF183Q96D59 192 aa9.61□□□□□ -0.87
TIMP1-201ENST00000218388 TM2D3Q9BRN9 247 aa9.61□□□□□ -0.87
TIMP1-201ENST00000218388 RNASE4P34096 147 aaKnown RBP9.6□□□□□ -0.87
TIMP1-201ENST00000218388 GNG4P50150 75 aa9.6□□□□□ -0.87
TIMP1-201ENST00000218388 BAGE2Q86Y30 109 aa9.6□□□□□ -0.87
TIMP1-201ENST00000218388 TMEM183AQ8IXX5 376 aa9.6□□□□□ -0.87
TIMP1-201ENST00000218388 CSNK1G2-AS1Q8NCQ2 148 aa9.6□□□□□ -0.87
TIMP1-201ENST00000218388 SMIM12Q96EX1 92 aa9.6□□□□□ -0.87
TIMP1-201ENST00000218388 MEGF8Q7Z7M0 2845 aa9.6□□□□□ -0.87
TIMP1-201ENST00000218388 IGHV3OR16-12A0A075B7B8 117 aa9.59□□□□□ -0.87
TIMP1-201ENST00000218388 TRAV12-3A0A0B4J271 114 aa9.59□□□□□ -0.87
TIMP1-201ENST00000218388 TRAV21A0A0B4J279 112 aa9.59□□□□□ -0.87
TIMP1-201ENST00000218388 H7BYZ3 331 aa9.59□□□□□ -0.87
TIMP1-201ENST00000218388 GCGP01275 180 aa9.59□□□□□ -0.87
TIMP1-201ENST00000218388 SRP19P09132 144 aaKnown RBP9.59□□□□□ -0.87
TIMP1-201ENST00000218388 BTN1A1Q13410 526 aa9.59□□□□□ -0.87
TIMP1-201ENST00000218388 ZNF674Q2M3X9 581 aa9.59□□□□□ -0.87
TIMP1-201ENST00000218388 CENPWQ5EE01 88 aa9.59□□□□□ -0.87
TIMP1-201ENST00000218388 Q6AWC8 147 aa9.59□□□□□ -0.87
TIMP1-201ENST00000218388 TVP23CQ96ET8 276 aa9.59□□□□□ -0.87
TIMP1-201ENST00000218388 C8orf49Q96NF6 230 aa9.59□□□□□ -0.87
TIMP1-201ENST00000218388 LINC01587Q99440 93 aa9.59□□□□□ -0.87
TIMP1-201ENST00000218388 DERL1Q9BUN8 251 aa9.59□□□□□ -0.87
TIMP1-201ENST00000218388 PARLQ9H300 379 aa9.59□□□□□ -0.87
TIMP1-201ENST00000218388 C9JCJ5 164 aa9.58□□□□□ -0.88
TIMP1-201ENST00000218388 KIR3DS1Q14943 382 aa9.58□□□□□ -0.88
TIMP1-201ENST00000218388 UQCC3Q6UW78 93 aa9.58□□□□□ -0.88
TIMP1-201ENST00000218388 ZNF705AQ6ZN79 300 aaPredicted RBP9.58□□□□□ -0.88
TIMP1-201ENST00000218388 COX8CQ7Z4L0 72 aa9.58□□□□□ -0.88
TIMP1-201ENST00000218388 C1orf158Q8N1D5 194 aa9.58□□□□□ -0.88
TIMP1-201ENST00000218388 OR11H2Q8NH07 326 aa9.58□□□□□ -0.88
TIMP1-201ENST00000218388 OVOL2Q9BRP0 275 aa9.58□□□□□ -0.88
TIMP1-201ENST00000218388 PYGO2Q9BRQ0 406 aa9.58□□□□□ -0.88
TIMP1-201ENST00000218388 BIN3Q9NQY0 253 aa9.58□□□□□ -0.88
TIMP1-201ENST00000218388 SMIM9A6NGZ8 99 aa9.57□□□□□ -0.88
TIMP1-201ENST00000218388 PFN1P07737 140 aaKnown RBP9.57□□□□□ -0.88
TIMP1-201ENST00000218388 SRSF3P84103 164 aaKnown RBP9.57□□□□□ -0.88
TIMP1-201ENST00000218388 FAM74A3Q4VXF1 159 aa9.57□□□□□ -0.88
TIMP1-201ENST00000218388 PRR9Q5T870 116 aa9.57□□□□□ -0.88
TIMP1-201ENST00000218388 COMMD7Q86VX2 200 aa9.57□□□□□ -0.88
TIMP1-201ENST00000218388 NEU1Q99519 415 aa9.57□□□□□ -0.88
TIMP1-201ENST00000218388 SMIM7Q9BQ49 75 aa9.57□□□□□ -0.88
TIMP1-201ENST00000218388 RETNQ9HD89 108 aa9.57□□□□□ -0.88
TIMP1-201ENST00000218388 LINC00862A6NCI5 91 aa9.56□□□□□ -0.88
TIMP1-201ENST00000218388 FABP5P3A8MUU1 101 aa9.56□□□□□ -0.88
TIMP1-201ENST00000218388 ZNF727A8MUV8 499 aa9.56□□□□□ -0.88
TIMP1-201ENST00000218388 ZNF324O75467 553 aaPredicted RBP9.56□□□□□ -0.88
TIMP1-201ENST00000218388 RBMY1A1P0DJD3 496 aaKnown RBP9.56□□□□□ -0.88
TIMP1-201ENST00000218388 RBMY1CP0DJD4 496 aa9.56□□□□□ -0.88
TIMP1-201ENST00000218388 MGST1P10620 155 aaKnown RBP9.56□□□□□ -0.88
TIMP1-201ENST00000218388 MIFP14174 115 aa9.56□□□□□ -0.88
TIMP1-201ENST00000218388 RBMY1FQ15415 496 aaKnown RBP9.56□□□□□ -0.88
TIMP1-201ENST00000218388 RRN3P1Q2M238 152 aa9.56□□□□□ -0.88
TIMP1-201ENST00000218388 SOHLH1Q5JUK2 328 aa9.56□□□□□ -0.88
TIMP1-201ENST00000218388 FAM162BQ5T6X4 162 aa9.56□□□□□ -0.88
TIMP1-201ENST00000218388 NHLRC2Q8NBF2 726 aa9.56□□□□□ -0.88
TIMP1-201ENST00000218388 ZC2HC1AQ96GY0 325 aa9.56□□□□□ -0.88
TIMP1-201ENST00000218388 MLST8Q9BVC4 326 aa9.56□□□□□ -0.88
TIMP1-201ENST00000218388 FAM159AQ6UWV7 190 aa9.55□□□□□ -0.88
TIMP1-201ENST00000218388 LINC00467Q9BRT7 94 aa9.55□□□□□ -0.88
TIMP1-201ENST00000218388 LY96Q9Y6Y9 160 aa9.55□□□□□ -0.88
TIMP1-201ENST00000218388 TRBV20OR9-2A0A075B6H5 130 aa9.54□□□□□ -0.88
TIMP1-201ENST00000218388 IGHV1OR15-1A0A075B7D0 117 aa9.54□□□□□ -0.88
TIMP1-201ENST00000218388 C9JQL5 133 aa9.54□□□□□ -0.88
TIMP1-201ENST00000218388 HTN1P15515 57 aa9.54□□□□□ -0.88
TIMP1-201ENST00000218388 ZNF80P51504 273 aaPredicted RBP9.54□□□□□ -0.88
TIMP1-201ENST00000218388 PRR27Q6MZM9 219 aa9.54□□□□□ -0.88
TIMP1-201ENST00000218388 EIF4E3Q8N5X7 224 aaKnown RBP9.54□□□□□ -0.88
TIMP1-201ENST00000218388 DAZAP1Q96EP5 407 aaKnown RBP9.54□□□□□ -0.88
TIMP1-201ENST00000218388 KCNS1Q96KK3 526 aa9.54□□□□□ -0.88
TIMP1-201ENST00000218388 NAGKQ9UJ70 344 aa9.54□□□□□ -0.88
TIMP1-201ENST00000218388 X6R8D5 127 aa9.54□□□□□ -0.88
TIMP1-201ENST00000218388 TMEM189A5PLL7 270 aa9.53□□□□□ -0.88
TIMP1-201ENST00000218388 CBY3A6NI87 242 aa9.53□□□□□ -0.88
TIMP1-201ENST00000218388 ZNF705GA8MUZ8 300 aaPredicted RBP9.53□□□□□ -0.88
TIMP1-201ENST00000218388 SH2D1AO60880 128 aa9.53□□□□□ -0.88
TIMP1-201ENST00000218388 SFTA3P0C7M3 94 aa9.53□□□□□ -0.88
TIMP1-201ENST00000218388 ZNF493Q6ZR52 646 aa9.53□□□□□ -0.88
TIMP1-201ENST00000218388 C16orf74Q96GX8 76 aa9.53□□□□□ -0.88
TIMP1-201ENST00000218388 SDF2L1Q9HCN8 221 aa9.53□□□□□ -0.88
TIMP1-201ENST00000218388 TRGV11A0A075B6L2 103 aa9.52□□□□□ -0.89
TIMP1-201ENST00000218388 PGPEP1LA6NFU8 196 aa9.52□□□□□ -0.89
TIMP1-201ENST00000218388 IGLV2-8P01709 118 aa9.52□□□□□ -0.89
TIMP1-201ENST00000218388 TMEM241Q24JQ0 296 aa9.52□□□□□ -0.89
TIMP1-201ENST00000218388 TDRG1Q3Y452 100 aa9.52□□□□□ -0.89
TIMP1-201ENST00000218388 ANXA2RQ3ZCQ2 193 aa9.52□□□□□ -0.89
TIMP1-201ENST00000218388 MUC21Q5SSG8 566 aa9.52□□□□□ -0.89
TIMP1-201ENST00000218388 TMEM263Q8WUH6 116 aaKnown RBP9.52□□□□□ -0.89
TIMP1-201ENST00000218388 NAT8Q9UHE5 227 aa9.52□□□□□ -0.89
TIMP1-201ENST00000218388 U3KQK5 164 aa9.52□□□□□ -0.89
TIMP1-201ENST00000218388 IGHV4-28A0A0C4DH34 117 aa9.51□□□□□ -0.89
TIMP1-201ENST00000218388 ORM1P02763 201 aa9.51□□□□□ -0.89
TIMP1-201ENST00000218388 CRIP1P50238 77 aa9.51□□□□□ -0.89
TIMP1-201ENST00000218388 Q8NAQ8 132 aa9.51□□□□□ -0.89
TIMP1-201ENST00000218388 OCC1Q8TAD7 63 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms