RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 GAGE12JA6NER3 117 aa18.34■□□□□ 0.53
TARBP1-201ENST00000040877 GAGE1Q13065 139 aa18.34■□□□□ 0.53
TARBP1-201ENST00000040877 GAGE4Q13068 117 aa18.34■□□□□ 0.53
TARBP1-201ENST00000040877 GAGE5Q13069 117 aa18.34■□□□□ 0.53
TARBP1-201ENST00000040877 DEFB113Q30KQ7 82 aa18.34■□□□□ 0.53
TARBP1-201ENST00000040877 MUC6Q6W4X9 2439 aa18.34■□□□□ 0.53
TARBP1-201ENST00000040877 SSBP2P81877 361 aaPredicted RBP18.34■□□□□ 0.53
TARBP1-201ENST00000040877 IL15RAQ13261 267 aa18.34■□□□□ 0.53
TARBP1-201ENST00000040877 DEFB112Q30KQ8 113 aa18.34■□□□□ 0.53
TARBP1-201ENST00000040877 ZGRF1Q86YA3 2104 aa18.33■□□□□ 0.53
TARBP1-201ENST00000040877 ARFGEF3Q5TH69 2177 aa18.33■□□□□ 0.53
TARBP1-201ENST00000040877 A0A1B0GUS0 222 aa18.33■□□□□ 0.53
TARBP1-201ENST00000040877 OCIAD2Q56VL3 154 aa18.33■□□□□ 0.53
TARBP1-201ENST00000040877 DEFB104AQ8WTQ1 72 aa18.33■□□□□ 0.53
TARBP1-201ENST00000040877 V9GYV3 84 aa18.33■□□□□ 0.53
TARBP1-201ENST00000040877 ZFHX2Q9C0A1 2572 aaPredicted RBP18.33■□□□□ 0.53
TARBP1-201ENST00000040877 LENEPQ9Y5L5 61 aa18.33■□□□□ 0.52
TARBP1-201ENST00000040877 CENPVL3A0A0U1RRI6 287 aa18.33■□□□□ 0.52
TARBP1-201ENST00000040877 PLXND1Q9Y4D7 1925 aa18.32■□□□□ 0.52
TARBP1-201ENST00000040877 DOCK10Q96BY6 2186 aa18.32■□□□□ 0.52
TARBP1-201ENST00000040877 SMIM27A0A1W2PRY6 76 aa18.32■□□□□ 0.52
TARBP1-201ENST00000040877 SDHAF1A6NFY7 115 aa18.32■□□□□ 0.52
TARBP1-201ENST00000040877 NDUFS7O75251 213 aa18.32■□□□□ 0.52
TARBP1-201ENST00000040877 TSSC4Q9Y5U2 329 aaPredicted RBP18.32■□□□□ 0.52
TARBP1-201ENST00000040877 PMVKQ15126 192 aa18.32■□□□□ 0.52
TARBP1-201ENST00000040877 FOXI2Q6ZQN5 318 aa18.31■□□□□ 0.52
TARBP1-201ENST00000040877 DOCK9Q9BZ29 2069 aa18.31■□□□□ 0.52
TARBP1-201ENST00000040877 LGALS1P09382 135 aaKnown RBP18.3■□□□□ 0.52
TARBP1-201ENST00000040877 CHAC1Q9BUX1 264 aa18.3■□□□□ 0.52
TARBP1-201ENST00000040877 NPC2P61916 151 aa18.3■□□□□ 0.52
TARBP1-201ENST00000040877 VWC2Q2TAL6 325 aa18.3■□□□□ 0.52
TARBP1-201ENST00000040877 NPBQ8NG41 125 aa18.3■□□□□ 0.52
TARBP1-201ENST00000040877 DAZAP2Q15038 168 aaPredicted RBP18.3■□□□□ 0.52
TARBP1-201ENST00000040877 TMEM243Q9BU79 118 aa18.3■□□□□ 0.52
TARBP1-201ENST00000040877 MRPL51Q4U2R6 128 aaKnown RBP18.3■□□□□ 0.52
TARBP1-201ENST00000040877 SLAQ13239 276 aa18.29■□□□□ 0.52
TARBP1-201ENST00000040877 ZNF114Q8NC26 417 aa18.29■□□□□ 0.52
TARBP1-201ENST00000040877 DLX4Q92988 240 aaPredicted RBP18.29■□□□□ 0.52
TARBP1-201ENST00000040877 RBAKDNA6NC62 111 aa18.29■□□□□ 0.52
TARBP1-201ENST00000040877 IGHV4-59P01825 116 aa18.29■□□□□ 0.52
TARBP1-201ENST00000040877 GAGE7O76087 117 aa18.28■□□□□ 0.52
TARBP1-201ENST00000040877 GAGE12FP0CL80 117 aa18.28■□□□□ 0.52
TARBP1-201ENST00000040877 GAGE12GP0CL81 117 aa18.28■□□□□ 0.52
TARBP1-201ENST00000040877 GAGE12IP0CL82 117 aa18.28■□□□□ 0.52
TARBP1-201ENST00000040877 PYGO2Q9BRQ0 406 aa18.28■□□□□ 0.52
TARBP1-201ENST00000040877 FOXE3Q13461 319 aa18.28■□□□□ 0.52
TARBP1-201ENST00000040877 IGHV4-61A0A0C4DH41 118 aa18.28■□□□□ 0.52
TARBP1-201ENST00000040877 F8WEM9 126 aa18.28■□□□□ 0.52
TARBP1-201ENST00000040877 ZC2HC1AQ96GY0 325 aa18.27■□□□□ 0.51
TARBP1-201ENST00000040877 DNAJC30Q96LL9 226 aa18.27■□□□□ 0.51
TARBP1-201ENST00000040877 ADAMTSL5Q6ZMM2 481 aa18.27■□□□□ 0.51
TARBP1-201ENST00000040877 FGF23Q9GZV9 251 aaPredicted RBP18.27■□□□□ 0.51
TARBP1-201ENST00000040877 ZNF561-AS1K7EIQ3 104 aa18.26■□□□□ 0.51
TARBP1-201ENST00000040877 TRAV12-2A0A075B6T6 113 aa18.26■□□□□ 0.51
TARBP1-201ENST00000040877 IGLC2P0DOY2 106 aa18.26■□□□□ 0.51
TARBP1-201ENST00000040877 IGLC3P0DOY3 106 aa18.26■□□□□ 0.51
TARBP1-201ENST00000040877 ZNRF2Q8NHG8 242 aa18.26■□□□□ 0.51
TARBP1-201ENST00000040877 C20orf78Q9BR46 151 aa18.26■□□□□ 0.51
TARBP1-201ENST00000040877 PRSS57Q6UWY2 283 aa18.25■□□□□ 0.51
TARBP1-201ENST00000040877 LAMTOR3Q9UHA4 124 aa18.25■□□□□ 0.51
TARBP1-201ENST00000040877 LTAP01374 205 aa18.25■□□□□ 0.51
TARBP1-201ENST00000040877 FAM208BQ5VWN6 2430 aa18.25■□□□□ 0.51
TARBP1-201ENST00000040877 IGHV3-16A0A0C4DH30 117 aa18.25■□□□□ 0.51
TARBP1-201ENST00000040877 SMIM2Q9BVW6 85 aa18.25■□□□□ 0.51
TARBP1-201ENST00000040877 HOXD3P31249 432 aaPredicted RBP18.25■□□□□ 0.51
TARBP1-201ENST00000040877 C10orf105Q8TEF2 133 aa18.25■□□□□ 0.51
TARBP1-201ENST00000040877 ADORA2A-AS1P86434 159 aa18.24■□□□□ 0.51
TARBP1-201ENST00000040877 SPAG8Q99932 426 aaPredicted RBP18.24■□□□□ 0.51
TARBP1-201ENST00000040877 SPINK8P0C7L1 97 aa18.24■□□□□ 0.51
TARBP1-201ENST00000040877 CFHR3Q02985 330 aa18.24■□□□□ 0.51
TARBP1-201ENST00000040877 RMI2Q96E14 147 aa18.24■□□□□ 0.51
TARBP1-201ENST00000040877 FBXL19-AS1Q494R0 122 aa18.23■□□□□ 0.51
TARBP1-201ENST00000040877 Q6ZWC4 215 aa18.23■□□□□ 0.51
TARBP1-201ENST00000040877 MED13LQ71F56 2210 aa18.23■□□□□ 0.51
TARBP1-201ENST00000040877 C2orf82Q6UX34 121 aa18.23■□□□□ 0.51
TARBP1-201ENST00000040877 DENND4CQ5VZ89 1909 aa18.22■□□□□ 0.51
TARBP1-201ENST00000040877 IGHV4-30-2A0A087WSY4 118 aa18.22■□□□□ 0.51
TARBP1-201ENST00000040877 CCL24O00175 119 aa18.21■□□□□ 0.51
TARBP1-201ENST00000040877 KLF12Q9Y4X4 402 aa18.21■□□□□ 0.51
TARBP1-201ENST00000040877 IGHV7-81A0A0B4J1V7 117 aa18.21■□□□□ 0.51
TARBP1-201ENST00000040877 LGALS9BQ3B8N2 356 aa18.21■□□□□ 0.51
TARBP1-201ENST00000040877 LGALS9CQ6DKI2 356 aa18.21■□□□□ 0.51
TARBP1-201ENST00000040877 BDP1A6H8Y1 2624 aa18.2■□□□□ 0.5
TARBP1-201ENST00000040877 STPG4Q8N801 248 aa18.2■□□□□ 0.5
TARBP1-201ENST00000040877 SPRNQ5BIV9 151 aa18.2■□□□□ 0.5
TARBP1-201ENST00000040877 IGFBPL1Q8WX77 278 aa18.2■□□□□ 0.5
TARBP1-201ENST00000040877 A0A1W2PNU3 283 aaPredicted RBP18.19■□□□□ 0.5
TARBP1-201ENST00000040877 K7EMI3 77 aa18.19■□□□□ 0.5
TARBP1-201ENST00000040877 HLA-DRB4P13762 266 aa18.19■□□□□ 0.5
TARBP1-201ENST00000040877 Q71RC1 249 aaPredicted RBP18.19■□□□□ 0.5
TARBP1-201ENST00000040877 RNF152Q8N8N0 203 aa18.19■□□□□ 0.5
TARBP1-201ENST00000040877 HLA-DRB4X5D2U9 266 aa18.19■□□□□ 0.5
TARBP1-201ENST00000040877 LYPD6Q86Y78 171 aa18.19■□□□□ 0.5
TARBP1-201ENST00000040877 AGPAT4-IT1Q9H0P7 198 aa18.19■□□□□ 0.5
TARBP1-201ENST00000040877 INS-IGF2F8WCM5 200 aa18.18■□□□□ 0.5
TARBP1-201ENST00000040877 RHOHQ15669 191 aa18.18■□□□□ 0.5
TARBP1-201ENST00000040877 IGLV11-55A0A075B6I3 123 aa18.18■□□□□ 0.5
TARBP1-201ENST00000040877 SEM1Q6ZVN7 128 aa18.18■□□□□ 0.5
TARBP1-201ENST00000040877 SIGLEC8Q9NYZ4 499 aa18.18■□□□□ 0.5
TARBP1-201ENST00000040877 SHANK1Q9Y566 2161 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 180.2 ms