RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 TCRAP04437 139 aa11.69□□□□□ -0.54
CLN6-216ENST00000636876 NHLRC4P0CG21 123 aaPredicted RBP11.69□□□□□ -0.54
CLN6-216ENST00000636876 CT45A10P0DMU9 189 aa11.69□□□□□ -0.54
CLN6-216ENST00000636876 PMS2P11Q13670 270 aa11.69□□□□□ -0.54
CLN6-216ENST00000636876 DEFB135Q30KP9 77 aa11.69□□□□□ -0.54
CLN6-216ENST00000636876 TMEM78Q5T7P6 136 aa11.69□□□□□ -0.54
CLN6-216ENST00000636876 ODF3Q96PU9 254 aa11.69□□□□□ -0.54
CLN6-216ENST00000636876 SPATA25Q9BR10 227 aa11.69□□□□□ -0.54
CLN6-216ENST00000636876 C1QTNF4Q9BXJ3 329 aa11.69□□□□□ -0.54
CLN6-216ENST00000636876 XCL2Q9UBD3 114 aa11.69□□□□□ -0.54
CLN6-216ENST00000636876 HUWE1Q7Z6Z7 4374 aaKnown RBP11.68□□□□□ -0.54
CLN6-216ENST00000636876 SERTM2A0A1B0GWG4 89 aa11.68□□□□□ -0.54
CLN6-216ENST00000636876 M0R2Z0 102 aa11.68□□□□□ -0.54
CLN6-216ENST00000636876 ATP5G3P48201 142 aa11.68□□□□□ -0.54
CLN6-216ENST00000636876 SPINK13Q1W4C9 94 aa11.68□□□□□ -0.54
CLN6-216ENST00000636876 CCDC28AQ8IWP9 274 aa11.68□□□□□ -0.54
CLN6-216ENST00000636876 LYPD6BQ8NI32 183 aa11.68□□□□□ -0.54
CLN6-216ENST00000636876 ATG101Q9BSB4 218 aa11.68□□□□□ -0.54
CLN6-216ENST00000636876 RETNQ9HD89 108 aa11.68□□□□□ -0.54
CLN6-216ENST00000636876 PEX7O00628 323 aa11.67□□□□□ -0.54
CLN6-216ENST00000636876 IFNA1P01562 189 aa11.67□□□□□ -0.54
CLN6-216ENST00000636876 TSPOP30536 169 aa11.67□□□□□ -0.54
CLN6-216ENST00000636876 ZNF138P52744 262 aa11.67□□□□□ -0.54
CLN6-216ENST00000636876 CYB561D1Q8N8Q1 229 aa11.67□□□□□ -0.54
CLN6-216ENST00000636876 RNF183Q96D59 192 aa11.67□□□□□ -0.54
CLN6-216ENST00000636876 TCEAL7Q9BRU2 100 aa11.67□□□□□ -0.54
CLN6-216ENST00000636876 ZMAT4Q9H898 229 aa11.67□□□□□ -0.54
CLN6-216ENST00000636876 ZNF492Q9P255 531 aa11.67□□□□□ -0.54
CLN6-216ENST00000636876 TP53TG1Q9Y2A0 90 aa11.67□□□□□ -0.54
CLN6-216ENST00000636876 STAB2Q8WWQ8 2551 aa11.67□□□□□ -0.54
CLN6-216ENST00000636876 C11orf94C9JXX5 98 aa11.66□□□□□ -0.54
CLN6-216ENST00000636876 K7EQM0 130 aa11.66□□□□□ -0.54
CLN6-216ENST00000636876 LEPP41159 167 aa11.66□□□□□ -0.54
CLN6-216ENST00000636876 CSNK1G2-AS1Q8NCQ2 148 aa11.66□□□□□ -0.54
CLN6-216ENST00000636876 Q8TAT8 98 aa11.66□□□□□ -0.54
CLN6-216ENST00000636876 HIST1H2BAQ96A08 127 aa11.66□□□□□ -0.54
CLN6-216ENST00000636876 FAM19A4Q96LR4 140 aa11.66□□□□□ -0.54
CLN6-216ENST00000636876 IGF2BP2-AS1Q96M15 143 aa11.66□□□□□ -0.54
CLN6-216ENST00000636876 RCHY1Q96PM5 261 aa11.66□□□□□ -0.54
CLN6-216ENST00000636876 OVOL2Q9BRP0 275 aa11.66□□□□□ -0.54
CLN6-216ENST00000636876 TRAV8-1A0A0A6YYK1 113 aa11.65□□□□□ -0.54
CLN6-216ENST00000636876 F6UZH7 168 aa11.65□□□□□ -0.54
CLN6-216ENST00000636876 CRXO43186 299 aaPredicted RBP11.65□□□□□ -0.54
CLN6-216ENST00000636876 SPRY2O43597 315 aa11.65□□□□□ -0.54
CLN6-216ENST00000636876 BCL2P10415 239 aa11.65□□□□□ -0.54
CLN6-216ENST00000636876 CRISP2P16562 243 aa11.65□□□□□ -0.54
CLN6-216ENST00000636876 CDKN1BP46527 198 aa11.65□□□□□ -0.54
CLN6-216ENST00000636876 TXNDC17Q9BRA2 123 aa11.65□□□□□ -0.54
CLN6-216ENST00000636876 LENEPQ9Y5L5 61 aa11.65□□□□□ -0.54
CLN6-216ENST00000636876 TRAV12-2A0A075B6T6 113 aa11.64□□□□□ -0.55
CLN6-216ENST00000636876 TRBV7-9A0A0J9YWB2 115 aa11.64□□□□□ -0.55
CLN6-216ENST00000636876 INSP01308 110 aa11.64□□□□□ -0.55
CLN6-216ENST00000636876 TAGLN2P37802 199 aaKnown RBP11.64□□□□□ -0.55
CLN6-216ENST00000636876 TMEM75Q8N9X5 138 aa11.64□□□□□ -0.55
CLN6-216ENST00000636876 PCNPQ8WW12 178 aaKnown RBP11.64□□□□□ -0.55
CLN6-216ENST00000636876 FBLL1A6NHQ2 334 aaKnown RBP11.63□□□□□ -0.55
CLN6-216ENST00000636876 IGLV2-11P01706 119 aa11.63□□□□□ -0.55
CLN6-216ENST00000636876 NMBP08949 121 aa11.63□□□□□ -0.55
CLN6-216ENST00000636876 IFITM2Q01629 132 aa11.63□□□□□ -0.55
CLN6-216ENST00000636876 MEF2BQ02080 365 aaPredicted RBP11.63□□□□□ -0.55
CLN6-216ENST00000636876 KIR3DS1Q14943 382 aa11.63□□□□□ -0.55
CLN6-216ENST00000636876 ZFAND2AQ8N6M9 145 aa11.63□□□□□ -0.55
CLN6-216ENST00000636876 SGK494Q96LW2 274 aa11.63□□□□□ -0.55
CLN6-216ENST00000636876 LINC00479Q96M42 142 aa11.63□□□□□ -0.55
CLN6-216ENST00000636876 VAX2Q9UIW0 290 aa11.63□□□□□ -0.55
CLN6-216ENST00000636876 TRAV34A0A0B4J273 112 aa11.62□□□□□ -0.55
CLN6-216ENST00000636876 LOC102723971A0A1B0GUV8 181 aa11.62□□□□□ -0.55
CLN6-216ENST00000636876 SCO2A0A1W2PP80 73 aa11.62□□□□□ -0.55
CLN6-216ENST00000636876 KLLNB2CW77 178 aa11.62□□□□□ -0.55
CLN6-216ENST00000636876 J3KRW8 73 aa11.62□□□□□ -0.55
CLN6-216ENST00000636876 FLI1Q01543 452 aaPredicted RBP11.62□□□□□ -0.55
CLN6-216ENST00000636876 GFI1BQ5VTD9 330 aa11.62□□□□□ -0.55
CLN6-216ENST00000636876 ZNF767PQ75MW2 155 aa11.62□□□□□ -0.55
CLN6-216ENST00000636876 C1orf158Q8N1D5 194 aa11.62□□□□□ -0.55
CLN6-216ENST00000636876 PSG8Q9UQ74 426 aa11.62□□□□□ -0.55
CLN6-216ENST00000636876 GOLT1BQ9Y3E0 138 aa11.62□□□□□ -0.55
CLN6-216ENST00000636876 AKR1C3P42330 323 aa11.61□□□□□ -0.55
CLN6-216ENST00000636876 ZNF705AQ6ZN79 300 aaPredicted RBP11.61□□□□□ -0.55
CLN6-216ENST00000636876 OR11H2Q8NH07 326 aa11.61□□□□□ -0.55
CLN6-216ENST00000636876 C2CD4CQ8TF44 421 aa11.61□□□□□ -0.55
CLN6-216ENST00000636876 C11orf52Q96A22 123 aa11.61□□□□□ -0.55
CLN6-216ENST00000636876 TVP23CQ96ET8 276 aa11.61□□□□□ -0.55
CLN6-216ENST00000636876 RARRES2Q99969 163 aa11.61□□□□□ -0.55
CLN6-216ENST00000636876 KLF12Q9Y4X4 402 aa11.61□□□□□ -0.55
CLN6-216ENST00000636876 KMT2CQ8NEZ4 4911 aaKnown RBP11.61□□□□□ -0.55
CLN6-216ENST00000636876 C7orf71A4D174 169 aa11.6□□□□□ -0.55
CLN6-216ENST00000636876 RBFOX3A6NFN3 312 aa11.6□□□□□ -0.55
CLN6-216ENST00000636876 PDE6DO43924 150 aa11.6□□□□□ -0.55
CLN6-216ENST00000636876 GPX1P07203 203 aa11.6□□□□□ -0.55
CLN6-216ENST00000636876 RBMY1A1P0DJD3 496 aaKnown RBP11.6□□□□□ -0.55
CLN6-216ENST00000636876 RBMY1CP0DJD4 496 aa11.6□□□□□ -0.55
CLN6-216ENST00000636876 BTN1A1Q13410 526 aa11.6□□□□□ -0.55
CLN6-216ENST00000636876 RBMY1FQ15415 496 aaKnown RBP11.6□□□□□ -0.55
CLN6-216ENST00000636876 ZNF506Q5JVG8 444 aa11.6□□□□□ -0.55
CLN6-216ENST00000636876 PRR9Q5T870 116 aa11.6□□□□□ -0.55
CLN6-216ENST00000636876 PRNTQ86SH4 94 aa11.6□□□□□ -0.55
CLN6-216ENST00000636876 Q86TA4 180 aa11.6□□□□□ -0.55
CLN6-216ENST00000636876 FMC1Q96HJ9 113 aa11.6□□□□□ -0.55
CLN6-216ENST00000636876 C20orf144Q9BQM9 153 aa11.6□□□□□ -0.55
CLN6-216ENST00000636876 NDFIP1Q9BT67 221 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms