RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 C9orf47Q6ZRZ4 202 aa5.96□□□□□ -1.46
PNKP-226ENST00000636840 PHYHIPLQ96FC7 376 aa5.96□□□□□ -1.46
PNKP-226ENST00000636840 NIPSNAP3BQ9BS92 247 aa5.96□□□□□ -1.46
PNKP-226ENST00000636840 AGPAT4-IT1Q9H0P7 198 aa5.96□□□□□ -1.46
PNKP-226ENST00000636840 KLK5Q9Y337 293 aaPredicted RBP5.96□□□□□ -1.46
PNKP-226ENST00000636840 X6R8D5 127 aa5.96□□□□□ -1.46
PNKP-226ENST00000636840 TRAV12-2A0A075B6T6 113 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 TRBV7-9A0A0J9YWB2 115 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 LOC102723971A0A1B0GUV8 181 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 A0A1W2PRE2 83 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 DIRC3C9JPN6 131 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 F6UZH7 168 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 DEFB4AO15263 64 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 CT45A10P0DMU9 189 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 HTN1P15515 57 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 TAS2R60P59551 318 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 SUMO1P63165 101 aaKnown RBP5.95□□□□□ -1.46
PNKP-226ENST00000636840 ERCC8Q13216 396 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 LGALSLQ3ZCW2 172 aaPredicted RBP5.95□□□□□ -1.46
PNKP-226ENST00000636840 ZFP69Q49AA0 526 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 CASC10Q5T4H9 136 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 ZFAND6Q6FIF0 208 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 ZNF493Q6ZR52 646 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 SLC51BQ86UW2 128 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 C1orf158Q8N1D5 194 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 Q8NAQ8 132 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 ZNF492Q9P255 531 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 RPH3ALQ9UNE2 315 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 LENEPQ9Y5L5 61 aa5.95□□□□□ -1.46
PNKP-226ENST00000636840 IGKV2-40A0A087WW87 121 aaPredicted RBP5.94□□□□□ -1.46
PNKP-226ENST00000636840 MAP1LC3B2A6NCE7 125 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 NUPR2A6NF83 97 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 FBLL1A6NHQ2 334 aaKnown RBP5.94□□□□□ -1.46
PNKP-226ENST00000636840 C11orf94C9JXX5 98 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 J3KRW8 73 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 CRXO43186 299 aaPredicted RBP5.94□□□□□ -1.46
PNKP-226ENST00000636840 EIF3GO75821 320 aaKnown RBP eCLIP5.94□□□□□ -1.46
PNKP-226ENST00000636840 IFNA7P01567 189 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 IGKV2D-40P01614 121 aaPredicted RBP5.94□□□□□ -1.46
PNKP-226ENST00000636840 H2AFB1P0C5Y9 115 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 RBMY1A1P0DJD3 496 aaKnown RBP5.94□□□□□ -1.46
PNKP-226ENST00000636840 RBMY1CP0DJD4 496 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 RNASE4P34096 147 aaKnown RBP5.94□□□□□ -1.46
PNKP-226ENST00000636840 PPT1P50897 306 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 EMP1P54849 157 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 PMS2P11Q13670 270 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 RBMY1FQ15415 496 aaKnown RBP5.94□□□□□ -1.46
PNKP-226ENST00000636840 C5orf17Q8NAS9 161 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 SUN5Q8TC36 379 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 SFT2D1Q8WV19 159 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 TMED6Q8WW62 240 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 VGLL1Q99990 258 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 PYGO2Q9BRQ0 406 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 NDFIP1Q9BT67 221 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 MAP1LC3BQ9GZQ8 125 aa5.94□□□□□ -1.46
PNKP-226ENST00000636840 TRAV12-3A0A0B4J271 114 aa5.93□□□□□ -1.46
PNKP-226ENST00000636840 C7orf71A4D174 169 aa5.93□□□□□ -1.46
PNKP-226ENST00000636840 ZNF705GA8MUZ8 300 aaPredicted RBP5.93□□□□□ -1.46
PNKP-226ENST00000636840 PRB4P10163 310 aaPredicted RBP5.93□□□□□ -1.46
PNKP-226ENST00000636840 CRISP2P16562 243 aa5.93□□□□□ -1.46
PNKP-226ENST00000636840 CEMP1Q6PRD7 247 aaPredicted RBP5.93□□□□□ -1.46
PNKP-226ENST00000636840 GOLT1AQ6ZVE7 132 aa5.93□□□□□ -1.46
PNKP-226ENST00000636840 FAM213BQ8TBF2 198 aa5.93□□□□□ -1.46
PNKP-226ENST00000636840 PHLDA1Q8WV24 401 aaPredicted RBP5.93□□□□□ -1.46
PNKP-226ENST00000636840 MBD3L1Q8WWY6 194 aa5.93□□□□□ -1.46
PNKP-226ENST00000636840 C16orf74Q96GX8 76 aa5.93□□□□□ -1.46
PNKP-226ENST00000636840 EPDR1Q9UM22 224 aa5.93□□□□□ -1.46
PNKP-226ENST00000636840 TIMM8BQ9Y5J9 83 aaPredicted RBP5.93□□□□□ -1.46
PNKP-226ENST00000636840 TRAV10A0A0B4J240 114 aa5.92□□□□□ -1.46
PNKP-226ENST00000636840 LYRM9A8MSI8 78 aa5.92□□□□□ -1.46
PNKP-226ENST00000636840 SNURFLB1AK76 121 aa5.92□□□□□ -1.46
PNKP-226ENST00000636840 RGS13O14921 159 aa5.92□□□□□ -1.46
PNKP-226ENST00000636840 FGF8P55075 233 aaPredicted RBP5.92□□□□□ -1.46
PNKP-226ENST00000636840 NANOS2P60321 138 aaKnown RBP5.92□□□□□ -1.46
PNKP-226ENST00000636840 UBE2G2P60604 165 aa5.92□□□□□ -1.46
PNKP-226ENST00000636840 ZNF726P1Q15940 193 aa5.92□□□□□ -1.46
PNKP-226ENST00000636840 SAPCD1Q5SSQ6 148 aa5.92□□□□□ -1.46
PNKP-226ENST00000636840 GFI1BQ5VTD9 330 aa5.92□□□□□ -1.46
PNKP-226ENST00000636840 CST9LP1Q5W188 147 aa5.92□□□□□ -1.46
PNKP-226ENST00000636840 HIST1H2BAQ96A08 127 aa5.92□□□□□ -1.46
PNKP-226ENST00000636840 CBY3A6NI87 242 aa5.91□□□□□ -1.46
PNKP-226ENST00000636840 KLLNB2CW77 178 aa5.91□□□□□ -1.46
PNKP-226ENST00000636840 TCRAP04437 139 aa5.91□□□□□ -1.46
PNKP-226ENST00000636840 FHITP49789 147 aa5.91□□□□□ -1.46
PNKP-226ENST00000636840 TCTAP57738 103 aa5.91□□□□□ -1.46
PNKP-226ENST00000636840 DAD1P61803 113 aa5.91□□□□□ -1.46
PNKP-226ENST00000636840 FAM222AQ5U5X8 452 aa5.91□□□□□ -1.46
PNKP-226ENST00000636840 FAM159AQ6UWV7 190 aa5.91□□□□□ -1.46
PNKP-226ENST00000636840 EIF4E3Q8N5X7 224 aaKnown RBP5.91□□□□□ -1.46
PNKP-226ENST00000636840 CYB561D1Q8N8Q1 229 aa5.91□□□□□ -1.46
PNKP-226ENST00000636840 C2CD4CQ8TF44 421 aa5.91□□□□□ -1.46
PNKP-226ENST00000636840 TMEM263Q8WUH6 116 aaKnown RBP5.91□□□□□ -1.46
PNKP-226ENST00000636840 FAM19A4Q96LR4 140 aa5.91□□□□□ -1.46
PNKP-226ENST00000636840 TCEAL7Q9BRU2 100 aa5.91□□□□□ -1.46
PNKP-226ENST00000636840 ATG101Q9BSB4 218 aa5.91□□□□□ -1.46
PNKP-226ENST00000636840 TMPRSS5Q9H3S3 457 aa5.91□□□□□ -1.46
PNKP-226ENST00000636840 TREM1Q9NP99 234 aa5.91□□□□□ -1.46
PNKP-226ENST00000636840 YTHDF2Q9Y5A9 579 aaKnown RBP5.91□□□□□ -1.46
PNKP-226ENST00000636840 ARL2-SNX15V9GYD0 113 aa5.91□□□□□ -1.46
PNKP-226ENST00000636840 IGHV1OR15-1A0A075B7D0 117 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms