RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 ATP5LO75964 103 aa10.22□□□□□ -0.77
SRP54-201ENST00000216774 EVI2AP22794 236 aa10.22□□□□□ -0.77
SRP54-201ENST00000216774 KIR3DS1Q14943 382 aa10.22□□□□□ -0.77
SRP54-201ENST00000216774 C8orf86Q6ZUL3 223 aa10.22□□□□□ -0.77
SRP54-201ENST00000216774 OR2K2Q8NGT1 345 aa10.22□□□□□ -0.77
SRP54-201ENST00000216774 HHLA3Q9XRX5 114 aa10.22□□□□□ -0.77
SRP54-201ENST00000216774 SPTBN2O15020 2390 aa10.22□□□□□ -0.77
SRP54-201ENST00000216774 IGHV4-4A0A075B6R2 117 aa10.22□□□□□ -0.77
SRP54-201ENST00000216774 CENPVL3A0A0U1RRI6 287 aa10.22□□□□□ -0.77
SRP54-201ENST00000216774 G3V318 75 aa10.22□□□□□ -0.77
SRP54-201ENST00000216774 PPIFP30405 207 aaKnown RBP10.22□□□□□ -0.77
SRP54-201ENST00000216774 C21orf62-AS1Q17RA5 79 aa10.22□□□□□ -0.77
SRP54-201ENST00000216774 HIGD1BQ9P298 99 aa10.22□□□□□ -0.77
SRP54-201ENST00000216774 IGHV7-4-1A0A0J9YVY3 117 aa10.21□□□□□ -0.77
SRP54-201ENST00000216774 PRSS1P07477 247 aa10.21□□□□□ -0.77
SRP54-201ENST00000216774 TCTAP57738 103 aa10.21□□□□□ -0.77
SRP54-201ENST00000216774 TMEM158Q8WZ71 300 aa10.21□□□□□ -0.77
SRP54-201ENST00000216774 A0A0G2JLM5 398 aa10.21□□□□□ -0.78
SRP54-201ENST00000216774 IGKCP01834 107 aa10.21□□□□□ -0.78
SRP54-201ENST00000216774 EFNA4P52798 201 aa10.21□□□□□ -0.78
SRP54-201ENST00000216774 RNF151Q2KHN1 245 aa10.21□□□□□ -0.78
SRP54-201ENST00000216774 A0A1W2PPR1 153 aa10.2□□□□□ -0.78
SRP54-201ENST00000216774 DPM2O94777 84 aa10.2□□□□□ -0.78
SRP54-201ENST00000216774 TRGV3P03979 118 aa10.2□□□□□ -0.78
SRP54-201ENST00000216774 HLA-DRB4P13762 266 aa10.2□□□□□ -0.78
SRP54-201ENST00000216774 GATA1P15976 413 aaPredicted RBP10.2□□□□□ -0.78
SRP54-201ENST00000216774 ATP5G2Q06055 141 aa10.2□□□□□ -0.78
SRP54-201ENST00000216774 C5orf56Q8N8D9 126 aa10.2□□□□□ -0.78
SRP54-201ENST00000216774 NRACQ8N912 160 aa10.2□□□□□ -0.78
SRP54-201ENST00000216774 HLA-DRB4X5D2U9 266 aa10.2□□□□□ -0.78
SRP54-201ENST00000216774 SPTA1P02549 2419 aa10.2□□□□□ -0.78
SRP54-201ENST00000216774 LINC01548A6NM66 108 aa10.19□□□□□ -0.78
SRP54-201ENST00000216774 H3BUT2 72 aa10.19□□□□□ -0.78
SRP54-201ENST00000216774 K7EP34 96 aa10.19□□□□□ -0.78
SRP54-201ENST00000216774 K7ERU9 68 aa10.19□□□□□ -0.78
SRP54-201ENST00000216774 NPFFO15130 113 aa10.19□□□□□ -0.78
SRP54-201ENST00000216774 PTPRZ1P23471 2315 aaPredicted RBP10.19□□□□□ -0.78
SRP54-201ENST00000216774 JMJD8Q96S16 334 aa10.19□□□□□ -0.78
SRP54-201ENST00000216774 LENEPQ9Y5L5 61 aa10.19□□□□□ -0.78
SRP54-201ENST00000216774 IGHV3OR16-13A0A075B7E8 117 aa10.19□□□□□ -0.78
SRP54-201ENST00000216774 IGHV3-74A0A0B4J1X5 117 aa10.19□□□□□ -0.78
SRP54-201ENST00000216774 FAM223BA6NKX1 122 aa10.19□□□□□ -0.78
SRP54-201ENST00000216774 SMIM17P0DL12 118 aa10.19□□□□□ -0.78
SRP54-201ENST00000216774 LMO4P61968 165 aa10.19□□□□□ -0.78
SRP54-201ENST00000216774 LAGE3Q14657 143 aa10.19□□□□□ -0.78
SRP54-201ENST00000216774 FAM223AQ8IWN6 122 aa10.19□□□□□ -0.78
SRP54-201ENST00000216774 FOXC2Q99958 501 aa10.19□□□□□ -0.78
SRP54-201ENST00000216774 RAXQ9Y2V3 346 aa10.18□□□□□ -0.78
SRP54-201ENST00000216774 IGKV2D-26A0A0A0MRZ7 120 aa10.18□□□□□ -0.78
SRP54-201ENST00000216774 SPANXN1Q5VSR9 72 aa10.18□□□□□ -0.78
SRP54-201ENST00000216774 C9orf139Q6ZV77 190 aa10.18□□□□□ -0.78
SRP54-201ENST00000216774 MRAP2Q96G30 205 aa10.18□□□□□ -0.78
SRP54-201ENST00000216774 IGHV3-49A0A0A0MS15 119 aa10.17□□□□□ -0.78
SRP54-201ENST00000216774 TMEM8BA6NDV4 472 aa10.17□□□□□ -0.78
SRP54-201ENST00000216774 ZNF207O43670 478 aaKnown RBP10.17□□□□□ -0.78
SRP54-201ENST00000216774 C19orf54Q5BKX5 351 aa10.17□□□□□ -0.78
SRP54-201ENST00000216774 MYOZ3Q8TDC0 251 aa10.17□□□□□ -0.78
SRP54-201ENST00000216774 C16orf92Q96LL3 132 aa10.17□□□□□ -0.78
SRP54-201ENST00000216774 UBTD1Q9HAC8 227 aa10.17□□□□□ -0.78
SRP54-201ENST00000216774 UFC1Q9Y3C8 167 aa10.17□□□□□ -0.78
SRP54-201ENST00000216774 RELNP78509 3460 aa10.17□□□□□ -0.78
SRP54-201ENST00000216774 CSMD1Q96PZ7 3565 aa10.17□□□□□ -0.78
SRP54-201ENST00000216774 A0A1W2PPM0 123 aa10.17□□□□□ -0.78
SRP54-201ENST00000216774 CRIP2P52943 208 aaPredicted RBP10.17□□□□□ -0.78
SRP54-201ENST00000216774 OR5A1Q8NGJ0 315 aa10.17□□□□□ -0.78
SRP54-201ENST00000216774 GLMPQ8WWB7 406 aa10.17□□□□□ -0.78
SRP54-201ENST00000216774 ITLN2Q8WWU7 325 aaPredicted RBP10.17□□□□□ -0.78
SRP54-201ENST00000216774 VPS25Q9BRG1 176 aa10.17□□□□□ -0.78
SRP54-201ENST00000216774 MOB4Q9Y3A3 225 aa10.17□□□□□ -0.78
SRP54-201ENST00000216774 TRAV41A0A0B4J266 112 aa10.16□□□□□ -0.78
SRP54-201ENST00000216774 SRSF1Q07955 248 aaKnown RBP eCLIP10.16□□□□□ -0.78
SRP54-201ENST00000216774 CHAC1Q9BUX1 264 aa10.16□□□□□ -0.78
SRP54-201ENST00000216774 BPESC1Q9GZL8 116 aa10.16□□□□□ -0.78
SRP54-201ENST00000216774 SMIM13P0DJ93 91 aa10.16□□□□□ -0.78
SRP54-201ENST00000216774 ZC2HC1BQ5TFG8 222 aa10.16□□□□□ -0.78
SRP54-201ENST00000216774 WNK2Q9Y3S1 2297 aa10.15□□□□□ -0.78
SRP54-201ENST00000216774 TRBV25-1A0A075B6N4 114 aa10.15□□□□□ -0.78
SRP54-201ENST00000216774 TRAV26-2A0A0B4J265 109 aa10.15□□□□□ -0.78
SRP54-201ENST00000216774 PLNP26678 52 aa10.15□□□□□ -0.78
SRP54-201ENST00000216774 RAB37Q96AX2 223 aa10.15□□□□□ -0.78
SRP54-201ENST00000216774 LINC00477Q96M19 166 aa10.15□□□□□ -0.78
SRP54-201ENST00000216774 A0A087WX48 190 aa10.14□□□□□ -0.79
SRP54-201ENST00000216774 GCSHP23434 173 aa10.14□□□□□ -0.79
SRP54-201ENST00000216774 GTSCR1Q86UQ5 136 aa10.14□□□□□ -0.79
SRP54-201ENST00000216774 H3BVH4 76 aa10.14□□□□□ -0.79
SRP54-201ENST00000216774 FABP2P12104 132 aa10.14□□□□□ -0.79
SRP54-201ENST00000216774 ARL3P36405 182 aa10.14□□□□□ -0.79
SRP54-201ENST00000216774 PRR9Q5T870 116 aa10.14□□□□□ -0.79
SRP54-201ENST00000216774 SMIM2Q9BVW6 85 aa10.14□□□□□ -0.79
SRP54-201ENST00000216774 TM2D2Q9BX73 214 aa10.14□□□□□ -0.79
SRP54-201ENST00000216774 TMEM160Q9NX00 188 aa10.14□□□□□ -0.79
SRP54-201ENST00000216774 MRPL35Q9NZE8 188 aaKnown RBP10.14□□□□□ -0.79
SRP54-201ENST00000216774 TRAV40A0A0B4J280 105 aa10.13□□□□□ -0.79
SRP54-201ENST00000216774 Q6ZQT7 251 aa10.13□□□□□ -0.79
SRP54-201ENST00000216774 TMEM219Q86XT9 240 aa10.13□□□□□ -0.79
SRP54-201ENST00000216774 C20orf173Q96LM9 149 aa10.13□□□□□ -0.79
SRP54-201ENST00000216774 NAA38Q9BRA0 125 aaKnown RBP10.13□□□□□ -0.79
SRP54-201ENST00000216774 SPCS1Q9Y6A9 102 aa10.13□□□□□ -0.79
SRP54-201ENST00000216774 TRAV12-1A0A0B4J245 112 aa10.13□□□□□ -0.79
SRP54-201ENST00000216774 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms