RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 GAS8-AS1O95177 125 aa13.41□□□□□ -0.26
PTPN18-201ENST00000175756 ZNF562Q6V9R5 426 aa13.41□□□□□ -0.26
PTPN18-201ENST00000175756 TTC9CQ8N5M4 171 aa13.41□□□□□ -0.26
PTPN18-201ENST00000175756 OR11H12B2RN74 326 aa13.4□□□□□ -0.26
PTPN18-201ENST00000175756 HTN1P15515 57 aa13.4□□□□□ -0.26
PTPN18-201ENST00000175756 LY6EQ16553 131 aa13.4□□□□□ -0.26
PTPN18-201ENST00000175756 OR11H1Q8NG94 326 aa13.4□□□□□ -0.26
PTPN18-201ENST00000175756 OR11H2Q8NH07 326 aa13.4□□□□□ -0.26
PTPN18-201ENST00000175756 SCGB3A1Q96QR1 104 aa13.4□□□□□ -0.26
PTPN18-201ENST00000175756 VKORC1Q9BQB6 163 aa13.4□□□□□ -0.26
PTPN18-201ENST00000175756 NPIPB6E9PJ23 425 aa13.4□□□□□ -0.26
PTPN18-201ENST00000175756 SRD5A1P18405 259 aa13.4□□□□□ -0.26
PTPN18-201ENST00000175756 EMP1P54849 157 aa13.4□□□□□ -0.26
PTPN18-201ENST00000175756 AMTNQ6UX39 209 aa13.4□□□□□ -0.26
PTPN18-201ENST00000175756 C2orf91Q6ZV80 131 aa13.4□□□□□ -0.26
PTPN18-201ENST00000175756 IGKV3-20P01619 116 aa13.4□□□□□ -0.27
PTPN18-201ENST00000175756 SCGB1C2P0DMR2 95 aa13.4□□□□□ -0.27
PTPN18-201ENST00000175756 CYSLTR1Q9Y271 337 aa13.4□□□□□ -0.27
PTPN18-201ENST00000175756 PDE6HQ13956 83 aa13.39□□□□□ -0.27
PTPN18-201ENST00000175756 DTX2Q86UW9 622 aa13.39□□□□□ -0.27
PTPN18-201ENST00000175756 MRPL35Q9NZE8 188 aaKnown RBP13.39□□□□□ -0.27
PTPN18-201ENST00000175756 PPBPP02775 128 aa13.39□□□□□ -0.27
PTPN18-201ENST00000175756 C8orf31Q8N9H6 132 aa13.39□□□□□ -0.27
PTPN18-201ENST00000175756 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.38□□□□□ -0.27
PTPN18-201ENST00000175756 FXYD2P54710 66 aa13.38□□□□□ -0.27
PTPN18-201ENST00000175756 H7C2G1 150 aa13.38□□□□□ -0.27
PTPN18-201ENST00000175756 ATP5LO75964 103 aa13.38□□□□□ -0.27
PTPN18-201ENST00000175756 APOMO95445 188 aa13.38□□□□□ -0.27
PTPN18-201ENST00000175756 ZNF479Q96JC4 524 aa13.38□□□□□ -0.27
PTPN18-201ENST00000175756 JMJD8Q96S16 334 aa13.38□□□□□ -0.27
PTPN18-201ENST00000175756 ZNF292O60281 2723 aa13.38□□□□□ -0.27
PTPN18-201ENST00000175756 A0A1W2PPM0 123 aa13.37□□□□□ -0.27
PTPN18-201ENST00000175756 K7EP34 96 aa13.37□□□□□ -0.27
PTPN18-201ENST00000175756 PAX2Q02962 417 aa13.37□□□□□ -0.27
PTPN18-201ENST00000175756 RNF5Q99942 180 aa13.37□□□□□ -0.27
PTPN18-201ENST00000175756 FAM74A4Q5TZK3 123 aa13.37□□□□□ -0.27
PTPN18-201ENST00000175756 FANCD2OSQ96PS1 177 aa13.37□□□□□ -0.27
PTPN18-201ENST00000175756 MYO9AB2RTY4 2548 aa13.37□□□□□ -0.27
PTPN18-201ENST00000175756 NACAE9PAV3 2078 aa13.36□□□□□ -0.27
PTPN18-201ENST00000175756 A0A1B0GWB2 263 aa13.36□□□□□ -0.27
PTPN18-201ENST00000175756 MRGPRG-AS1Q2M3A8 158 aa13.36□□□□□ -0.27
PTPN18-201ENST00000175756 ZNF418Q8TF45 676 aaPredicted RBP13.36□□□□□ -0.27
PTPN18-201ENST00000175756 TRGV3P03979 118 aa13.36□□□□□ -0.27
PTPN18-201ENST00000175756 PF4V1P10720 104 aa13.36□□□□□ -0.27
PTPN18-201ENST00000175756 C14orf178Q8N769 122 aaPredicted RBP13.36□□□□□ -0.27
PTPN18-201ENST00000175756 CFHR4Q92496 578 aa13.36□□□□□ -0.27
PTPN18-201ENST00000175756 AKAP13Q12802 2813 aa13.36□□□□□ -0.27
PTPN18-201ENST00000175756 ZZEF1O43149 2961 aa13.36□□□□□ -0.27
PTPN18-201ENST00000175756 CRYGBP07316 175 aa13.36□□□□□ -0.27
PTPN18-201ENST00000175756 CTSGP08311 255 aa13.35□□□□□ -0.27
PTPN18-201ENST00000175756 RNASE4P34096 147 aaKnown RBP13.35□□□□□ -0.27
PTPN18-201ENST00000175756 DEFB1P60022 68 aa13.35□□□□□ -0.27
PTPN18-201ENST00000175756 LAGE3Q14657 143 aa13.35□□□□□ -0.27
PTPN18-201ENST00000175756 ADAMTSL5Q6ZMM2 481 aa13.35□□□□□ -0.27
PTPN18-201ENST00000175756 BOD1L2Q8IYS8 172 aa13.35□□□□□ -0.27
PTPN18-201ENST00000175756 OR10J6PQ8NGY7 276 aa13.35□□□□□ -0.27
PTPN18-201ENST00000175756 ETDBQ3ZM63 59 aa13.35□□□□□ -0.27
PTPN18-201ENST00000175756 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.35□□□□□ -0.27
PTPN18-201ENST00000175756 OR5A1Q8NGJ0 315 aa13.35□□□□□ -0.27
PTPN18-201ENST00000175756 IGKV2D-26A0A0A0MRZ7 120 aa13.35□□□□□ -0.27
PTPN18-201ENST00000175756 ATP6V0E1O15342 81 aa13.35□□□□□ -0.27
PTPN18-201ENST00000175756 PRTN3P24158 256 aa13.35□□□□□ -0.27
PTPN18-201ENST00000175756 ATP5G2Q06055 141 aa13.35□□□□□ -0.27
PTPN18-201ENST00000175756 MRPL16Q9NX20 251 aaKnown RBP13.35□□□□□ -0.27
PTPN18-201ENST00000175756 H3BMG7 143 aa13.34□□□□□ -0.27
PTPN18-201ENST00000175756 CD300EQ496F6 205 aaPredicted RBP13.34□□□□□ -0.27
PTPN18-201ENST00000175756 SAMD13Q5VXD3 122 aa13.34□□□□□ -0.27
PTPN18-201ENST00000175756 NEGR1Q7Z3B1 354 aa13.34□□□□□ -0.27
PTPN18-201ENST00000175756 EEF1AKMT3Q96AZ1 226 aa13.34□□□□□ -0.27
PTPN18-201ENST00000175756 AGPAT4-IT1Q9H0P7 198 aa13.34□□□□□ -0.27
PTPN18-201ENST00000175756 RAXQ9Y2V3 346 aa13.34□□□□□ -0.27
PTPN18-201ENST00000175756 EPG5Q9HCE0 2579 aa13.34□□□□□ -0.27
PTPN18-201ENST00000175756 POLQO75417 2590 aa13.34□□□□□ -0.27
PTPN18-201ENST00000175756 SRSF1Q07955 248 aaKnown RBP eCLIP13.33□□□□□ -0.282e-7■□□□□ 9.5
PTPN18-201ENST00000175756 CSTL1Q9H114 145 aa13.33□□□□□ -0.28
PTPN18-201ENST00000175756 IGLV11-55A0A075B6I3 123 aa13.33□□□□□ -0.28
PTPN18-201ENST00000175756 TRBV25-1A0A075B6N4 114 aa13.33□□□□□ -0.28
PTPN18-201ENST00000175756 TEX48A0A1B0GUV7 120 aa13.33□□□□□ -0.28
PTPN18-201ENST00000175756 AGRNO00468 2067 aa13.32□□□□□ -0.28
PTPN18-201ENST00000175756 WI2-2373I1.2A0A1W2PRP0 233 aa13.32□□□□□ -0.28
PTPN18-201ENST00000175756 Q1RN00 199 aa13.32□□□□□ -0.28
PTPN18-201ENST00000175756 TMEM170BQ5T4T1 132 aa13.32□□□□□ -0.28
PTPN18-201ENST00000175756 SH2D6Q7Z4S9 175 aa13.31□□□□□ -0.28
PTPN18-201ENST00000175756 LRBAP50851 2863 aa13.31□□□□□ -0.28
PTPN18-201ENST00000175756 WNK1Q9H4A3 2382 aa13.31□□□□□ -0.28
PTPN18-201ENST00000175756 A0A096LNJ9 63 aa13.31□□□□□ -0.28
PTPN18-201ENST00000175756 BRD3OSQ6XYD6 125 aa13.31□□□□□ -0.28
PTPN18-201ENST00000175756 CHTOPQ9Y3Y2 248 aaKnown RBP13.31□□□□□ -0.28
PTPN18-201ENST00000175756 HIVEP3Q5T1R4 2406 aa13.31□□□□□ -0.28
PTPN18-201ENST00000175756 Q8NA96 180 aa13.31□□□□□ -0.28
PTPN18-201ENST00000175756 SRSF8Q9BRL6 282 aaKnown RBP13.31□□□□□ -0.28
PTPN18-201ENST00000175756 SLC50A1Q9BRV3 221 aa13.31□□□□□ -0.28
PTPN18-201ENST00000175756 LRRK2Q5S007 2527 aa13.3□□□□□ -0.28
PTPN18-201ENST00000175756 SONP18583 2426 aaKnown RBP13.3□□□□□ -0.28
PTPN18-201ENST00000175756 SAA4P35542 130 aa13.3□□□□□ -0.28
PTPN18-201ENST00000175756 PSMB2P49721 201 aa13.3□□□□□ -0.28
PTPN18-201ENST00000175756 RAB9AP51151 201 aa13.29□□□□□ -0.28
PTPN18-201ENST00000175756 ZNF815PA8K554 130 aa13.29□□□□□ -0.28
PTPN18-201ENST00000175756 Q5PR19 223 aa13.29□□□□□ -0.28
PTPN18-201ENST00000175756 Q6ZQT7 251 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms