RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 SLAQ13239 276 aa13.93□□□□□ -0.18
SCARB2-223ENST00000640640 CRIP3Q6Q6R5 217 aa13.93□□□□□ -0.18
SCARB2-223ENST00000640640 TMEM158Q8WZ71 300 aa13.93□□□□□ -0.18
SCARB2-223ENST00000640640 MCRIP2Q9BUT9 160 aaKnown RBP13.93□□□□□ -0.18
SCARB2-223ENST00000640640 CD28P10747 220 aa13.93□□□□□ -0.18
SCARB2-223ENST00000640640 HTN3P15516 51 aa13.93□□□□□ -0.18
SCARB2-223ENST00000640640 C21orf62-AS1Q17RA5 79 aa13.93□□□□□ -0.18
SCARB2-223ENST00000640640 C8orf86Q6ZUL3 223 aa13.93□□□□□ -0.18
SCARB2-223ENST00000640640 NCKAP5O14513 1909 aa13.93□□□□□ -0.18
SCARB2-223ENST00000640640 TRGV4A0A0C4DH28 118 aa13.92□□□□□ -0.18
SCARB2-223ENST00000640640 ORAOV1Q8WV07 137 aa13.92□□□□□ -0.18
SCARB2-223ENST00000640640 FAM120AOSQ5T036 256 aa13.92□□□□□ -0.18
SCARB2-223ENST00000640640 IGKV3D-20A0A0C4DH25 116 aa13.92□□□□□ -0.18
SCARB2-223ENST00000640640 ZNF815PA8K554 130 aa13.92□□□□□ -0.18
SCARB2-223ENST00000640640 GTSCR1Q86UQ5 136 aa13.92□□□□□ -0.18
SCARB2-223ENST00000640640 CEP192Q8TEP8 1941 aa13.92□□□□□ -0.18
SCARB2-223ENST00000640640 CHD3Q12873 2000 aaKnown RBP13.91□□□□□ -0.18
SCARB2-223ENST00000640640 SMIM27A0A1W2PRY6 76 aa13.91□□□□□ -0.18
SCARB2-223ENST00000640640 GUSBP1Q15486 140 aa13.91□□□□□ -0.18
SCARB2-223ENST00000640640 FAM104BQ5XKR9 115 aa13.91□□□□□ -0.18
SCARB2-223ENST00000640640 OR2K2Q8NGT1 345 aa13.91□□□□□ -0.18
SCARB2-223ENST00000640640 IGHV3-73A0A0B4J1V6 119 aa13.91□□□□□ -0.18
SCARB2-223ENST00000640640 NDUFA4O00483 81 aa13.91□□□□□ -0.18
SCARB2-223ENST00000640640 VCYO14598 125 aa13.91□□□□□ -0.18
SCARB2-223ENST00000640640 NDUFS6O75380 124 aaKnown RBP13.91□□□□□ -0.18
SCARB2-223ENST00000640640 DEFB131AP59861 70 aa13.91□□□□□ -0.18
SCARB2-223ENST00000640640 ASPHD1Q5U4P2 390 aa13.91□□□□□ -0.18
SCARB2-223ENST00000640640 Q8NA96 180 aa13.91□□□□□ -0.18
SCARB2-223ENST00000640640 OR9G4Q8NGQ1 327 aa13.91□□□□□ -0.18
SCARB2-223ENST00000640640 IGFBPL1Q8WX77 278 aa13.91□□□□□ -0.18
SCARB2-223ENST00000640640 PTPRSQ13332 1948 aa13.9□□□□□ -0.18
SCARB2-223ENST00000640640 TNFRSF6BO95407 300 aa13.9□□□□□ -0.18
SCARB2-223ENST00000640640 Q6ZPA2 131 aa13.9□□□□□ -0.18
SCARB2-223ENST00000640640 OR13C6PQ8NH95 151 aa13.9□□□□□ -0.18
SCARB2-223ENST00000640640 PRSS46E5RG02 174 aa13.9□□□□□ -0.18
SCARB2-223ENST00000640640 CMC4P56277 68 aaPredicted RBP13.9□□□□□ -0.18
SCARB2-223ENST00000640640 K7EN84 100 aa13.9□□□□□ -0.18
SCARB2-223ENST00000640640 HSD52Q0P140 79 aa13.9□□□□□ -0.18
SCARB2-223ENST00000640640 CSTL1Q9H114 145 aa13.9□□□□□ -0.18
SCARB2-223ENST00000640640 HOXB4P17483 251 aaPredicted RBP13.89□□□□□ -0.19
SCARB2-223ENST00000640640 ADORA2A-AS1P86434 159 aa13.89□□□□□ -0.19
SCARB2-223ENST00000640640 ZNF415Q09FC8 603 aa13.89□□□□□ -0.19
SCARB2-223ENST00000640640 HIVEP2P31629 2446 aa13.89□□□□□ -0.19
SCARB2-223ENST00000640640 A0A087WWL8 130 aa13.89□□□□□ -0.19
SCARB2-223ENST00000640640 SEC11AP67812 179 aa13.89□□□□□ -0.19
SCARB2-223ENST00000640640 ZC2HC1BQ5TFG8 222 aa13.89□□□□□ -0.19
SCARB2-223ENST00000640640 ZC2HC1AQ96GY0 325 aa13.89□□□□□ -0.19
SCARB2-223ENST00000640640 PLXNB1O43157 2135 aa13.89□□□□□ -0.19
SCARB2-223ENST00000640640 C17orf77Q96MU5 243 aa13.89□□□□□ -0.19
SCARB2-223ENST00000640640 KMT2EQ8IZD2 1858 aa13.88□□□□□ -0.19
SCARB2-223ENST00000640640 CR1LQ2VPA4 569 aa13.88□□□□□ -0.19
SCARB2-223ENST00000640640 RITA1Q96K30 269 aa13.88□□□□□ -0.19
SCARB2-223ENST00000640640 A0A1B0GWB2 263 aa13.88□□□□□ -0.19
SCARB2-223ENST00000640640 SFTA2Q6UW10 78 aa13.88□□□□□ -0.19
SCARB2-223ENST00000640640 NAV3Q8IVL0 2385 aa13.88□□□□□ -0.19
SCARB2-223ENST00000640640 LINC00469Q8N7U9 141 aa13.87□□□□□ -0.19
SCARB2-223ENST00000640640 Q96MF0 132 aa13.87□□□□□ -0.19
SCARB2-223ENST00000640640 UTRNP46939 3433 aa13.87□□□□□ -0.19
SCARB2-223ENST00000640640 TRGV1A0A0A0MS02 117 aa13.87□□□□□ -0.19
SCARB2-223ENST00000640640 IGKV1-17P01599 117 aa13.87□□□□□ -0.19
SCARB2-223ENST00000640640 POLR3KQ9Y2Y1 108 aaPredicted RBP13.87□□□□□ -0.19
SCARB2-223ENST00000640640 IGLV1-47P01700 117 aa13.87□□□□□ -0.19
SCARB2-223ENST00000640640 MPV17L2Q567V2 206 aa13.87□□□□□ -0.19
SCARB2-223ENST00000640640 DNAL4O96015 105 aa13.87□□□□□ -0.19
SCARB2-223ENST00000640640 UBE2E2Q96LR5 201 aa13.87□□□□□ -0.19
SCARB2-223ENST00000640640 ODF3L1Q8IXM7 274 aa13.86□□□□□ -0.19
SCARB2-223ENST00000640640 VGLL1Q99990 258 aa13.86□□□□□ -0.19
SCARB2-223ENST00000640640 CENPVL3A0A0U1RRI6 287 aa13.86□□□□□ -0.19
SCARB2-223ENST00000640640 SPOCK3Q9BQ16 436 aa13.86□□□□□ -0.19
SCARB2-223ENST00000640640 SPINK13Q1W4C9 94 aa13.86□□□□□ -0.19
SCARB2-223ENST00000640640 J3QLI3 93 aa13.86□□□□□ -0.19
SCARB2-223ENST00000640640 IGHV3-64A0A075B6Q5 118 aa13.85□□□□□ -0.19
SCARB2-223ENST00000640640 A0A087X0K7 114 aa13.85□□□□□ -0.19
SCARB2-223ENST00000640640 K7EIM0 57 aa13.85□□□□□ -0.19
SCARB2-223ENST00000640640 PROP1O75360 226 aa13.85□□□□□ -0.19
SCARB2-223ENST00000640640 MRPS16Q9Y3D3 137 aaKnown RBP13.85□□□□□ -0.19
SCARB2-223ENST00000640640 IGHV4-61A0A0C4DH41 118 aa13.85□□□□□ -0.19
SCARB2-223ENST00000640640 PLNP26678 52 aa13.85□□□□□ -0.19
SCARB2-223ENST00000640640 RPL36AP83881 106 aaKnown RBP13.85□□□□□ -0.19
SCARB2-223ENST00000640640 PRSS57Q6UWY2 283 aa13.85□□□□□ -0.19
SCARB2-223ENST00000640640 RPL36ALQ969Q0 106 aaKnown RBP13.85□□□□□ -0.19
SCARB2-223ENST00000640640 CHCHD5Q9BSY4 110 aa13.85□□□□□ -0.19
SCARB2-223ENST00000640640 ABCA2Q9BZC7 2435 aa13.85□□□□□ -0.19
SCARB2-223ENST00000640640 INSP01308 110 aa13.85□□□□□ -0.19
SCARB2-223ENST00000640640 MORN5Q5VZ52 161 aa13.85□□□□□ -0.19
SCARB2-223ENST00000640640 PATE2Q6UY27 113 aa13.85□□□□□ -0.19
SCARB2-223ENST00000640640 C11orf1Q9H5F2 150 aa13.85□□□□□ -0.19
SCARB2-223ENST00000640640 Q6ZWC4 215 aa13.84□□□□□ -0.19
SCARB2-223ENST00000640640 CEP350Q5VT06 3117 aa13.84□□□□□ -0.19
SCARB2-223ENST00000640640 IGHV7-81A0A0B4J1V7 117 aa13.84□□□□□ -0.19
SCARB2-223ENST00000640640 I3L2K1 104 aa13.84□□□□□ -0.19
SCARB2-223ENST00000640640 LTAP01374 205 aa13.84□□□□□ -0.19
SCARB2-223ENST00000640640 C20orf144Q9BQM9 153 aa13.84□□□□□ -0.19
SCARB2-223ENST00000640640 ANKRD11Q6UB99 2663 aaPredicted RBP13.84□□□□□ -0.19
SCARB2-223ENST00000640640 HIVEP3Q5T1R4 2406 aa13.84□□□□□ -0.19
SCARB2-223ENST00000640640 C2CD3Q4AC94 2353 aa13.84□□□□□ -0.19
SCARB2-223ENST00000640640 TRAV2A0A0B4J234 112 aa13.84□□□□□ -0.19
SCARB2-223ENST00000640640 FBXL19-AS1Q494R0 122 aa13.84□□□□□ -0.19
SCARB2-223ENST00000640640 DNAH12Q6ZR08 3092 aa13.84□□□□□ -0.19
SCARB2-223ENST00000640640 MRPL51Q4U2R6 128 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms