RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 OR5AC2Q9NZP5 309 aa12.56□□□□□ -0.4
PNKP-225ENST00000636214 FAT2Q9NYQ8 4349 aa12.55□□□□□ -0.4
PNKP-225ENST00000636214 TRAV26-1A0A087WT03 109 aa12.55□□□□□ -0.4
PNKP-225ENST00000636214 NDUFB4O95168 129 aa12.55□□□□□ -0.4
PNKP-225ENST00000636214 GPX1P07203 203 aa12.55□□□□□ -0.4
PNKP-225ENST00000636214 ICAM4Q14773 271 aa12.55□□□□□ -0.4
PNKP-225ENST00000636214 FAM122CQ6P4D5 195 aa12.55□□□□□ -0.4
PNKP-225ENST00000636214 MIR17HGQ75NE6 70 aa12.55□□□□□ -0.4
PNKP-225ENST00000636214 EXOC3-AS1Q8N2X6 119 aa12.55□□□□□ -0.4
PNKP-225ENST00000636214 PAXXQ9BUH6 204 aa12.55□□□□□ -0.4
PNKP-225ENST00000636214 OR51M1Q9H341 326 aa12.55□□□□□ -0.4
PNKP-225ENST00000636214 PKHD1P08F94 4074 aa12.54□□□□□ -0.4
PNKP-225ENST00000636214 TRGV2A0A075B6R0 118 aa12.54□□□□□ -0.4
PNKP-225ENST00000636214 A0A0J9YY99 117 aa12.54□□□□□ -0.4
PNKP-225ENST00000636214 NBDYA0A0U1RRE5 68 aa12.54□□□□□ -0.4
PNKP-225ENST00000636214 OR7C2O60412 319 aa12.54□□□□□ -0.4
PNKP-225ENST00000636214 NBEAP1P0C6P0 100 aa12.54□□□□□ -0.4
PNKP-225ENST00000636214 RNASE4P34096 147 aaKnown RBP12.54□□□□□ -0.4
PNKP-225ENST00000636214 LINC00612Q8N6U2 182 aa12.54□□□□□ -0.4
PNKP-225ENST00000636214 RXFP4Q8TDU9 374 aa12.54□□□□□ -0.4
PNKP-225ENST00000636214 WDR61Q9GZS3 305 aaKnown RBP12.54□□□□□ -0.4
PNKP-225ENST00000636214 KIAA1109Q2LD37 5005 aa12.54□□□□□ -0.4
PNKP-225ENST00000636214 RGS13O14921 159 aa12.53□□□□□ -0.4
PNKP-225ENST00000636214 IFNA5P01569 189 aa12.53□□□□□ -0.4
PNKP-225ENST00000636214 OR10J4P0C629 311 aa12.53□□□□□ -0.4
PNKP-225ENST00000636214 CSN1S1P47710 185 aa12.53□□□□□ -0.4
PNKP-225ENST00000636214 DAZ2Q13117 558 aaKnown RBP12.53□□□□□ -0.4
PNKP-225ENST00000636214 BTN1A1Q13410 526 aa12.53□□□□□ -0.4
PNKP-225ENST00000636214 SSX7Q7RTT5 188 aa12.53□□□□□ -0.4
PNKP-225ENST00000636214 EIF4E3Q8N5X7 224 aaKnown RBP12.53□□□□□ -0.4
PNKP-225ENST00000636214 ZNRF2Q8NHG8 242 aa12.53□□□□□ -0.4
PNKP-225ENST00000636214 SCGB1C1Q8TD33 95 aa12.53□□□□□ -0.4
PNKP-225ENST00000636214 PPP1R1CQ8WVI7 109 aa12.53□□□□□ -0.4
PNKP-225ENST00000636214 ATP5SQ99766 215 aa12.53□□□□□ -0.4
PNKP-225ENST00000636214 AGPAT4-IT1Q9H0P7 198 aa12.53□□□□□ -0.4
PNKP-225ENST00000636214 FUT9Q9Y231 359 aa12.53□□□□□ -0.4
PNKP-225ENST00000636214 LINC00588Q9Y4M8 146 aa12.53□□□□□ -0.4
PNKP-225ENST00000636214 IGKV2-40A0A087WW87 121 aaPredicted RBP12.52□□□□□ -0.41
PNKP-225ENST00000636214 TRGV1A0A0A0MS02 117 aa12.52□□□□□ -0.41
PNKP-225ENST00000636214 KLLNB2CW77 178 aa12.52□□□□□ -0.41
PNKP-225ENST00000636214 IGKV2D-40P01614 121 aaPredicted RBP12.52□□□□□ -0.41
PNKP-225ENST00000636214 MED14OSP0DP75 135 aa12.52□□□□□ -0.41
PNKP-225ENST00000636214 C9orf47Q6ZRZ4 202 aa12.52□□□□□ -0.41
PNKP-225ENST00000636214 ZNF503Q96F45 646 aa12.52□□□□□ -0.41
PNKP-225ENST00000636214 ARPC5LQ9BPX5 153 aa12.52□□□□□ -0.41
PNKP-225ENST00000636214 H0YIZ8 118 aa12.51□□□□□ -0.41
PNKP-225ENST00000636214 NMBP08949 121 aa12.51□□□□□ -0.41
PNKP-225ENST00000636214 TAS2R45P59539 299 aa12.51□□□□□ -0.41
PNKP-225ENST00000636214 CD300CQ08708 224 aa12.51□□□□□ -0.41
PNKP-225ENST00000636214 ANXA2RQ3ZCQ2 193 aa12.51□□□□□ -0.41
PNKP-225ENST00000636214 Q6ZTI0 123 aa12.51□□□□□ -0.41
PNKP-225ENST00000636214 C6orf223Q8N319 242 aa12.51□□□□□ -0.41
PNKP-225ENST00000636214 FAM167A-AS1Q96KT0 104 aa12.51□□□□□ -0.41
PNKP-225ENST00000636214 TMPRSS5Q9H3S3 457 aa12.51□□□□□ -0.41
PNKP-225ENST00000636214 GSN-AS1Q9NRJ2 163 aa12.51□□□□□ -0.41
PNKP-225ENST00000636214 CRISP2P16562 243 aa12.5□□□□□ -0.41
PNKP-225ENST00000636214 H2BFSP57053 126 aa12.5□□□□□ -0.41
PNKP-225ENST00000636214 UBE2L3P68036 154 aaKnown RBP12.5□□□□□ -0.41
PNKP-225ENST00000636214 IFITM3Q01628 133 aa12.5□□□□□ -0.41
PNKP-225ENST00000636214 KHDC3LQ587J8 217 aa12.5□□□□□ -0.41
PNKP-225ENST00000636214 TTC32Q5I0X7 151 aa12.5□□□□□ -0.41
PNKP-225ENST00000636214 FFAR4Q5NUL3 377 aa12.5□□□□□ -0.41
PNKP-225ENST00000636214 LINC00467Q9BRT7 94 aa12.5□□□□□ -0.41
PNKP-225ENST00000636214 MARVELD1Q9BSK0 173 aa12.5□□□□□ -0.41
PNKP-225ENST00000636214 HSPB11Q9Y547 144 aa12.5□□□□□ -0.41
PNKP-225ENST00000636214 A6NHS1 94 aa12.49□□□□□ -0.41
PNKP-225ENST00000636214 H3BNG1 76 aa12.49□□□□□ -0.41
PNKP-225ENST00000636214 ZNF324O75467 553 aaPredicted RBP12.49□□□□□ -0.41
PNKP-225ENST00000636214 MPC2O95563 127 aa12.49□□□□□ -0.41
PNKP-225ENST00000636214 HOXA5P20719 270 aa12.49□□□□□ -0.41
PNKP-225ENST00000636214 ZNF138P52744 262 aa12.49□□□□□ -0.41
PNKP-225ENST00000636214 FXYD5Q96DB9 178 aa12.49□□□□□ -0.41
PNKP-225ENST00000636214 PHYHIPLQ96FC7 376 aa12.49□□□□□ -0.41
PNKP-225ENST00000636214 FAM19A4Q96LR4 140 aa12.49□□□□□ -0.41
PNKP-225ENST00000636214 VGLL1Q99990 258 aa12.49□□□□□ -0.41
PNKP-225ENST00000636214 Q9H8V8 135 aa12.49□□□□□ -0.41
PNKP-225ENST00000636214 ZNF492Q9P255 531 aa12.49□□□□□ -0.41
PNKP-225ENST00000636214 MUC4Q99102 2169 aa12.49□□□□□ -0.41
PNKP-225ENST00000636214 RPL12P30050 165 aaKnown RBP12.48□□□□□ -0.41
PNKP-225ENST00000636214 TCL1AP56279 114 aa12.48□□□□□ -0.41
PNKP-225ENST00000636214 LYPD1Q8N2G4 141 aa12.48□□□□□ -0.41
PNKP-225ENST00000636214 SMIM3Q9BZL3 60 aa12.48□□□□□ -0.41
PNKP-225ENST00000636214 IGHV1OR15-1A0A075B7D0 117 aa12.47□□□□□ -0.41
PNKP-225ENST00000636214 TRBV7-9A0A0J9YWB2 115 aa12.47□□□□□ -0.41
PNKP-225ENST00000636214 RANP62826 216 aaKnown RBP12.47□□□□□ -0.41
PNKP-225ENST00000636214 IBA57Q5T440 356 aaKnown RBP12.47□□□□□ -0.41
PNKP-225ENST00000636214 C11orf72Q8NBR9 251 aa12.47□□□□□ -0.41
PNKP-225ENST00000636214 Q9H3A6 140 aa12.47□□□□□ -0.41
PNKP-225ENST00000636214 RBAKDNA6NC62 111 aa12.46□□□□□ -0.41
PNKP-225ENST00000636214 ZNF415Q09FC8 603 aa12.46□□□□□ -0.41
PNKP-225ENST00000636214 FAM74A1Q5RGS3 127 aa12.46□□□□□ -0.41
PNKP-225ENST00000636214 ZFAND2AQ8N6M9 145 aa12.46□□□□□ -0.41
PNKP-225ENST00000636214 Q8TAT8 98 aa12.46□□□□□ -0.41
PNKP-225ENST00000636214 MBD2Q9UBB5 411 aa12.46□□□□□ -0.41
PNKP-225ENST00000636214 DNAH11Q96DT5 4516 aa12.46□□□□□ -0.41
PNKP-225ENST00000636214 ACOT6Q3I5F7 207 aaPredicted RBP12.45□□□□□ -0.42
PNKP-225ENST00000636214 CMTM2Q8TAZ6 248 aa12.45□□□□□ -0.42
PNKP-225ENST00000636214 C18orf15Q96N68 181 aa12.45□□□□□ -0.42
PNKP-225ENST00000636214 MRPS16Q9Y3D3 137 aaKnown RBP12.45□□□□□ -0.42
PNKP-225ENST00000636214 KLF12Q9Y4X4 402 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms