RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 NEK7Q8TDX7 302 aa1.74□□□□□ -2.13
CLN5-212ENST00000636602 SLC50A1Q9BRV3 221 aa1.74□□□□□ -2.13
CLN5-212ENST00000636602 SS18L2Q9UHA2 77 aa1.74□□□□□ -2.13
CLN5-212ENST00000636602 FANCMQ8IYD8 2048 aa1.74□□□□□ -2.13
CLN5-212ENST00000636602 PLXNA2O75051 1894 aa1.73□□□□□ -2.13
CLN5-212ENST00000636602 TNRC6BQ9UPQ9 1833 aaKnown RBP1.73□□□□□ -2.13
CLN5-212ENST00000636602 BPTFQ12830 3046 aa1.73□□□□□ -2.13
CLN5-212ENST00000636602 SCN8AQ9UQD0 1980 aa1.73□□□□□ -2.13
CLN5-212ENST00000636602 H7C1C5 153 aa1.73□□□□□ -2.13
CLN5-212ENST00000636602 AIPO00170 330 aa1.73□□□□□ -2.13
CLN5-212ENST00000636602 APODP05090 189 aa1.73□□□□□ -2.13
CLN5-212ENST00000636602 KDELR1P24390 212 aa1.73□□□□□ -2.13
CLN5-212ENST00000636602 LCN6P62502 163 aa1.73□□□□□ -2.13
CLN5-212ENST00000636602 GNG3P63215 75 aa1.73□□□□□ -2.13
CLN5-212ENST00000636602 TSNQ15631 228 aaKnown RBP1.73□□□□□ -2.13
CLN5-212ENST00000636602 TRIQKQ629K1 86 aa1.73□□□□□ -2.13
CLN5-212ENST00000636602 SMIM20Q8N5G0 67 aa1.73□□□□□ -2.13
CLN5-212ENST00000636602 GINS3Q9BRX5 216 aa1.73□□□□□ -2.13
CLN5-212ENST00000636602 SNRNP25Q9BV90 132 aaKnown RBP1.73□□□□□ -2.13
CLN5-212ENST00000636602 PBDC1Q9BVG4 233 aa1.73□□□□□ -2.13
CLN5-212ENST00000636602 LYRM2Q9NU23 88 aaPredicted RBP1.73□□□□□ -2.13
CLN5-212ENST00000636602 NHP2Q9NX24 153 aaKnown RBP1.73□□□□□ -2.13
CLN5-212ENST00000636602 TAS2R4Q9NYW5 299 aa1.73□□□□□ -2.13
CLN5-212ENST00000636602 SSR3Q9UNL2 185 aa1.73□□□□□ -2.13
CLN5-212ENST00000636602 WDFY4Q6ZS81 3184 aa1.73□□□□□ -2.13
CLN5-212ENST00000636602 BDP1A6H8Y1 2624 aa1.72□□□□□ -2.13
CLN5-212ENST00000636602 A0A0C4DFX4 3053 aa1.72□□□□□ -2.13
CLN5-212ENST00000636602 TRAV1-1A0A0B4J248 108 aa1.72□□□□□ -2.13
CLN5-212ENST00000636602 C7orf71A4D174 169 aa1.72□□□□□ -2.13
CLN5-212ENST00000636602 APOC4-APOC2K7ER74 178 aa1.72□□□□□ -2.13
CLN5-212ENST00000636602 TAX1BP3O14907 124 aa1.72□□□□□ -2.13
CLN5-212ENST00000636602 APOC2P02655 101 aa1.72□□□□□ -2.13
CLN5-212ENST00000636602 MGST1P10620 155 aaKnown RBP1.72□□□□□ -2.13
CLN5-212ENST00000636602 BCL2L15Q5TBC7 163 aa1.72□□□□□ -2.13
CLN5-212ENST00000636602 NCBP2-AS2Q69YL0 99 aa1.72□□□□□ -2.13
CLN5-212ENST00000636602 EXOC3-AS1Q8N2X6 119 aa1.72□□□□□ -2.13
CLN5-212ENST00000636602 SLAMF6Q96DU3 332 aa1.72□□□□□ -2.13
CLN5-212ENST00000636602 HS3ST2Q9Y278 367 aa1.72□□□□□ -2.13
CLN5-212ENST00000636602 SLC35A3Q9Y2D2 325 aa1.72□□□□□ -2.13
CLN5-212ENST00000636602 UFC1Q9Y3C8 167 aa1.72□□□□□ -2.13
CLN5-212ENST00000636602 DNAH14Q0VDD8 3507 aa1.72□□□□□ -2.13
CLN5-212ENST00000636602 MYLKQ15746 1914 aa1.72□□□□□ -2.13
CLN5-212ENST00000636602 MYO18AQ92614 2054 aaKnown RBP1.71□□□□□ -2.13
CLN5-212ENST00000636602 TECTAO75443 2155 aa1.71□□□□□ -2.14
CLN5-212ENST00000636602 TRAV14DV4A0A0A6YYC5 116 aa1.71□□□□□ -2.14
CLN5-212ENST00000636602 PGRMC1O00264 195 aaKnown RBP1.71□□□□□ -2.14
CLN5-212ENST00000636602 MFSD11O43934 449 aa1.71□□□□□ -2.14
CLN5-212ENST00000636602 ASAH2BP0C7U1 165 aa1.71□□□□□ -2.14
CLN5-212ENST00000636602 RNASE4P34096 147 aaKnown RBP1.71□□□□□ -2.14
CLN5-212ENST00000636602 GNG11P61952 73 aa1.71□□□□□ -2.14
CLN5-212ENST00000636602 SNCBQ16143 134 aa1.71□□□□□ -2.14
CLN5-212ENST00000636602 RNASE10Q5GAN6 216 aaKnown RBP1.71□□□□□ -2.14
CLN5-212ENST00000636602 C3orf33Q6P1S2 294 aa1.71□□□□□ -2.14
CLN5-212ENST00000636602 C22orf39Q6P5X5 142 aa1.71□□□□□ -2.14
CLN5-212ENST00000636602 C4orf22Q6V702 233 aa1.71□□□□□ -2.14
CLN5-212ENST00000636602 TSTD1Q8NFU3 115 aa1.71□□□□□ -2.14
CLN5-212ENST00000636602 OR2T10Q8NGZ9 312 aa1.71□□□□□ -2.14
CLN5-212ENST00000636602 ZNF563Q8TA94 476 aa1.71□□□□□ -2.14
CLN5-212ENST00000636602 NAA38Q9BRA0 125 aaKnown RBP1.71□□□□□ -2.14
CLN5-212ENST00000636602 PRADC1Q9BSG0 188 aa1.71□□□□□ -2.14
CLN5-212ENST00000636602 SPAG17Q6Q759 2223 aa1.71□□□□□ -2.14
CLN5-212ENST00000636602 ZFC3H1O60293 1989 aaKnown RBP1.7□□□□□ -2.14
CLN5-212ENST00000636602 VPS13AQ96RL7 3174 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 TRAV3A0A0B4J244 114 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 OR2T1O43869 369 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 BAALC-AS2P0C853 105 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 HLA-EP13747 358 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 LAMA1P25391 3075 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 CRYBA4P53673 196 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 TCTAP57738 103 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 DYNLT1P63172 113 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 SARNPP82979 210 aaKnown RBP1.7□□□□□ -2.14
CLN5-212ENST00000636602 WHAMMP3Q1A5X7 153 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 SCGB2B2Q4G0G5 96 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 WDFY3Q8IZQ1 3526 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 OR10J5Q8NHC4 309 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 MAGOHBQ96A72 148 aaKnown RBP1.7□□□□□ -2.14
CLN5-212ENST00000636602 YPEL2Q96QA6 119 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 LYSMD1Q96S90 227 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 MRPL32Q9BYC8 188 aaKnown RBP1.7□□□□□ -2.14
CLN5-212ENST00000636602 SH3BGRL3Q9H299 93 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 TRABDQ9H4I3 376 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 ACER3Q9NUN7 267 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 OR5AC2Q9NZP5 309 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 V9GYQ6 96 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 FRYLO94915 3013 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 NCOR1O75376 2440 aa1.7□□□□□ -2.14
CLN5-212ENST00000636602 FREM1Q5H8C1 2179 aa1.69□□□□□ -2.14
CLN5-212ENST00000636602 PCDH15Q96QU1 1955 aa1.69□□□□□ -2.14
CLN5-212ENST00000636602 TRGV10A0A0A0MS01 117 aa1.69□□□□□ -2.14
CLN5-212ENST00000636602 LOC285095A0A1B0GVY8 99 aa1.69□□□□□ -2.14
CLN5-212ENST00000636602 DUXBA0A1W2PPF3 345 aa1.69□□□□□ -2.14
CLN5-212ENST00000636602 RIIAD1A6NNX1 92 aa1.69□□□□□ -2.14
CLN5-212ENST00000636602 C10orf142B7Z368 130 aa1.69□□□□□ -2.14
CLN5-212ENST00000636602 UBL3O95164 117 aa1.69□□□□□ -2.14
CLN5-212ENST00000636602 FABP1P07148 127 aa1.69□□□□□ -2.14
CLN5-212ENST00000636602 MIFP14174 115 aa1.69□□□□□ -2.14
CLN5-212ENST00000636602 RPL22P35268 128 aaKnown RBP1.69□□□□□ -2.14
CLN5-212ENST00000636602 MAXP61244 160 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms