RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 GCSHP23434 173 aa11.71□□□□□ -0.53
EFNB1-201ENST00000204961 LY6LH3BQJ8 138 aa11.71□□□□□ -0.54
EFNB1-201ENST00000204961 TMEM97Q5BJF2 176 aa11.71□□□□□ -0.54
EFNB1-201ENST00000204961 PVRIGQ6DKI7 326 aa11.71□□□□□ -0.54
EFNB1-201ENST00000204961 NF1P21359 2839 aa11.71□□□□□ -0.54
EFNB1-201ENST00000204961 RPL7P18124 248 aaKnown RBP11.7□□□□□ -0.54
EFNB1-201ENST00000204961 HIST1H1AQ02539 215 aaPredicted RBP11.7□□□□□ -0.54
EFNB1-201ENST00000204961 ZNF562Q6V9R5 426 aa11.7□□□□□ -0.54
EFNB1-201ENST00000204961 CLUHP3Q96NS8 147 aa11.7□□□□□ -0.54
EFNB1-201ENST00000204961 IGLV11-55A0A075B6I3 123 aa11.7□□□□□ -0.54
EFNB1-201ENST00000204961 FAM104BQ5XKR9 115 aa11.7□□□□□ -0.54
EFNB1-201ENST00000204961 MAPK1IP1LQ8NDC0 245 aa11.7□□□□□ -0.54
EFNB1-201ENST00000204961 CD5LO43866 347 aa11.7□□□□□ -0.54
EFNB1-201ENST00000204961 TRBV12-3P01733 135 aa11.7□□□□□ -0.54
EFNB1-201ENST00000204961 PPBPP02775 128 aa11.7□□□□□ -0.54
EFNB1-201ENST00000204961 PRTN3P24158 256 aa11.7□□□□□ -0.54
EFNB1-201ENST00000204961 NEGR1Q7Z3B1 354 aa11.7□□□□□ -0.54
EFNB1-201ENST00000204961 TNFRSF14Q92956 283 aa11.7□□□□□ -0.54
EFNB1-201ENST00000204961 JMJD8Q96S16 334 aa11.7□□□□□ -0.54
EFNB1-201ENST00000204961 FOXC2Q99958 501 aa11.7□□□□□ -0.54
EFNB1-201ENST00000204961 H3BVH4 76 aa11.69□□□□□ -0.54
EFNB1-201ENST00000204961 PLP1P60201 277 aa11.69□□□□□ -0.54
EFNB1-201ENST00000204961 PRRC2AP48634 2157 aaKnown RBP11.69□□□□□ -0.54
EFNB1-201ENST00000204961 A0A096LNJ9 63 aa11.69□□□□□ -0.54
EFNB1-201ENST00000204961 K7ERJ3 54 aa11.69□□□□□ -0.54
EFNB1-201ENST00000204961 EFNA4P52798 201 aa11.69□□□□□ -0.54
EFNB1-201ENST00000204961 EMP1P54849 157 aa11.69□□□□□ -0.54
EFNB1-201ENST00000204961 IFI27L1Q96BM0 104 aa11.69□□□□□ -0.54
EFNB1-201ENST00000204961 C16orf54Q6UWD8 224 aa11.68□□□□□ -0.54
EFNB1-201ENST00000204961 NRGNQ92686 78 aa11.68□□□□□ -0.54
EFNB1-201ENST00000204961 SPANXN1Q5VSR9 72 aa11.68□□□□□ -0.54
EFNB1-201ENST00000204961 TMEM14CQ9P0S9 112 aa11.68□□□□□ -0.54
EFNB1-201ENST00000204961 HTN1P15515 57 aa11.68□□□□□ -0.54
EFNB1-201ENST00000204961 OR1N2Q8NGR9 330 aa11.68□□□□□ -0.54
EFNB1-201ENST00000204961 NPIPB6E9PJ23 425 aa11.67□□□□□ -0.54
EFNB1-201ENST00000204961 MGPP08493 103 aa11.67□□□□□ -0.54
EFNB1-201ENST00000204961 HOXB4P17483 251 aaPredicted RBP11.67□□□□□ -0.54
EFNB1-201ENST00000204961 PET117Q6UWS5 81 aa11.67□□□□□ -0.54
EFNB1-201ENST00000204961 C2orf91Q6ZV80 131 aa11.67□□□□□ -0.54
EFNB1-201ENST00000204961 C16orf92Q96LL3 132 aa11.67□□□□□ -0.54
EFNB1-201ENST00000204961 COL25A1Q9BXS0 654 aaPredicted RBP11.67□□□□□ -0.54
EFNB1-201ENST00000204961 C11orf21Q9P2W6 132 aa11.67□□□□□ -0.54
EFNB1-201ENST00000204961 NDUFA3O95167 84 aa11.67□□□□□ -0.54
EFNB1-201ENST00000204961 CT83Q5H943 113 aa11.67□□□□□ -0.54
EFNB1-201ENST00000204961 C8orf31Q8N9H6 132 aa11.67□□□□□ -0.54
EFNB1-201ENST00000204961 MSRB2Q9Y3D2 182 aa11.67□□□□□ -0.54
EFNB1-201ENST00000204961 FN1P02751 2386 aaKnown RBP11.67□□□□□ -0.54
EFNB1-201ENST00000204961 MRPS12O15235 138 aaKnown RBP11.66□□□□□ -0.54
EFNB1-201ENST00000204961 IGF2-ASQ6U949 168 aa11.66□□□□□ -0.54
EFNB1-201ENST00000204961 PIP4P2Q8N4L2 257 aa11.66□□□□□ -0.54
EFNB1-201ENST00000204961 GFRA4Q9GZZ7 299 aa11.66□□□□□ -0.54
EFNB1-201ENST00000204961 AGPAT4-IT1Q9H0P7 198 aa11.66□□□□□ -0.54
EFNB1-201ENST00000204961 WI2-2373I1.2A0A1W2PRP0 233 aa11.66□□□□□ -0.54
EFNB1-201ENST00000204961 S100A4P26447 101 aaKnown RBP11.66□□□□□ -0.54
EFNB1-201ENST00000204961 Q8N9W7 124 aa11.66□□□□□ -0.54
EFNB1-201ENST00000204961 TMEM158Q8WZ71 300 aa11.66□□□□□ -0.54
EFNB1-201ENST00000204961 IGKV2D-26A0A0A0MRZ7 120 aa11.65□□□□□ -0.54
EFNB1-201ENST00000204961 TRAV40A0A0B4J280 105 aa11.65□□□□□ -0.54
EFNB1-201ENST00000204961 EDN2P20800 178 aa11.65□□□□□ -0.54
EFNB1-201ENST00000204961 TMEM95Q3KNT9 176 aa11.65□□□□□ -0.54
EFNB1-201ENST00000204961 A0A0G2JLM5 398 aa11.65□□□□□ -0.54
EFNB1-201ENST00000204961 C19orf84I3L1E1 186 aa11.65□□□□□ -0.54
EFNB1-201ENST00000204961 IGHG4P01861 327 aa11.65□□□□□ -0.54
EFNB1-201ENST00000204961 HBDP02042 147 aa11.65□□□□□ -0.54
EFNB1-201ENST00000204961 COX8AP10176 69 aa11.65□□□□□ -0.54
EFNB1-201ENST00000204961 GTF2H5Q6ZYL4 71 aa11.65□□□□□ -0.54
EFNB1-201ENST00000204961 TEX15Q9BXT5 2789 aa11.65□□□□□ -0.54
EFNB1-201ENST00000204961 FABP5P3A8MUU1 101 aa11.65□□□□□ -0.55
EFNB1-201ENST00000204961 PF4V1P10720 104 aa11.65□□□□□ -0.55
EFNB1-201ENST00000204961 SPCS1Q9Y6A9 102 aa11.65□□□□□ -0.55
EFNB1-201ENST00000204961 TMEM78Q5T7P6 136 aa11.64□□□□□ -0.55
EFNB1-201ENST00000204961 OR2K2Q8NGT1 345 aa11.64□□□□□ -0.55
EFNB1-201ENST00000204961 TNFRSF6BO95407 300 aa11.64□□□□□ -0.55
EFNB1-201ENST00000204961 OR11H6Q8NGC7 330 aa11.64□□□□□ -0.55
EFNB1-201ENST00000204961 IGSF10Q6WRI0 2623 aa11.64□□□□□ -0.55
EFNB1-201ENST00000204961 OVOL3O00110 214 aa11.63□□□□□ -0.55
EFNB1-201ENST00000204961 CRXO43186 299 aaPredicted RBP11.63□□□□□ -0.55
EFNB1-201ENST00000204961 LINC01545Q5VT33 79 aa11.63□□□□□ -0.55
EFNB1-201ENST00000204961 UNQ9165/PRO28630Q6UXU0 137 aa11.63□□□□□ -0.55
EFNB1-201ENST00000204961 Q6ZS46 218 aa11.63□□□□□ -0.55
EFNB1-201ENST00000204961 DTX2Q86UW9 622 aa11.63□□□□□ -0.55
EFNB1-201ENST00000204961 CCDC144NLQ6NUI1 221 aa11.63□□□□□ -0.55
EFNB1-201ENST00000204961 GTSF1LQ9H1H1 148 aa11.63□□□□□ -0.55
EFNB1-201ENST00000204961 MAP1LC3AQ9H492 121 aa11.63□□□□□ -0.55
EFNB1-201ENST00000204961 A1L4Q6 167 aa11.63□□□□□ -0.55
EFNB1-201ENST00000204961 SMIM12Q96EX1 92 aa11.63□□□□□ -0.55
EFNB1-201ENST00000204961 ZC2HC1BQ5TFG8 222 aa11.62□□□□□ -0.55
EFNB1-201ENST00000204961 C14orf178Q8N769 122 aaPredicted RBP11.62□□□□□ -0.55
EFNB1-201ENST00000204961 IGKV3D-20A0A0C4DH25 116 aa11.62□□□□□ -0.55
EFNB1-201ENST00000204961 BMI1P35226 326 aa11.62□□□□□ -0.55
EFNB1-201ENST00000204961 LY6G5BQ8NDX9 201 aa11.62□□□□□ -0.55
EFNB1-201ENST00000204961 CCDC140Q96MF4 163 aa11.62□□□□□ -0.55
EFNB1-201ENST00000204961 DUX5Q96PT3 197 aa11.62□□□□□ -0.55
EFNB1-201ENST00000204961 MXRA5Q9NR99 2828 aa11.62□□□□□ -0.55
EFNB1-201ENST00000204961 A6NDN8 102 aa11.62□□□□□ -0.55
EFNB1-201ENST00000204961 BLCAPP62952 87 aa11.62□□□□□ -0.55
EFNB1-201ENST00000204961 RNASE4P34096 147 aaKnown RBP11.61□□□□□ -0.55
EFNB1-201ENST00000204961 ARL3P36405 182 aa11.61□□□□□ -0.55
EFNB1-201ENST00000204961 SMAGPQ0VAQ4 97 aa11.61□□□□□ -0.55
EFNB1-201ENST00000204961 MS4A6AQ9H2W1 248 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms