RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 GAGE12BA1L429 117 aa10.53□□□□□ -0.72
CACNA1A-230ENST00000636768 C7orf71A4D174 169 aa10.53□□□□□ -0.72
CACNA1A-230ENST00000636768 GAGE7O76087 117 aa10.53□□□□□ -0.72
CACNA1A-230ENST00000636768 OR10J4P0C629 311 aa10.53□□□□□ -0.72
CACNA1A-230ENST00000636768 NBEAP1P0C6P0 100 aa10.53□□□□□ -0.72
CACNA1A-230ENST00000636768 GAGE12FP0CL80 117 aa10.53□□□□□ -0.72
CACNA1A-230ENST00000636768 GAGE12GP0CL81 117 aa10.53□□□□□ -0.72
CACNA1A-230ENST00000636768 GAGE12IP0CL82 117 aa10.53□□□□□ -0.72
CACNA1A-230ENST00000636768 OR5I1Q13606 314 aa10.53□□□□□ -0.72
CACNA1A-230ENST00000636768 SOHLH1Q5JUK2 328 aa10.53□□□□□ -0.72
CACNA1A-230ENST00000636768 Q6ZR54 194 aa10.53□□□□□ -0.72
CACNA1A-230ENST00000636768 FAM167A-AS1Q96KT0 104 aa10.53□□□□□ -0.72
CACNA1A-230ENST00000636768 LINC00477Q96M19 166 aa10.53□□□□□ -0.72
CACNA1A-230ENST00000636768 PAXXQ9BUH6 204 aa10.53□□□□□ -0.72
CACNA1A-230ENST00000636768 FUT9Q9Y231 359 aa10.53□□□□□ -0.72
CACNA1A-230ENST00000636768 IGKV2-40A0A087WW87 121 aaPredicted RBP10.52□□□□□ -0.73
CACNA1A-230ENST00000636768 OR7C2O60412 319 aa10.52□□□□□ -0.73
CACNA1A-230ENST00000636768 MPC2O95563 127 aa10.52□□□□□ -0.73
CACNA1A-230ENST00000636768 IGKV2D-40P01614 121 aaPredicted RBP10.52□□□□□ -0.73
CACNA1A-230ENST00000636768 RNASE4P34096 147 aaKnown RBP10.52□□□□□ -0.73
CACNA1A-230ENST00000636768 CCL18P55774 89 aa10.52□□□□□ -0.73
CACNA1A-230ENST00000636768 TMEM78Q5T7P6 136 aa10.52□□□□□ -0.73
CACNA1A-230ENST00000636768 RNF141Q8WVD5 230 aa10.52□□□□□ -0.73
CACNA1A-230ENST00000636768 AGPAT4-IT1Q9H0P7 198 aa10.52□□□□□ -0.73
CACNA1A-230ENST00000636768 HSPB11Q9Y547 144 aa10.52□□□□□ -0.73
CACNA1A-230ENST00000636768 KLLNB2CW77 178 aa10.51□□□□□ -0.73
CACNA1A-230ENST00000636768 IFNA5P01569 189 aa10.51□□□□□ -0.73
CACNA1A-230ENST00000636768 GPX1P07203 203 aa10.51□□□□□ -0.73
CACNA1A-230ENST00000636768 RPL12P30050 165 aaKnown RBP10.51□□□□□ -0.73
CACNA1A-230ENST00000636768 BTN1A1Q13410 526 aa10.51□□□□□ -0.73
CACNA1A-230ENST00000636768 LINC00612Q8N6U2 182 aa10.51□□□□□ -0.73
CACNA1A-230ENST00000636768 ZNF680Q8NEM1 530 aa10.51□□□□□ -0.73
CACNA1A-230ENST00000636768 SCGB1C1Q8TD33 95 aa10.51□□□□□ -0.73
CACNA1A-230ENST00000636768 SMIM3Q9BZL3 60 aa10.51□□□□□ -0.73
CACNA1A-230ENST00000636768 TRAV26-1A0A087WT03 109 aa10.5□□□□□ -0.73
CACNA1A-230ENST00000636768 A0A1B0GVY2 172 aa10.5□□□□□ -0.73
CACNA1A-230ENST00000636768 M6PRP20645 277 aa10.5□□□□□ -0.73
CACNA1A-230ENST00000636768 UBE2L3P68036 154 aaKnown RBP10.5□□□□□ -0.73
CACNA1A-230ENST00000636768 CD300CQ08708 224 aa10.5□□□□□ -0.73
CACNA1A-230ENST00000636768 FFAR4Q5NUL3 377 aa10.5□□□□□ -0.73
CACNA1A-230ENST00000636768 C1orf134Q5TEV5 83 aa10.5□□□□□ -0.73
CACNA1A-230ENST00000636768 C9orf47Q6ZRZ4 202 aa10.5□□□□□ -0.73
CACNA1A-230ENST00000636768 FXYD5Q96DB9 178 aa10.5□□□□□ -0.73
CACNA1A-230ENST00000636768 GNPNAT1Q96EK6 184 aaPredicted RBP10.5□□□□□ -0.73
CACNA1A-230ENST00000636768 PHYHIPLQ96FC7 376 aa10.5□□□□□ -0.73
CACNA1A-230ENST00000636768 FAM19A4Q96LR4 140 aa10.5□□□□□ -0.73
CACNA1A-230ENST00000636768 VGLL1Q99990 258 aa10.5□□□□□ -0.73
CACNA1A-230ENST00000636768 MBD2Q9UBB5 411 aa10.5□□□□□ -0.73
CACNA1A-230ENST00000636768 A0A0J9YY99 117 aa10.49□□□□□ -0.73
CACNA1A-230ENST00000636768 CRISP2P16562 243 aa10.49□□□□□ -0.73
CACNA1A-230ENST00000636768 CSN1S1P47710 185 aa10.49□□□□□ -0.73
CACNA1A-230ENST00000636768 DAZ2Q13117 558 aaKnown RBP10.49□□□□□ -0.73
CACNA1A-230ENST00000636768 Q6ZTI0 123 aa10.49□□□□□ -0.73
CACNA1A-230ENST00000636768 EIF4E3Q8N5X7 224 aaKnown RBP10.49□□□□□ -0.73
CACNA1A-230ENST00000636768 GSN-AS1Q9NRJ2 163 aa10.49□□□□□ -0.73
CACNA1A-230ENST00000636768 TRGV2A0A075B6R0 118 aa10.48□□□□□ -0.73
CACNA1A-230ENST00000636768 RGS13O14921 159 aa10.48□□□□□ -0.73
CACNA1A-230ENST00000636768 ZNF324O75467 553 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-230ENST00000636768 NMBP08949 121 aa10.48□□□□□ -0.73
CACNA1A-230ENST00000636768 HOXA5P20719 270 aa10.48□□□□□ -0.73
CACNA1A-230ENST00000636768 TAS2R45P59539 299 aa10.48□□□□□ -0.73
CACNA1A-230ENST00000636768 RANP62826 216 aaKnown RBP10.48□□□□□ -0.73
CACNA1A-230ENST00000636768 KHDC3LQ587J8 217 aa10.48□□□□□ -0.73
CACNA1A-230ENST00000636768 ZNRF2Q8NHG8 242 aa10.48□□□□□ -0.73
CACNA1A-230ENST00000636768 LINC00467Q9BRT7 94 aa10.48□□□□□ -0.73
CACNA1A-230ENST00000636768 TMPRSS5Q9H3S3 457 aa10.48□□□□□ -0.73
CACNA1A-230ENST00000636768 LINC00588Q9Y4M8 146 aa10.48□□□□□ -0.73
CACNA1A-230ENST00000636768 TRGV1A0A0A0MS02 117 aa10.47□□□□□ -0.73
CACNA1A-230ENST00000636768 ZNF138P52744 262 aa10.47□□□□□ -0.73
CACNA1A-230ENST00000636768 ANXA2RQ3ZCQ2 193 aa10.47□□□□□ -0.73
CACNA1A-230ENST00000636768 SSX7Q7RTT5 188 aa10.47□□□□□ -0.73
CACNA1A-230ENST00000636768 ZFAND2AQ8N6M9 145 aa10.47□□□□□ -0.73
CACNA1A-230ENST00000636768 C11orf72Q8NBR9 251 aa10.47□□□□□ -0.73
CACNA1A-230ENST00000636768 Q8TAT8 98 aa10.47□□□□□ -0.73
CACNA1A-230ENST00000636768 RXFP4Q8TDU9 374 aa10.47□□□□□ -0.73
CACNA1A-230ENST00000636768 Q9H3A6 140 aa10.47□□□□□ -0.73
CACNA1A-230ENST00000636768 ZNF492Q9P255 531 aa10.47□□□□□ -0.73
CACNA1A-230ENST00000636768 NBDYA0A0U1RRE5 68 aa10.46□□□□□ -0.73
CACNA1A-230ENST00000636768 PRR9Q5T870 116 aa10.46□□□□□ -0.73
CACNA1A-230ENST00000636768 LYPD1Q8N2G4 141 aa10.46□□□□□ -0.73
CACNA1A-230ENST00000636768 ZNF503Q96F45 646 aa10.46□□□□□ -0.73
CACNA1A-230ENST00000636768 ARPC5LQ9BPX5 153 aa10.46□□□□□ -0.73
CACNA1A-230ENST00000636768 IGHV1OR15-1A0A075B7D0 117 aa10.45□□□□□ -0.74
CACNA1A-230ENST00000636768 TCL1AP56279 114 aa10.45□□□□□ -0.74
CACNA1A-230ENST00000636768 IBA57Q5T440 356 aaKnown RBP10.45□□□□□ -0.74
CACNA1A-230ENST00000636768 AKAP14Q86UN6 197 aa10.45□□□□□ -0.74
CACNA1A-230ENST00000636768 KLF12Q9Y4X4 402 aa10.45□□□□□ -0.74
CACNA1A-230ENST00000636768 ALG5Q9Y673 324 aa10.45□□□□□ -0.74
CACNA1A-230ENST00000636768 TRBV7-9A0A0J9YWB2 115 aa10.44□□□□□ -0.74
CACNA1A-230ENST00000636768 RBAKDNA6NC62 111 aa10.44□□□□□ -0.74
CACNA1A-230ENST00000636768 H3BNG1 76 aa10.44□□□□□ -0.74
CACNA1A-230ENST00000636768 EIF3GO75821 320 aaKnown RBP eCLIP10.44□□□□□ -0.74
CACNA1A-230ENST00000636768 ACOT6Q3I5F7 207 aaPredicted RBP10.44□□□□□ -0.74
CACNA1A-230ENST00000636768 HYLS1Q96M11 299 aa10.44□□□□□ -0.74
CACNA1A-230ENST00000636768 WFDC1Q9HC57 220 aa10.44□□□□□ -0.74
CACNA1A-230ENST00000636768 TP53TG3Q9ULZ0 132 aa10.44□□□□□ -0.74
CACNA1A-230ENST00000636768 A0A1W2PPV4 95 aa10.43□□□□□ -0.74
CACNA1A-230ENST00000636768 SPINK4O60575 86 aa10.43□□□□□ -0.74
CACNA1A-230ENST00000636768 FAM74A1Q5RGS3 127 aa10.43□□□□□ -0.74
CACNA1A-230ENST00000636768 Q6ZQT7 251 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms