RNA–Protein interactions for RNA: ENST00000640242.1

PAX6-266, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-266ENST00000640242 LOC100996750A0A140TA64 210 aa8.83□□□□□ -1
PAX6-266ENST00000640242 ZNF705FA8MVS1 300 aaPredicted RBP8.83□□□□□ -1
PAX6-266ENST00000640242 LY6G6DO95868 133 aa8.83□□□□□ -1
PAX6-266ENST00000640242 HOXD3P31249 432 aaPredicted RBP8.83□□□□□ -1
PAX6-266ENST00000640242 RPS20P60866 119 aaKnown RBP8.83□□□□□ -1
PAX6-266ENST00000640242 SMUG1Q53HV7 270 aa8.83□□□□□ -1
PAX6-266ENST00000640242 KHDC1LQ5JSQ8 128 aa8.83□□□□□ -1
PAX6-266ENST00000640242 Q6AWC8 147 aa8.83□□□□□ -1
PAX6-266ENST00000640242 C9orf47Q6ZRZ4 202 aa8.83□□□□□ -1
PAX6-266ENST00000640242 TCF24Q7RTU0 167 aa8.83□□□□□ -1
PAX6-266ENST00000640242 ZNF738Q8NE65 137 aa8.83□□□□□ -1
PAX6-266ENST00000640242 OR10J6PQ8NGY7 276 aa8.83□□□□□ -1
PAX6-266ENST00000640242 ZC2HC1AQ96GY0 325 aa8.83□□□□□ -1
PAX6-266ENST00000640242 ASCL2Q99929 193 aa8.83□□□□□ -1
PAX6-266ENST00000640242 GNB1LQ9BYB4 327 aa8.83□□□□□ -1
PAX6-266ENST00000640242 KRTAP4-6Q9BYQ5 205 aa8.83□□□□□ -1
PAX6-266ENST00000640242 ESM1Q9NQ30 184 aa8.83□□□□□ -1
PAX6-266ENST00000640242 TMEM213A2RRL7 107 aa8.82□□□□□ -1
PAX6-266ENST00000640242 C5orf52A6NGY3 159 aa8.82□□□□□ -1
PAX6-266ENST00000640242 HIST1H2BKO60814 126 aa8.82□□□□□ -1
PAX6-266ENST00000640242 NDUFA7O95182 113 aa8.82□□□□□ -1
PAX6-266ENST00000640242 HLA-DQA1P01909 254 aa8.82□□□□□ -1
PAX6-266ENST00000640242 HIST1H2BJP06899 126 aa8.82□□□□□ -1
PAX6-266ENST00000640242 TRGC1P0CF51 173 aa8.82□□□□□ -1
PAX6-266ENST00000640242 HIST1H2BOP23527 126 aa8.82□□□□□ -1
PAX6-266ENST00000640242 HLA-DMBP28068 263 aa8.82□□□□□ -1
PAX6-266ENST00000640242 HIST1H2BBP33778 126 aa8.82□□□□□ -1
PAX6-266ENST00000640242 ZNF138P52744 262 aa8.82□□□□□ -1
PAX6-266ENST00000640242 TCL1AP56279 114 aa8.82□□□□□ -1
PAX6-266ENST00000640242 SYNJ2BPP57105 145 aa8.82□□□□□ -1
PAX6-266ENST00000640242 HIST1H2BDP58876 126 aa8.82□□□□□ -1
PAX6-266ENST00000640242 HIST1H2BCP62807 126 aa8.82□□□□□ -1
PAX6-266ENST00000640242 PAFAH1B2P68402 229 aa8.82□□□□□ -1
PAX6-266ENST00000640242 SRSF2Q01130 221 aaKnown RBP8.82□□□□□ -1
PAX6-266ENST00000640242 KLF5Q13887 457 aaPredicted RBP8.82□□□□□ -1
PAX6-266ENST00000640242 HIST2H2BEQ16778 126 aa8.82□□□□□ -1
PAX6-266ENST00000640242 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.82□□□□□ -1
PAX6-266ENST00000640242 IGFL4Q6B9Z1 124 aa8.82□□□□□ -1
PAX6-266ENST00000640242 RBPMS2Q6ZRY4 209 aaKnown RBP8.82□□□□□ -1
PAX6-266ENST00000640242 RNF182Q8N6D2 247 aa8.82□□□□□ -1
PAX6-266ENST00000640242 OR2D3Q8NGH3 330 aa8.82□□□□□ -1
PAX6-266ENST00000640242 WIPF2Q8TF74 440 aaPredicted RBP8.82□□□□□ -1
PAX6-266ENST00000640242 FRZBQ92765 325 aa8.82□□□□□ -1
PAX6-266ENST00000640242 HIST1H2BHQ93079 126 aa8.82□□□□□ -1
PAX6-266ENST00000640242 BORCS7Q96B45 105 aa8.82□□□□□ -1
PAX6-266ENST00000640242 LINC00477Q96M19 166 aa8.82□□□□□ -1
PAX6-266ENST00000640242 HIST1H2BNQ99877 126 aa8.82□□□□□ -1
PAX6-266ENST00000640242 HIST1H2BMQ99879 126 aa8.82□□□□□ -1
PAX6-266ENST00000640242 VGLL1Q99990 258 aa8.82□□□□□ -1
PAX6-266ENST00000640242 MXRA5Q9NR99 2828 aa8.81□□□□□ -1
PAX6-266ENST00000640242 HIGD1CA8MV81 97 aa8.81□□□□□ -1
PAX6-266ENST00000640242 UBE2CO00762 179 aa8.81□□□□□ -1
PAX6-266ENST00000640242 SOCS3O14543 225 aa8.81□□□□□ -1
PAX6-266ENST00000640242 S100A8P05109 93 aa8.81□□□□□ -1
PAX6-266ENST00000640242 NDUFA6P56556 154 aa8.81□□□□□ -1
PAX6-266ENST00000640242 SNRPEP62304 92 aaKnown RBP8.81□□□□□ -1
PAX6-266ENST00000640242 FABP9Q0Z7S8 132 aa8.81□□□□□ -1
PAX6-266ENST00000640242 LINC00322Q6ZN03 302 aaPredicted RBP8.81□□□□□ -1
PAX6-266ENST00000640242 KLHL30-AS1Q8NEE0 82 aa8.81□□□□□ -1
PAX6-266ENST00000640242 NUP35Q8NFH5 326 aa8.81□□□□□ -1
PAX6-266ENST00000640242 OR1N2Q8NGR9 330 aa8.81□□□□□ -1
PAX6-266ENST00000640242 C8orf49Q96NF6 230 aa8.81□□□□□ -1
PAX6-266ENST00000640242 NEU1Q99519 415 aa8.81□□□□□ -1
PAX6-266ENST00000640242 MYO9AB2RTY4 2548 aa8.81□□□□□ -1
PAX6-266ENST00000640242 SONP18583 2426 aaKnown RBP8.8□□□□□ -1
PAX6-266ENST00000640242 TRBV7-9A0A0J9YWB2 115 aa8.8□□□□□ -1
PAX6-266ENST00000640242 A0A1B0GW15 77 aa8.8□□□□□ -1
PAX6-266ENST00000640242 TMEM189A5PLL7 270 aa8.8□□□□□ -1
PAX6-266ENST00000640242 C2orf70A6NJV1 201 aa8.8□□□□□ -1
PAX6-266ENST00000640242 FABP5P3A8MUU1 101 aa8.8□□□□□ -1
PAX6-266ENST00000640242 SNURFLB1AK76 121 aa8.8□□□□□ -1
PAX6-266ENST00000640242 PHOX2AO14813 284 aa8.8□□□□□ -1
PAX6-266ENST00000640242 CA1P00915 261 aaPredicted RBP8.8□□□□□ -1
PAX6-266ENST00000640242 CBLN1P23435 193 aa8.8□□□□□ -1
PAX6-266ENST00000640242 FOXA3P55318 350 aaPredicted RBP8.8□□□□□ -1
PAX6-266ENST00000640242 SNRPD3P62318 126 aaKnown RBP8.8□□□□□ -1
PAX6-266ENST00000640242 OR11H1Q8NG94 326 aa8.8□□□□□ -1
PAX6-266ENST00000640242 PRAC2D3DTV9 90 aa8.79□□□□□ -1
PAX6-266ENST00000640242 SH2D1AO60880 128 aa8.79□□□□□ -1
PAX6-266ENST00000640242 PF4P02776 101 aa8.79□□□□□ -1
PAX6-266ENST00000640242 RAB4BP61018 213 aa8.79□□□□□ -1
PAX6-266ENST00000640242 HBBP68871 147 aa8.79□□□□□ -1
PAX6-266ENST00000640242 HIST1H1AQ02539 215 aaPredicted RBP8.79□□□□□ -1
PAX6-266ENST00000640242 MRPL54Q6P161 138 aaKnown RBP8.79□□□□□ -1
PAX6-266ENST00000640242 LINC01006Q8NI28 216 aa8.79□□□□□ -1
PAX6-266ENST00000640242 AGPAT4-IT1Q9H0P7 198 aa8.79□□□□□ -1
PAX6-266ENST00000640242 TSSC4Q9Y5U2 329 aaPredicted RBP8.79□□□□□ -1
PAX6-266ENST00000640242 CSMD1Q96PZ7 3565 aa8.79□□□□□ -1
PAX6-266ENST00000640242 HIVEP2P31629 2446 aa8.79□□□□□ -1
PAX6-266ENST00000640242 ACANP16112 2415 aa8.78□□□□□ -1
PAX6-266ENST00000640242 TRAV2A0A0B4J234 112 aa8.78□□□□□ -1
PAX6-266ENST00000640242 TCF21O43680 179 aa8.78□□□□□ -1
PAX6-266ENST00000640242 SPINK4O60575 86 aa8.78□□□□□ -1
PAX6-266ENST00000640242 HOXA5P20719 270 aa8.78□□□□□ -1
PAX6-266ENST00000640242 ERCC8Q13216 396 aa8.78□□□□□ -1
PAX6-266ENST00000640242 RIGQ13278 110 aa8.78□□□□□ -1
PAX6-266ENST00000640242 TCTEX1D4Q5JR98 221 aa8.78□□□□□ -1
PAX6-266ENST00000640242 OR9G4Q8NGQ1 327 aa8.78□□□□□ -1
PAX6-266ENST00000640242 Q8TAT8 98 aa8.78□□□□□ -1
PAX6-266ENST00000640242 SMR3AQ99954 134 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms