RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Prok2Q9QXU7 128 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Eif3gQ9Z1D1 320 aaKnown RBP9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Ighv7-3A0A075B5R2 120 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Ldlrad3A2AR95 345 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm12830F6XVH0 157 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 SelenotP62342 195 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 G6pcP35576 357 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Ypel2Q65Z95 119 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Tmem230Q8CIB6 120 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Sft2d3Q9CSV6 209 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Ypel1Q9ESC7 118 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Cyb561d1A2AE42 229 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm20532G3UXR8 106 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Sumo1P63166 101 aaKnown RBP9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Prss3Q792Z0 246 aaKnown RBP9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr873Q8VFJ0 319 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Tctex1d2Q9CQ66 144 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Tmem126aQ9D8Y1 196 aa9.93□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Ca11O70354 328 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr143P34985 313 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Tmem40Q4FJU9 225 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 AY761185Q5ERI8 94 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Fam117aQ7TNF9 451 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Slc17a9Q8VCL5 447 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Fgfrl1Q91V87 529 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 4931428L18RikQ9D4S9 127 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 AplnrQ9WV08 377 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Pf4Q9Z126 105 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm7697A0A0J9YUH2 350 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm9495A0A0J9YUZ3 350 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Igkv14-111A0A140T8P9 117 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr218E9PWV2 313 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 BC030500E9Q6W0 185 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Neurog3P70661 214 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Obox7Q4KL20 218 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 PmelQ60696 626 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Cbln2Q8BGU2 224 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 6030452D12RikQ8CD33 222 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Nkg7Q99PA5 165 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Zfp931A2AHM2 298 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Vmn1r194J3JS27 296 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm21775J3KMK6 180 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Adrb3P25962 400 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Tnfrsf26P83626 204 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Prrx2Q06348 247 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr1465Q7TQR2 307 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 RnasekQ8K3C0 98 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Sult2a4L7N245 285 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Lrcol1Q3URS3 161 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 SlaQ60898 281 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr480Q8VEZ0 312 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Lipt2Q9D009 231 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm28845A0A087WR76 214 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 MpzP27573 248 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 F2rl1P55086 399 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gpr183Q3U6B2 357 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Vdac1Q60932 296 aaKnown RBP9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Ceacam9Q78T27 234 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Tctex1d1Q9D5I4 173 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 ManbalQ9D8X0 85 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Osr1Q9WVG7 266 aa9.92□□□□□ -0.82
Pcif1-201ENSMUST00000041643 B1ARW8 110 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Zfp764E9QAP1 431 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Bmpr1bP36898 502 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Traf4Q61382 470 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr123Q8VFQ1 309 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Ms4a8Q99N10 290 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Prr23a3Q9CWP9 254 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gtf3c1Q8K284 2101 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 1700031F05RikB1AX30 191 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr139Q60891 315 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Pafah1b2Q61206 229 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Ndufs8Q8K3J1 212 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Prelid1Q8R107 217 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 ChodlQ9CXM0 273 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Esp38A8R0X1 80 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm17727E9Q4V7 109 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm10881P01642 115 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Dppa1Q810Y7 116 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Zdhhc16Q9ESG8 361 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm14408E9Q6B9 136 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm21719J3KMI9 230 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Dnase2P56542 353 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Klf14Q19A41 325 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Coq2Q66JT7 374 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 MavsQ8VCF0 503 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr1440Q8VFV4 315 aa9.91□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr1202Q8VF98 309 aa9.9□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Mrpl51Q9CPY1 128 aa9.9□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gm3512L7N206 146 aa9.9□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Tcrg-V1P06325 135 aa9.9□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Q24JP4 165 aa9.9□□□□□ -0.82
Pcif1-201ENSMUST00000041643 ParlQ5XJY4 377 aa9.9□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Olfr495Q8VF12 330 aa9.9□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Dram1Q9DC58 238 aa9.9□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Ighv1-47A0A0A6YY41 117 aa9.9□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Trav13n-4A0A0G2JG01 110 aa9.9□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Elovl5Q8BHI7 299 aa9.9□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Gpr87Q99MT7 358 aa9.9□□□□□ -0.82
Pcif1-201ENSMUST00000041643 Ighv9-4A0A0A6YWH6 117 aa9.9□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms