RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 C9orf66Q5T8R8 295 aa7.78□□□□□ -1.16
LINC00598-216ENST00000638163 EBLN2Q6P2I7 272 aa7.78□□□□□ -1.16
LINC00598-216ENST00000638163 KCNIP4Q6PIL6 250 aa7.78□□□□□ -1.16
LINC00598-216ENST00000638163 C12orf54Q6X4T0 127 aa7.78□□□□□ -1.16
LINC00598-216ENST00000638163 FOXI2Q6ZQN5 318 aa7.78□□□□□ -1.16
LINC00598-216ENST00000638163 C3orf56Q8N813 242 aa7.78□□□□□ -1.16
LINC00598-216ENST00000638163 LINC00482Q8N8I6 264 aa7.78□□□□□ -1.16
LINC00598-216ENST00000638163 DAZAP1Q96EP5 407 aaKnown RBP7.78□□□□□ -1.16
LINC00598-216ENST00000638163 MLST8Q9BVC4 326 aa7.78□□□□□ -1.16
LINC00598-216ENST00000638163 RPS10P5Q9NQ39 176 aa7.78□□□□□ -1.16
LINC00598-216ENST00000638163 FAM231BA6NCW3 169 aa7.77□□□□□ -1.17
LINC00598-216ENST00000638163 H7BYZ3 331 aa7.77□□□□□ -1.17
LINC00598-216ENST00000638163 SAP30O75446 220 aa7.77□□□□□ -1.17
LINC00598-216ENST00000638163 IGLV1-51P01701 117 aa7.77□□□□□ -1.17
LINC00598-216ENST00000638163 IGLV2-11P01706 119 aa7.77□□□□□ -1.17
LINC00598-216ENST00000638163 TSPOP30536 169 aa7.77□□□□□ -1.17
LINC00598-216ENST00000638163 ERVFC1-1P60608 527 aa7.77□□□□□ -1.17
LINC00598-216ENST00000638163 SRSF2Q01130 221 aaKnown RBP7.77□□□□□ -1.17
LINC00598-216ENST00000638163 KRTAP24-1Q3LI83 254 aa7.77□□□□□ -1.17
LINC00598-216ENST00000638163 SMUG1Q53HV7 270 aa7.77□□□□□ -1.17
LINC00598-216ENST00000638163 IBA57Q5T440 356 aaKnown RBP7.77□□□□□ -1.17
LINC00598-216ENST00000638163 TMEM61Q8N0U2 210 aa7.77□□□□□ -1.17
LINC00598-216ENST00000638163 OCC1Q8TAD7 63 aa7.77□□□□□ -1.17
LINC00598-216ENST00000638163 CLUHP3Q96NS8 147 aa7.77□□□□□ -1.17
LINC00598-216ENST00000638163 PRR25Q96S07 402 aa7.77□□□□□ -1.17
LINC00598-216ENST00000638163 ASCL2Q99929 193 aa7.77□□□□□ -1.17
LINC00598-216ENST00000638163 SAV1Q9H4B6 383 aaPredicted RBP7.77□□□□□ -1.17
LINC00598-216ENST00000638163 SNRPCP09234 159 aaKnown RBP7.76□□□□□ -1.17
LINC00598-216ENST00000638163 MGST1P10620 155 aaKnown RBP7.76□□□□□ -1.17
LINC00598-216ENST00000638163 CD300EQ496F6 205 aaPredicted RBP7.76□□□□□ -1.17
LINC00598-216ENST00000638163 FAM162BQ5T6X4 162 aa7.76□□□□□ -1.17
LINC00598-216ENST00000638163 Q6AWC8 147 aa7.76□□□□□ -1.17
LINC00598-216ENST00000638163 ADAMTSL5Q6ZMM2 481 aa7.76□□□□□ -1.17
LINC00598-216ENST00000638163 PRNTQ86SH4 94 aa7.76□□□□□ -1.17
LINC00598-216ENST00000638163 GBGT1Q8N5D6 347 aa7.76□□□□□ -1.17
LINC00598-216ENST00000638163 OR8A1Q8NGG7 326 aa7.76□□□□□ -1.17
LINC00598-216ENST00000638163 OR10G8Q8NGN5 311 aa7.76□□□□□ -1.17
LINC00598-216ENST00000638163 DUX3Q96PT4 197 aa7.76□□□□□ -1.17
LINC00598-216ENST00000638163 COL6A5A8TX70 2615 aa7.76□□□□□ -1.17
LINC00598-216ENST00000638163 TRAV34A0A0B4J273 112 aa7.75□□□□□ -1.17
LINC00598-216ENST00000638163 WIPF1O43516 503 aa7.75□□□□□ -1.17
LINC00598-216ENST00000638163 IGLV2-8P01709 118 aa7.75□□□□□ -1.17
LINC00598-216ENST00000638163 P01737 135 aa7.75□□□□□ -1.17
LINC00598-216ENST00000638163 AMBPP02760 352 aa7.75□□□□□ -1.17
LINC00598-216ENST00000638163 LEPP41159 167 aa7.75□□□□□ -1.17
LINC00598-216ENST00000638163 KRTAP10-3P60369 221 aa7.75□□□□□ -1.17
LINC00598-216ENST00000638163 RPS20P60866 119 aaKnown RBP7.75□□□□□ -1.17
LINC00598-216ENST00000638163 RNF212Q495C1 297 aa7.75□□□□□ -1.17
LINC00598-216ENST00000638163 PSMG4Q5JS54 123 aa7.75□□□□□ -1.17
LINC00598-216ENST00000638163 RNF182Q8N6D2 247 aa7.75□□□□□ -1.17
LINC00598-216ENST00000638163 WFDC9Q8NEX5 89 aa7.75□□□□□ -1.17
LINC00598-216ENST00000638163 GFRA4Q9GZZ7 299 aa7.75□□□□□ -1.17
LINC00598-216ENST00000638163 IGKV2-40A0A087WW87 121 aaPredicted RBP7.74□□□□□ -1.17
LINC00598-216ENST00000638163 A0A0J9YX75 114 aa7.74□□□□□ -1.17
LINC00598-216ENST00000638163 A8MWL6 223 aa7.74□□□□□ -1.17
LINC00598-216ENST00000638163 IGKV2D-40P01614 121 aaPredicted RBP7.74□□□□□ -1.17
LINC00598-216ENST00000638163 CRISP2P16562 243 aa7.74□□□□□ -1.17
LINC00598-216ENST00000638163 CD33P20138 364 aa7.74□□□□□ -1.17
LINC00598-216ENST00000638163 HIST1H1AQ02539 215 aaPredicted RBP7.74□□□□□ -1.17
LINC00598-216ENST00000638163 COX19Q49B96 90 aa7.74□□□□□ -1.17
LINC00598-216ENST00000638163 SPATA3Q8NHX4 192 aa7.74□□□□□ -1.17
LINC00598-216ENST00000638163 LINC00479Q96M42 142 aa7.74□□□□□ -1.17
LINC00598-216ENST00000638163 IGKV3-7A0A075B6H7 116 aa7.73□□□□□ -1.17
LINC00598-216ENST00000638163 TRAV8-1A0A0A6YYK1 113 aa7.73□□□□□ -1.17
LINC00598-216ENST00000638163 FABP5P3A8MUU1 101 aa7.73□□□□□ -1.17
LINC00598-216ENST00000638163 OR11H12B2RN74 326 aa7.73□□□□□ -1.17
LINC00598-216ENST00000638163 K7EN84 100 aa7.73□□□□□ -1.17
LINC00598-216ENST00000638163 GATCO43716 136 aaKnown RBP7.73□□□□□ -1.17
LINC00598-216ENST00000638163 PFN1P07737 140 aaKnown RBP7.73□□□□□ -1.17
LINC00598-216ENST00000638163 CXCL1P09341 107 aa7.73□□□□□ -1.17
LINC00598-216ENST00000638163 ZNF688P0C7X2 276 aa7.73□□□□□ -1.17
LINC00598-216ENST00000638163 HLA-DRB4P13762 266 aa7.73□□□□□ -1.17
LINC00598-216ENST00000638163 NUTF2P61970 127 aaKnown RBP7.73□□□□□ -1.17
LINC00598-216ENST00000638163 APRG1Q8IVJ8 170 aa7.73□□□□□ -1.17
LINC00598-216ENST00000638163 C20orf144Q9BQM9 153 aa7.73□□□□□ -1.17
LINC00598-216ENST00000638163 AGPAT4-IT1Q9H0P7 198 aa7.73□□□□□ -1.17
LINC00598-216ENST00000638163 RPP21Q9H633 154 aaKnown RBP7.73□□□□□ -1.17
LINC00598-216ENST00000638163 ZNF256Q9Y2P7 627 aaPredicted RBP7.73□□□□□ -1.17
LINC00598-216ENST00000638163 HLA-DRB4X5D2U9 266 aa7.73□□□□□ -1.17
LINC00598-216ENST00000638163 TRAV21A0A0B4J279 112 aa7.72□□□□□ -1.17
LINC00598-216ENST00000638163 C19orf71A6NCJ1 209 aa7.72□□□□□ -1.17
LINC00598-216ENST00000638163 A8MTW9 85 aa7.72□□□□□ -1.17
LINC00598-216ENST00000638163 ZNF705GA8MUZ8 300 aaPredicted RBP7.72□□□□□ -1.17
LINC00598-216ENST00000638163 ZNF705FA8MVS1 300 aaPredicted RBP7.72□□□□□ -1.17
LINC00598-216ENST00000638163 TFPI2P48307 235 aa7.72□□□□□ -1.17
LINC00598-216ENST00000638163 IGFL4Q6B9Z1 124 aa7.72□□□□□ -1.17
LINC00598-216ENST00000638163 RASL11AQ6T310 242 aa7.72□□□□□ -1.17
LINC00598-216ENST00000638163 GTSCR1Q86UQ5 136 aa7.72□□□□□ -1.17
LINC00598-216ENST00000638163 WFDC3Q8IUB2 231 aa7.72□□□□□ -1.17
LINC00598-216ENST00000638163 TSKUQ8WUA8 353 aa7.72□□□□□ -1.17
LINC00598-216ENST00000638163 C20orf173Q96LM9 149 aa7.72□□□□□ -1.17
LINC00598-216ENST00000638163 VGLL1Q99990 258 aa7.72□□□□□ -1.17
LINC00598-216ENST00000638163 IL36BQ9NZH7 164 aa7.72□□□□□ -1.17
LINC00598-216ENST00000638163 TRBV24-1A0A075B6N3 115 aa7.71□□□□□ -1.18
LINC00598-216ENST00000638163 A0A1W2PPQ1 181 aa7.71□□□□□ -1.18
LINC00598-216ENST00000638163 PGPEP1LA6NFU8 196 aa7.71□□□□□ -1.18
LINC00598-216ENST00000638163 S100A8P05109 93 aa7.71□□□□□ -1.18
LINC00598-216ENST00000638163 HLA-DMBP28068 263 aa7.71□□□□□ -1.18
LINC00598-216ENST00000638163 BEAN1Q3B7T3 259 aa7.71□□□□□ -1.18
LINC00598-216ENST00000638163 PRR27Q6MZM9 219 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms