RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 C20orf144Q9BQM9 153 aa11.75□□□□□ -0.53
RGPD1-205ENST00000641339 NIPSNAP3BQ9BS92 247 aa11.75□□□□□ -0.53
RGPD1-205ENST00000641339 Q9H3A6 140 aa11.75□□□□□ -0.53
RGPD1-205ENST00000641339 BIRC6Q9NR09 4857 aa11.74□□□□□ -0.53
RGPD1-205ENST00000641339 H7BYZ3 331 aa11.74□□□□□ -0.53
RGPD1-205ENST00000641339 J3KRW8 73 aa11.74□□□□□ -0.53
RGPD1-205ENST00000641339 HMGB3O15347 200 aaKnown RBP11.74□□□□□ -0.53
RGPD1-205ENST00000641339 LY6G6CO95867 125 aa11.74□□□□□ -0.53
RGPD1-205ENST00000641339 LEPP41159 167 aa11.74□□□□□ -0.53
RGPD1-205ENST00000641339 SERF2P84101 59 aa11.74□□□□□ -0.53
RGPD1-205ENST00000641339 PQLC2Q6ZP29 291 aa11.74□□□□□ -0.53
RGPD1-205ENST00000641339 TEX48A0A1B0GUV7 120 aa11.73□□□□□ -0.53
RGPD1-205ENST00000641339 KLLNB2CW77 178 aa11.73□□□□□ -0.53
RGPD1-205ENST00000641339 ZNF324O75467 553 aaPredicted RBP11.73□□□□□ -0.53
RGPD1-205ENST00000641339 HTN1P15515 57 aa11.73□□□□□ -0.53
RGPD1-205ENST00000641339 TCTAP57738 103 aa11.73□□□□□ -0.53
RGPD1-205ENST00000641339 RNASE8Q8TDE3 154 aaKnown RBP11.73□□□□□ -0.53
RGPD1-205ENST00000641339 CYTL1Q9NRR1 136 aa11.73□□□□□ -0.53
RGPD1-205ENST00000641339 IGHV4-4A0A075B6R2 117 aa11.72□□□□□ -0.53
RGPD1-205ENST00000641339 TRAV12-3A0A0B4J271 114 aa11.72□□□□□ -0.53
RGPD1-205ENST00000641339 SLC25A5P05141 298 aaKnown RBP11.72□□□□□ -0.53
RGPD1-205ENST00000641339 STAG3L2P0CL84 134 aa11.72□□□□□ -0.53
RGPD1-205ENST00000641339 STAG3L3P0CL85 134 aa11.72□□□□□ -0.53
RGPD1-205ENST00000641339 CRISP2P16562 243 aa11.72□□□□□ -0.53
RGPD1-205ENST00000641339 CD300CQ08708 224 aa11.72□□□□□ -0.53
RGPD1-205ENST00000641339 LGALS9CQ6DKI2 356 aa11.72□□□□□ -0.53
RGPD1-205ENST00000641339 SUN5Q8TC36 379 aa11.72□□□□□ -0.53
RGPD1-205ENST00000641339 RAB24Q969Q5 203 aa11.72□□□□□ -0.53
RGPD1-205ENST00000641339 ZNF492Q9P255 531 aa11.72□□□□□ -0.53
RGPD1-205ENST00000641339 BORCS7-ASMTA0A0B4J1R7 106 aa11.71□□□□□ -0.53
RGPD1-205ENST00000641339 RBAKDNA6NC62 111 aa11.71□□□□□ -0.53
RGPD1-205ENST00000641339 LYRM9A8MSI8 78 aa11.71□□□□□ -0.53
RGPD1-205ENST00000641339 ARPC5O15511 151 aa11.71□□□□□ -0.53
RGPD1-205ENST00000641339 MBP02144 154 aa11.71□□□□□ -0.53
RGPD1-205ENST00000641339 CDC34P49427 236 aaPredicted RBP11.71□□□□□ -0.53
RGPD1-205ENST00000641339 ZFAND2AQ8N6M9 145 aa11.71□□□□□ -0.53
RGPD1-205ENST00000641339 OR11H4Q8NGC9 324 aa11.71□□□□□ -0.53
RGPD1-205ENST00000641339 GNPNAT1Q96EK6 184 aaPredicted RBP11.71□□□□□ -0.53
RGPD1-205ENST00000641339 C16orf74Q96GX8 76 aa11.71□□□□□ -0.53
RGPD1-205ENST00000641339 C7orf71A4D174 169 aa11.7□□□□□ -0.54
RGPD1-205ENST00000641339 PGPA6NDG6 321 aa11.7□□□□□ -0.54
RGPD1-205ENST00000641339 DIRC3C9JPN6 131 aa11.7□□□□□ -0.54
RGPD1-205ENST00000641339 TAAR5O14804 337 aa11.7□□□□□ -0.54
RGPD1-205ENST00000641339 NMBP08949 121 aa11.7□□□□□ -0.54
RGPD1-205ENST00000641339 ARL14EPLP0DKL9 152 aa11.7□□□□□ -0.54
RGPD1-205ENST00000641339 BTN1A1Q13410 526 aa11.7□□□□□ -0.54
RGPD1-205ENST00000641339 TMEM78Q5T7P6 136 aa11.7□□□□□ -0.54
RGPD1-205ENST00000641339 PRR9Q5T870 116 aa11.7□□□□□ -0.54
RGPD1-205ENST00000641339 ZNF493Q6ZR52 646 aa11.7□□□□□ -0.54
RGPD1-205ENST00000641339 SSX7Q7RTT5 188 aa11.7□□□□□ -0.54
RGPD1-205ENST00000641339 TMEM263Q8WUH6 116 aaKnown RBP11.7□□□□□ -0.54
RGPD1-205ENST00000641339 OTORQ9NRC9 128 aa11.7□□□□□ -0.54
RGPD1-205ENST00000641339 RNASE4P34096 147 aaKnown RBP11.69□□□□□ -0.54
RGPD1-205ENST00000641339 CSN1S1P47710 185 aa11.69□□□□□ -0.54
RGPD1-205ENST00000641339 ZNF138P52744 262 aa11.69□□□□□ -0.54
RGPD1-205ENST00000641339 DAD1P61803 113 aa11.69□□□□□ -0.54
RGPD1-205ENST00000641339 Q6ZQT7 251 aa11.69□□□□□ -0.54
RGPD1-205ENST00000641339 Q8TAT8 98 aa11.69□□□□□ -0.54
RGPD1-205ENST00000641339 HYLS1Q96M11 299 aa11.69□□□□□ -0.54
RGPD1-205ENST00000641339 TIMM8BQ9Y5J9 83 aaPredicted RBP11.69□□□□□ -0.54
RGPD1-205ENST00000641339 TRBV7-9A0A0J9YWB2 115 aa11.68□□□□□ -0.54
RGPD1-205ENST00000641339 GCHFRP30047 84 aa11.68□□□□□ -0.54
RGPD1-205ENST00000641339 ZNF726P1Q15940 193 aa11.68□□□□□ -0.54
RGPD1-205ENST00000641339 RXFP4Q8TDU9 374 aa11.68□□□□□ -0.54
RGPD1-205ENST00000641339 PYGO2Q9BRQ0 406 aa11.68□□□□□ -0.54
RGPD1-205ENST00000641339 LINC00467Q9BRT7 94 aa11.68□□□□□ -0.54
RGPD1-205ENST00000641339 ACTR3CQ9C0K3 210 aaPredicted RBP11.68□□□□□ -0.54
RGPD1-205ENST00000641339 NOP10Q9NPE3 64 aaKnown RBP11.68□□□□□ -0.54
RGPD1-205ENST00000641339 HMSDA8MTL9 139 aa11.67□□□□□ -0.54
RGPD1-205ENST00000641339 GPX1P07203 203 aa11.67□□□□□ -0.54
RGPD1-205ENST00000641339 DEFB130BP0DP73 79 aa11.67□□□□□ -0.54
RGPD1-205ENST00000641339 DEFB130AP0DP74 79 aa11.67□□□□□ -0.54
RGPD1-205ENST00000641339 KCNRGQ8N5I3 272 aa11.67□□□□□ -0.54
RGPD1-205ENST00000641339 ARL6IP6Q8N6S5 226 aa11.67□□□□□ -0.54
RGPD1-205ENST00000641339 DNAH6Q9C0G6 4158 aa11.66□□□□□ -0.54
RGPD1-205ENST00000641339 CXorf1O96002 111 aa11.66□□□□□ -0.54
RGPD1-205ENST00000641339 HTN3P15516 51 aa11.66□□□□□ -0.54
RGPD1-205ENST00000641339 ZNF345Q14585 488 aa11.66□□□□□ -0.54
RGPD1-205ENST00000641339 CCDC28AQ8IWP9 274 aa11.66□□□□□ -0.54
RGPD1-205ENST00000641339 NDUFAF3Q9BU61 184 aa11.66□□□□□ -0.54
RGPD1-205ENST00000641339 FRAS1Q86XX4 4008 aa11.65□□□□□ -0.54
RGPD1-205ENST00000641339 FAM74A1Q5RGS3 127 aa11.65□□□□□ -0.54
RGPD1-205ENST00000641339 LINC00612Q8N6U2 182 aa11.65□□□□□ -0.54
RGPD1-205ENST00000641339 C11orf72Q8NBR9 251 aa11.65□□□□□ -0.54
RGPD1-205ENST00000641339 CMTM2Q8TAZ6 248 aa11.65□□□□□ -0.54
RGPD1-205ENST00000641339 TMED6Q8WW62 240 aa11.65□□□□□ -0.54
RGPD1-205ENST00000641339 ST6GAL2Q96JF0 529 aa11.65□□□□□ -0.54
RGPD1-205ENST00000641339 FAM210BQ96KR6 192 aa11.65□□□□□ -0.54
RGPD1-205ENST00000641339 CBY3A6NI87 242 aa11.64□□□□□ -0.55
RGPD1-205ENST00000641339 GNG5P63218 68 aa11.64□□□□□ -0.55
RGPD1-205ENST00000641339 ANXA2RQ3ZCQ2 193 aa11.64□□□□□ -0.55
RGPD1-205ENST00000641339 GOLT1AQ6ZVE7 132 aa11.64□□□□□ -0.55
RGPD1-205ENST00000641339 TVP23CQ96ET8 276 aa11.64□□□□□ -0.55
RGPD1-205ENST00000641339 ARPC5LQ9BPX5 153 aa11.64□□□□□ -0.55
RGPD1-205ENST00000641339 TP53TG3Q9ULZ0 132 aa11.64□□□□□ -0.55
RGPD1-205ENST00000641339 RPH3ALQ9UNE2 315 aa11.64□□□□□ -0.55
RGPD1-205ENST00000641339 LENEPQ9Y5L5 61 aa11.64□□□□□ -0.55
RGPD1-205ENST00000641339 CTXND1A0A1B0GTU2 59 aa11.63□□□□□ -0.55
RGPD1-205ENST00000641339 DAZ2Q13117 558 aaKnown RBP11.63□□□□□ -0.55
RGPD1-205ENST00000641339 Q6ZNX1 250 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms