RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816		A0A1W2PS18	150 aa		12.05	□□□□□ -0.48
CACNA1A-231	ENST00000636816		K7EMT4	169 aa		12.04	□□□□□ -0.48
CACNA1A-231	ENST00000636816	ZNF80	P51504	273 aa	Predicted RBP	12.04	□□□□□ -0.48
CACNA1A-231	ENST00000636816	DEFB136	Q30KP8	78 aa		12.04	□□□□□ -0.48
CACNA1A-231	ENST00000636816	OR2D3	Q8NGH3	330 aa		12.04	□□□□□ -0.48
CACNA1A-231	ENST00000636816	MRPL18	Q9H0U6	180 aa	Known RBP	12.04	□□□□□ -0.48
CACNA1A-231	ENST00000636816	NAT8B	Q9UHF3	227 aa		12.04	□□□□□ -0.48
CACNA1A-231	ENST00000636816	SNURFL	B1AK76	121 aa		12.03	□□□□□ -0.48
CACNA1A-231	ENST00000636816	SOCS3	O14543	225 aa		12.03	□□□□□ -0.48
CACNA1A-231	ENST00000636816	ZNF705D	P0CH99	300 aa	Predicted RBP	12.03	□□□□□ -0.48
CACNA1A-231	ENST00000636816	ZNF705B	P0CI00	300 aa	Predicted RBP	12.03	□□□□□ -0.48
CACNA1A-231	ENST00000636816	CDX1	P47902	265 aa	Predicted RBP	12.03	□□□□□ -0.48
CACNA1A-231	ENST00000636816	SYNJ2BP	P57105	145 aa		12.03	□□□□□ -0.48
CACNA1A-231	ENST00000636816	DEFB1	P60022	68 aa		12.03	□□□□□ -0.48
CACNA1A-231	ENST00000636816	S100A12	P80511	92 aa		12.03	□□□□□ -0.48
CACNA1A-231	ENST00000636816	TMEM136	Q6ZRR5	245 aa		12.03	□□□□□ -0.48
CACNA1A-231	ENST00000636816	AGPAT4-IT1	Q9H0P7	198 aa		12.03	□□□□□ -0.48
CACNA1A-231	ENST00000636816	TMEM213	A2RRL7	107 aa		12.03	□□□□□ -0.48
CACNA1A-231	ENST00000636816	IFITM10	A6NMD0	228 aa		12.03	□□□□□ -0.48
CACNA1A-231	ENST00000636816		A8MWL6	223 aa		12.03	□□□□□ -0.48
CACNA1A-231	ENST00000636816	FOSL1	P15407	271 aa		12.03	□□□□□ -0.48
CACNA1A-231	ENST00000636816	PDZD11	Q5EBL8	140 aa		12.03	□□□□□ -0.48
CACNA1A-231	ENST00000636816	GDF5OS	Q5U4N7	250 aa		12.03	□□□□□ -0.48
CACNA1A-231	ENST00000636816	LY6G6D	O95868	133 aa		12.02	□□□□□ -0.49
CACNA1A-231	ENST00000636816	HOXD3	P31249	432 aa	Predicted RBP	12.02	□□□□□ -0.49
CACNA1A-231	ENST00000636816	CT83	Q5H943	113 aa		12.02	□□□□□ -0.49
CACNA1A-231	ENST00000636816	PRR31	Q5SQ13	230 aa		12.02	□□□□□ -0.49
CACNA1A-231	ENST00000636816	SAPCD1	Q5SSQ6	148 aa		12.02	□□□□□ -0.49
CACNA1A-231	ENST00000636816	PGLYRP4	Q96LB8	373 aa		12.02	□□□□□ -0.49
CACNA1A-231	ENST00000636816	GNB1L	Q9BYB4	327 aa		12.02	□□□□□ -0.49
CACNA1A-231	ENST00000636816	UFC1	Q9Y3C8	167 aa		12.02	□□□□□ -0.49
CACNA1A-231	ENST00000636816	SH2D1A	O60880	128 aa		12.01	□□□□□ -0.49
CACNA1A-231	ENST00000636816	RAB4B	P61018	213 aa		12.01	□□□□□ -0.49
CACNA1A-231	ENST00000636816	DUX3	Q96PT4	197 aa		12.01	□□□□□ -0.49
CACNA1A-231	ENST00000636816	NRN1	Q9NPD7	142 aa		12.01	□□□□□ -0.49
CACNA1A-231	ENST00000636816	XKRY2	A2RUG3	117 aa		12.01	□□□□□ -0.49
CACNA1A-231	ENST00000636816	RBAKDN	A6NC62	111 aa		12.01	□□□□□ -0.49
CACNA1A-231	ENST00000636816	CT45A10	P0DMU9	189 aa		12.01	□□□□□ -0.49
CACNA1A-231	ENST00000636816	COX8C	Q7Z4L0	72 aa		12.01	□□□□□ -0.49
CACNA1A-231	ENST00000636816	OR4B1	Q8NGF8	309 aa		12.01	□□□□□ -0.49
CACNA1A-231	ENST00000636816	MRPL53	Q96EL3	112 aa	Known RBP	12.01	□□□□□ -0.49
CACNA1A-231	ENST00000636816		A0A1B0GUS0	222 aa		12	□□□□□ -0.49
CACNA1A-231	ENST00000636816	SLURP1	P55000	103 aa		12	□□□□□ -0.49
CACNA1A-231	ENST00000636816	KIAA1644	Q3SXP7	199 aa		12	□□□□□ -0.49
CACNA1A-231	ENST00000636816	ZNF738	Q8NE65	137 aa		12	□□□□□ -0.49
CACNA1A-231	ENST00000636816	OTOG	Q6ZRI0	2925 aa		12	□□□□□ -0.49
CACNA1A-231	ENST00000636816	TMSB15B	A0A087X1C1	80 aa		11.99	□□□□□ -0.49
CACNA1A-231	ENST00000636816	FBLL1	A6NHQ2	334 aa	Known RBP	11.99	□□□□□ -0.49
CACNA1A-231	ENST00000636816	PCP4L1	A6NKN8	68 aa		11.99	□□□□□ -0.49
CACNA1A-231	ENST00000636816	KHDC1L	Q5JSQ8	128 aa		11.99	□□□□□ -0.49
CACNA1A-231	ENST00000636816	FAM162B	Q5T6X4	162 aa		11.99	□□□□□ -0.49
CACNA1A-231	ENST00000636816	HIST3H2BB	Q8N257	126 aa		11.99	□□□□□ -0.49
CACNA1A-231	ENST00000636816	GRIFIN	A4D1Z8	144 aa		11.99	□□□□□ -0.49
CACNA1A-231	ENST00000636816	CAMP	P49913	170 aa		11.99	□□□□□ -0.49
CACNA1A-231	ENST00000636816	REC114	Q7Z4M0	266 aa		11.99	□□□□□ -0.49
CACNA1A-231	ENST00000636816	WFDC3	Q8IUB2	231 aa		11.99	□□□□□ -0.49
CACNA1A-231	ENST00000636816	C11orf44	Q8N8P7	122 aa		11.99	□□□□□ -0.49
CACNA1A-231	ENST00000636816	GFRA4	Q9GZZ7	299 aa		11.99	□□□□□ -0.49
CACNA1A-231	ENST00000636816		A0A1B0GXF2	115 aa		11.98	□□□□□ -0.49
CACNA1A-231	ENST00000636816	KLF5	Q13887	457 aa	Predicted RBP	11.98	□□□□□ -0.49
CACNA1A-231	ENST00000636816	WDR73	Q6P4I2	378 aa		11.98	□□□□□ -0.49
CACNA1A-231	ENST00000636816	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.98	□□□□□ -0.49
CACNA1A-231	ENST00000636816	C9orf47	Q6ZRZ4	202 aa		11.98	□□□□□ -0.49
CACNA1A-231	ENST00000636816		A8MWP6	167 aa		11.98	□□□□□ -0.49
CACNA1A-231	ENST00000636816		F6UB75	175 aa		11.98	□□□□□ -0.49
CACNA1A-231	ENST00000636816	LGALS9	O00182	355 aa		11.98	□□□□□ -0.49
CACNA1A-231	ENST00000636816	ZNF138	P52744	262 aa		11.98	□□□□□ -0.49
CACNA1A-231	ENST00000636816	ZNF575	Q86XF7	245 aa		11.98	□□□□□ -0.49
CACNA1A-231	ENST00000636816	OR11H1	Q8NG94	326 aa		11.98	□□□□□ -0.49
CACNA1A-231	ENST00000636816	WIPF2	Q8TF74	440 aa	Predicted RBP	11.98	□□□□□ -0.49
CACNA1A-231	ENST00000636816	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.98	□□□□□ -0.49
CACNA1A-231	ENST00000636816	HIVEP2	P31629	2446 aa		11.97	□□□□□ -0.49
CACNA1A-231	ENST00000636816	TMEM238L	A0A1B0GVL6	79 aa		11.97	□□□□□ -0.49
CACNA1A-231	ENST00000636816	TMEM189	A5PLL7	270 aa		11.97	□□□□□ -0.49
CACNA1A-231	ENST00000636816	RNASE1	P07998	156 aa	Known RBP	11.97	□□□□□ -0.49
CACNA1A-231	ENST00000636816	SLA	Q13239	276 aa		11.97	□□□□□ -0.49
CACNA1A-231	ENST00000636816	TMEM78	Q5T7P6	136 aa		11.97	□□□□□ -0.49
CACNA1A-231	ENST00000636816	ADAMTSL5	Q6ZMM2	481 aa		11.97	□□□□□ -0.49
CACNA1A-231	ENST00000636816		Q6ZQT7	251 aa		11.97	□□□□□ -0.49
CACNA1A-231	ENST00000636816	NDFIP1	Q9BT67	221 aa		11.97	□□□□□ -0.49
CACNA1A-231	ENST00000636816	TMEM160	Q9NX00	188 aa		11.97	□□□□□ -0.49
CACNA1A-231	ENST00000636816	CLEC5A	Q9NY25	188 aa		11.97	□□□□□ -0.49
CACNA1A-231	ENST00000636816	FAM231B	A6NCW3	169 aa		11.96	□□□□□ -0.49
CACNA1A-231	ENST00000636816	C2orf70	A6NJV1	201 aa		11.96	□□□□□ -0.49
CACNA1A-231	ENST00000636816	TFPI2	P48307	235 aa		11.96	□□□□□ -0.49
CACNA1A-231	ENST00000636816	FOXA3	P55318	350 aa	Predicted RBP	11.96	□□□□□ -0.49
CACNA1A-231	ENST00000636816	TMEM256	Q8N2U0	113 aa		11.96	□□□□□ -0.49
CACNA1A-231	ENST00000636816	DCANP1	Q8TF63	244 aa		11.96	□□□□□ -0.49
CACNA1A-231	ENST00000636816	C4orf3	Q8WVX3	66 aa		11.96	□□□□□ -0.49
CACNA1A-231	ENST00000636816	NUPR1	O60356	82 aa		11.96	□□□□□ -0.5
CACNA1A-231	ENST00000636816	MT-ND6	P03923	174 aa		11.96	□□□□□ -0.5
CACNA1A-231	ENST00000636816	COA6	Q5JTJ3	125 aa	Known RBP	11.96	□□□□□ -0.5
CACNA1A-231	ENST00000636816	KLHL30-AS1	Q8NEE0	82 aa		11.96	□□□□□ -0.5
CACNA1A-231	ENST00000636816	MS4A6A	Q9H2W1	248 aa		11.96	□□□□□ -0.5
CACNA1A-231	ENST00000636816		F2Z2F3	143 aa		11.95	□□□□□ -0.5
CACNA1A-231	ENST00000636816	LINC01619	G3V211	115 aa		11.95	□□□□□ -0.5
CACNA1A-231	ENST00000636816	HLA-DQA1	P01909	254 aa		11.95	□□□□□ -0.5
CACNA1A-231	ENST00000636816	APCS	P02743	223 aa		11.95	□□□□□ -0.5
CACNA1A-231	ENST00000636816	CD28	P10747	220 aa		11.95	□□□□□ -0.5
CACNA1A-231	ENST00000636816	COX19	Q49B96	90 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms