RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Trav3-1Q5R1I8 114 aa12.52□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Fam222bQ6P539 562 aa12.52□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Slc35d2Q762D5 326 aa12.52□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 B430218F22RikQ8BQR5 223 aa12.52□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Olfr961Q9EQ84 314 aa12.52□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Tspan7Q62283 249 aa12.52□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Ntn3Q9R1A3 580 aa12.52□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Tmem177Q8BPE4 311 aa12.51□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 ChodlQ9CXM0 273 aa12.51□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Ubr3Q5U430 1889 aa12.51□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Igkv1-133A0A0B4J1H8 120 aa12.51□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Gm45717A0A1B0GT68 152 aa12.51□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 P01637 128 aa12.51□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 NrepQ07475 68 aa12.51□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Ceacam10Q61400 265 aa12.51□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Srrm4Q8BKA3 608 aa12.51□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Olfr470Q8VF65 314 aa12.51□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Ssbp1Q9CYR0 152 aaKnown RBP12.51□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Ca11O70354 328 aa12.51□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 HcstQ9QUJ0 79 aa12.51□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 PhipQ8VDD9 1821 aaKnown RBP12.51□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Zcwpw2Q08EN7 125 aa12.51□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Q9CQ90 155 aa12.51□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Klk1b21Q61759 261 aa12.5□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Olfr1012Q8VFJ7 311 aa12.5□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 AmtnQ9D3J8 213 aa12.5□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Cd8bP10300 213 aa12.5□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Efnb1P52795 345 aa12.5□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Klk1b24Q61754 263 aa12.5□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 OstcQ78XF5 149 aa12.5□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Gm45861A0A1B0GRY3 1923 aa12.5□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Unc13cQ8K0T7 2210 aa12.5□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Slc25a53A2AF28 346 aa12.5□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Fgf4P11403 202 aa12.5□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Dynlt3P56387 116 aa12.5□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Nanos1Q80WY3 267 aa12.5□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 C730034F03RikQ8BGL5 111 aa12.5□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Ssbp3Q9D032 388 aa12.5□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Gbf1Q6DFZ1 1861 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 A630073D07RikE9PWS6 100 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Olfr92L7N475 312 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 B230104I21RikQ3USW4 141 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Tcf23Q9JLR5 209 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Esp24A8R0V6 68 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Q0VG49 157 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Olfr873Q8VFJ0 319 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Zfpl1Q9DB43 310 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 MNCb-2875Q9DCB3 74 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Prss30Q9QYZ9 310 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Fxyd1Q9Z239 92 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Gm21394Q497R7 227 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Znf787Q8BIF9 381 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Chrdl2Q8VEA6 426 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Ccl8Q9Z121 97 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Chd3B1AR17 2055 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 S100a4P07091 101 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Timp1P12032 205 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 VegfcP97953 415 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Zfp72Q0VFY0 435 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Trav15-1-dv6-1Q5R1D2 117 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Obp2aQ8K1H9 176 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Olfr484Q8VFD3 321 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Mrpl42Q9CPV3 142 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Ube2cQ9D1C1 179 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Rnd2Q9QYM5 227 aa12.49□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 A930017K11RikE0CXQ2 571 aa12.48□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Olfr94Q6UAH0 386 aa12.48□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Ndufb8Q9D6J5 186 aa12.48□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 UngP97931 306 aa12.48□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Gm5615Q3UW02 101 aa12.48□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Gng7Q61016 68 aa12.48□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Rasl11aQ6IMB1 242 aa12.48□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Gpa33Q9JKA5 319 aa12.48□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 C2cd4aE9Q861 334 aa12.48□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Klk1b22P15948 259 aa12.48□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 C1ql2Q8CFR0 287 aa12.48□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Zc3h3Q8CHP0 950 aa12.48□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 StradbQ8K4T3 418 aa12.48□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Ppp1r27Q9D119 154 aa12.48□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Adamts17E9Q4D1 1122 aa12.48□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 HhexP43120 271 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Znf474Q6V5K9 347 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Trpt1Q8K3A2 249 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Q8VE95 218 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Ufc1Q9CR09 167 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 G6pc2Q9Z186 355 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Dicer1Q8R418 1916 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Nrxn2E9Q7X7 1710 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Trav12d-1A0N8R0 115 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Frrs1lB1AXV0 293 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 C1qtnf9Q4ZJN1 333 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 D330020A13RikQ8C799 211 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Fzr1Q9R1K5 493 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Rnf7Q9WTZ1 113 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Trav5-1A0A075B5Z7 114 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Gm9772F6XPD8 135 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Prdx2Q61171 198 aaKnown RBP12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Olfr877Q8VF62 311 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Tmem100Q9CQG9 134 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Tnfrsf13cQ9D8D0 175 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 69.9 ms