RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 HIST2H2BCQ6DN03 193 aa9.41□□□□□ -0.9
PAX6-261ENST00000639943 OR4B1Q8NGF8 309 aa9.41□□□□□ -0.9
PAX6-261ENST00000639943 OR4X2Q8NGF9 303 aa9.41□□□□□ -0.9
PAX6-261ENST00000639943 SLC50A1Q9BRV3 221 aa9.41□□□□□ -0.9
PAX6-261ENST00000639943 ZANQ9Y493 2812 aa9.41□□□□□ -0.9
PAX6-261ENST00000639943 IGHV3-66A0A0C4DH42 116 aa9.41□□□□□ -0.9
PAX6-261ENST00000639943 SNURFLB1AK76 121 aa9.41□□□□□ -0.9
PAX6-261ENST00000639943 SPINK4O60575 86 aa9.41□□□□□ -0.9
PAX6-261ENST00000639943 TRBV12-3P01733 135 aa9.41□□□□□ -0.9
PAX6-261ENST00000639943 IGHV3-11P01762 117 aa9.41□□□□□ -0.9
PAX6-261ENST00000639943 APOHP02749 345 aaPredicted RBP9.41□□□□□ -0.9
PAX6-261ENST00000639943 GFI1BQ5VTD9 330 aa9.41□□□□□ -0.9
PAX6-261ENST00000639943 RASL11AQ6T310 242 aa9.41□□□□□ -0.9
PAX6-261ENST00000639943 TEX29Q8N6K0 151 aa9.41□□□□□ -0.9
PAX6-261ENST00000639943 NUP35Q8NFH5 326 aa9.41□□□□□ -0.9
PAX6-261ENST00000639943 IFITM10A6NMD0 228 aa9.4□□□□□ -0.9
PAX6-261ENST00000639943 NPIPB6E9PJ23 425 aa9.4□□□□□ -0.9
PAX6-261ENST00000639943 CHEK1O14757 476 aa9.4□□□□□ -0.9
PAX6-261ENST00000639943 SLC35B1P78383 322 aa9.4□□□□□ -0.9
PAX6-261ENST00000639943 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.4□□□□□ -0.9
PAX6-261ENST00000639943 PRO1933Q9H354 126 aa9.4□□□□□ -0.9
PAX6-261ENST00000639943 MRPL54Q6P161 138 aaKnown RBP9.4□□□□□ -0.9
PAX6-261ENST00000639943 ZC2HC1AQ96GY0 325 aa9.4□□□□□ -0.9
PAX6-261ENST00000639943 GFRA4Q9GZZ7 299 aa9.4□□□□□ -0.9
PAX6-261ENST00000639943 HIGD1CA8MV81 97 aa9.39□□□□□ -0.91
PAX6-261ENST00000639943 FRMD6-AS1P0C7T7 363 aa9.39□□□□□ -0.91
PAX6-261ENST00000639943 PSMB8P28062 276 aa9.39□□□□□ -0.91
PAX6-261ENST00000639943 LCN12Q6JVE5 192 aa9.39□□□□□ -0.91
PAX6-261ENST00000639943 TMEM136Q6ZRR5 245 aa9.39□□□□□ -0.91
PAX6-261ENST00000639943 WIPF2Q8TF74 440 aaPredicted RBP9.39□□□□□ -0.91
PAX6-261ENST00000639943 VCX2Q9H322 139 aa9.39□□□□□ -0.91
PAX6-261ENST00000639943 GCN1Q92616 2671 aaKnown RBP9.39□□□□□ -0.91
PAX6-261ENST00000639943 IGHV3OR16-13A0A075B7E8 117 aa9.39□□□□□ -0.91
PAX6-261ENST00000639943 IGHV3-49A0A0A0MS15 119 aa9.39□□□□□ -0.91
PAX6-261ENST00000639943 IGHV3-74A0A0B4J1X5 117 aa9.39□□□□□ -0.91
PAX6-261ENST00000639943 FAM231BA6NCW3 169 aa9.39□□□□□ -0.91
PAX6-261ENST00000639943 HOXA3O43365 443 aaPredicted RBP9.39□□□□□ -0.91
PAX6-261ENST00000639943 HLA-DQA1P01909 254 aa9.39□□□□□ -0.91
PAX6-261ENST00000639943 LCNL1Q6ZST4 164 aa9.39□□□□□ -0.91
PAX6-261ENST00000639943 ATP5L2Q7Z4Y8 100 aa9.39□□□□□ -0.91
PAX6-261ENST00000639943 WFDC11Q8NEX6 87 aa9.39□□□□□ -0.91
PAX6-261ENST00000639943 NPFFR1Q9GZQ6 430 aa9.39□□□□□ -0.91
PAX6-261ENST00000639943 IGKV2-40A0A087WW87 121 aaPredicted RBP9.38□□□□□ -0.91
PAX6-261ENST00000639943 C20orf202A1L168 122 aa9.38□□□□□ -0.91
PAX6-261ENST00000639943 IGKV2D-40P01614 121 aaPredicted RBP9.38□□□□□ -0.91
PAX6-261ENST00000639943 CT45A10P0DMU9 189 aa9.38□□□□□ -0.91
PAX6-261ENST00000639943 PDZD11Q5EBL8 140 aa9.38□□□□□ -0.91
PAX6-261ENST00000639943 IGFL4Q6B9Z1 124 aa9.38□□□□□ -0.91
PAX6-261ENST00000639943 UNQ9165/PRO28630Q6UXU0 137 aa9.38□□□□□ -0.91
PAX6-261ENST00000639943 GLMPQ8WWB7 406 aa9.38□□□□□ -0.91
PAX6-261ENST00000639943 ZMAT4Q9H898 229 aa9.38□□□□□ -0.91
PAX6-261ENST00000639943 A0A1W2PS18 150 aa9.38□□□□□ -0.91
PAX6-261ENST00000639943 HLA-DMBP28068 263 aa9.38□□□□□ -0.91
PAX6-261ENST00000639943 COX8CQ7Z4L0 72 aa9.38□□□□□ -0.91
PAX6-261ENST00000639943 TNFRSF18Q9Y5U5 241 aa9.38□□□□□ -0.91
PAX6-261ENST00000639943 NBPF19A0A087WUL8 3843 aa9.38□□□□□ -0.91
PAX6-261ENST00000639943 PTTG1IPP53801 180 aa9.37□□□□□ -0.91
PAX6-261ENST00000639943 Q71RC1 249 aaPredicted RBP9.37□□□□□ -0.91
PAX6-261ENST00000639943 MRPL53Q96EL3 112 aaKnown RBP9.37□□□□□ -0.91
PAX6-261ENST00000639943 TEX15Q9BXT5 2789 aa9.37□□□□□ -0.91
PAX6-261ENST00000639943 RBAKDNA6NC62 111 aa9.37□□□□□ -0.91
PAX6-261ENST00000639943 ZNF705FA8MVS1 300 aaPredicted RBP9.37□□□□□ -0.91
PAX6-261ENST00000639943 PRB4P10163 310 aaPredicted RBP9.37□□□□□ -0.91
PAX6-261ENST00000639943 RBPMS2Q6ZRY4 209 aaKnown RBP9.37□□□□□ -0.91
PAX6-261ENST00000639943 TCF24Q7RTU0 167 aa9.37□□□□□ -0.91
PAX6-261ENST00000639943 C8orf49Q96NF6 230 aa9.37□□□□□ -0.91
PAX6-261ENST00000639943 FAM110AQ9BQ89 295 aa9.37□□□□□ -0.91
PAX6-261ENST00000639943 ALKBH7Q9BT30 221 aaPredicted RBP9.37□□□□□ -0.91
PAX6-261ENST00000639943 TPPP3Q9BW30 176 aa9.37□□□□□ -0.91
PAX6-261ENST00000639943 ZNF702PQ9H963 129 aa9.37□□□□□ -0.91
PAX6-261ENST00000639943 SCGB1A1P11684 91 aa9.36□□□□□ -0.91
PAX6-261ENST00000639943 FABP4P15090 132 aa9.36□□□□□ -0.91
PAX6-261ENST00000639943 CRISP2P16562 243 aa9.36□□□□□ -0.91
PAX6-261ENST00000639943 CDPF1Q6NVV7 123 aa9.36□□□□□ -0.91
PAX6-261ENST00000639943 C8orf86Q6ZUL3 223 aa9.36□□□□□ -0.91
PAX6-261ENST00000639943 PRR25Q96S07 402 aa9.36□□□□□ -0.91
PAX6-261ENST00000639943 ASCL2Q99929 193 aa9.36□□□□□ -0.91
PAX6-261ENST00000639943 VGLL1Q99990 258 aa9.36□□□□□ -0.91
PAX6-261ENST00000639943 FAM106AQ4KMX7 169 aa9.36□□□□□ -0.91
PAX6-261ENST00000639943 OR10D4PQ8NGN7 298 aa9.36□□□□□ -0.91
PAX6-261ENST00000639943 GTSF1Q8WW33 167 aa9.36□□□□□ -0.91
PAX6-261ENST00000639943 HIST1H2BLQ99880 126 aa9.36□□□□□ -0.91
PAX6-261ENST00000639943 NDFIP1Q9BT67 221 aa9.36□□□□□ -0.91
PAX6-261ENST00000639943 TRAV8-2A0A0B4J237 113 aa9.35□□□□□ -0.91
PAX6-261ENST00000639943 A0A1B0GW15 77 aa9.35□□□□□ -0.91
PAX6-261ENST00000639943 APCSP02743 223 aa9.35□□□□□ -0.91
PAX6-261ENST00000639943 ELANEP08246 267 aa9.35□□□□□ -0.91
PAX6-261ENST00000639943 CRIP1P50238 77 aa9.35□□□□□ -0.91
PAX6-261ENST00000639943 FOXE3Q13461 319 aa9.35□□□□□ -0.91
PAX6-261ENST00000639943 FAM162BQ5T6X4 162 aa9.35□□□□□ -0.91
PAX6-261ENST00000639943 LINC00528Q8N1L1 170 aa9.35□□□□□ -0.91
PAX6-261ENST00000639943 RNF182Q8N6D2 247 aa9.35□□□□□ -0.91
PAX6-261ENST00000639943 A0A1B0GXF2 115 aa9.35□□□□□ -0.91
PAX6-261ENST00000639943 FOXA3P55318 350 aaPredicted RBP9.35□□□□□ -0.91
PAX6-261ENST00000639943 SIGLECL1Q8N7X8 197 aa9.35□□□□□ -0.91
PAX6-261ENST00000639943 PGLYRP4Q96LB8 373 aa9.35□□□□□ -0.91
PAX6-261ENST00000639943 C16orf92Q96LL3 132 aa9.35□□□□□ -0.91
PAX6-261ENST00000639943 FOXC2Q99958 501 aa9.35□□□□□ -0.91
PAX6-261ENST00000639943 HELZ2Q9BYK8 2649 aaKnown RBP9.35□□□□□ -0.91
PAX6-261ENST00000639943 ITPR3Q14573 2671 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms