RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 MSRB1Q9NZV6 116 aa11.53□□□□□ -0.56
CACNA1A-220ENST00000635988 TMEM8BA6NDV4 472 aa11.52□□□□□ -0.56
CACNA1A-220ENST00000635988 PRRG2O14669 202 aa11.52□□□□□ -0.56
CACNA1A-220ENST00000635988 MYOZ3Q8TDC0 251 aa11.52□□□□□ -0.56
CACNA1A-220ENST00000635988 FANCD2OSQ96PS1 177 aa11.52□□□□□ -0.56
CACNA1A-220ENST00000635988 IGLL5B9A064 214 aa11.52□□□□□ -0.57
CACNA1A-220ENST00000635988 K7ERJ3 54 aa11.52□□□□□ -0.57
CACNA1A-220ENST00000635988 ZNF575Q86XF7 245 aa11.52□□□□□ -0.57
CACNA1A-220ENST00000635988 DPM3Q9P2X0 92 aa11.52□□□□□ -0.57
CACNA1A-220ENST00000635988 S4R3C0 116 aa11.52□□□□□ -0.57
CACNA1A-220ENST00000635988 A0A1W2PRD5 423 aa11.51□□□□□ -0.57
CACNA1A-220ENST00000635988 A0A1W2PRF3 423 aa11.51□□□□□ -0.57
CACNA1A-220ENST00000635988 A0A1W2PRM7 423 aa11.51□□□□□ -0.57
CACNA1A-220ENST00000635988 E7EQL1 145 aa11.51□□□□□ -0.57
CACNA1A-220ENST00000635988 AZU1P20160 251 aa11.51□□□□□ -0.57
CACNA1A-220ENST00000635988 ZNF479Q96JC4 524 aa11.51□□□□□ -0.57
CACNA1A-220ENST00000635988 TTTY13Q9BZ97 58 aa11.51□□□□□ -0.57
CACNA1A-220ENST00000635988 NCOR1O75376 2440 aa11.51□□□□□ -0.57
CACNA1A-220ENST00000635988 F8W735 103 aaPredicted RBP11.51□□□□□ -0.57
CACNA1A-220ENST00000635988 SPANXB1Q9NS25 103 aaPredicted RBP11.51□□□□□ -0.57
CACNA1A-220ENST00000635988 A0A1B0GV72 72 aa11.5□□□□□ -0.57
CACNA1A-220ENST00000635988 B9A039 149 aa11.5□□□□□ -0.57
CACNA1A-220ENST00000635988 DTX2Q86UW9 622 aa11.5□□□□□ -0.57
CACNA1A-220ENST00000635988 TTC9CQ8N5M4 171 aa11.5□□□□□ -0.57
CACNA1A-220ENST00000635988 DEFB124Q8NES8 71 aa11.5□□□□□ -0.57
CACNA1A-220ENST00000635988 CLUHP3Q96NS8 147 aa11.5□□□□□ -0.57
CACNA1A-220ENST00000635988 PSMG3-AS1Q96PY0 264 aa11.5□□□□□ -0.57
CACNA1A-220ENST00000635988 TMEM160Q9NX00 188 aa11.5□□□□□ -0.57
CACNA1A-220ENST00000635988 IGLV2-18A0A075B6J9 118 aa11.5□□□□□ -0.57
CACNA1A-220ENST00000635988 RBAKDNA6NC62 111 aa11.5□□□□□ -0.57
CACNA1A-220ENST00000635988 GAGE12HA6NDE8 117 aa11.5□□□□□ -0.57
CACNA1A-220ENST00000635988 C5orf64Q2M2E5 130 aa11.5□□□□□ -0.57
CACNA1A-220ENST00000635988 ARPC1AQ92747 370 aa11.5□□□□□ -0.57
CACNA1A-220ENST00000635988 TRAV40A0A0B4J280 105 aa11.49□□□□□ -0.57
CACNA1A-220ENST00000635988 SPAARA0A1B0GVQ0 90 aa11.49□□□□□ -0.57
CACNA1A-220ENST00000635988 IGHG4P01861 327 aa11.49□□□□□ -0.57
CACNA1A-220ENST00000635988 PLNP26678 52 aa11.49□□□□□ -0.57
CACNA1A-220ENST00000635988 LAGE3Q14657 143 aa11.49□□□□□ -0.57
CACNA1A-220ENST00000635988 CFHR4Q92496 578 aa11.49□□□□□ -0.57
CACNA1A-220ENST00000635988 SMAD5-AS1Q9Y6J3 95 aa11.49□□□□□ -0.57
CACNA1A-220ENST00000635988 GAS8-AS1O95177 125 aa11.49□□□□□ -0.57
CACNA1A-220ENST00000635988 RAB9AP51151 201 aa11.49□□□□□ -0.57
CACNA1A-220ENST00000635988 C12orf74Q32Q52 190 aa11.49□□□□□ -0.57
CACNA1A-220ENST00000635988 GTSF1LQ9H1H1 148 aa11.49□□□□□ -0.57
CACNA1A-220ENST00000635988 ONECUT1Q9UBC0 465 aa11.49□□□□□ -0.57
CACNA1A-220ENST00000635988 A0A087WX48 190 aa11.48□□□□□ -0.57
CACNA1A-220ENST00000635988 NCBP2LA6PVI3 153 aaKnown RBP11.48□□□□□ -0.57
CACNA1A-220ENST00000635988 LINC01619G3V211 115 aa11.48□□□□□ -0.57
CACNA1A-220ENST00000635988 OR11H6Q8NGC7 330 aa11.48□□□□□ -0.57
CACNA1A-220ENST00000635988 ZNF502Q8TBZ5 544 aa11.48□□□□□ -0.57
CACNA1A-220ENST00000635988 MRPL35Q9NZE8 188 aaKnown RBP11.48□□□□□ -0.57
CACNA1A-220ENST00000635988 WFDC2Q14508 124 aa11.48□□□□□ -0.57
CACNA1A-220ENST00000635988 ZNF672Q499Z4 452 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-220ENST00000635988 SPATA25Q9BR10 227 aa11.48□□□□□ -0.57
CACNA1A-220ENST00000635988 TSSC4Q9Y5U2 329 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-220ENST00000635988 HIST1H4GQ99525 98 aa11.47□□□□□ -0.57
CACNA1A-220ENST00000635988 COLQQ9Y215 455 aaPredicted RBP11.47□□□□□ -0.57
CACNA1A-220ENST00000635988 GATA1P15976 413 aaPredicted RBP11.47□□□□□ -0.57
CACNA1A-220ENST00000635988 HES1Q14469 280 aa11.47□□□□□ -0.57
CACNA1A-220ENST00000635988 IL17RELQ6ZVW7 336 aa11.47□□□□□ -0.57
CACNA1A-220ENST00000635988 DYNAPQ8N1N2 210 aa11.47□□□□□ -0.57
CACNA1A-220ENST00000635988 LY6G5BQ8NDX9 201 aa11.47□□□□□ -0.57
CACNA1A-220ENST00000635988 CTSGP08311 255 aa11.46□□□□□ -0.57
CACNA1A-220ENST00000635988 HLA-DMBP28068 263 aa11.46□□□□□ -0.57
CACNA1A-220ENST00000635988 SMAGPQ0VAQ4 97 aa11.46□□□□□ -0.57
CACNA1A-220ENST00000635988 RRN3P1Q2M238 152 aa11.46□□□□□ -0.58
CACNA1A-220ENST00000635988 GAGE13Q4V321 117 aa11.46□□□□□ -0.58
CACNA1A-220ENST00000635988 IGFL4Q6B9Z1 124 aa11.46□□□□□ -0.58
CACNA1A-220ENST00000635988 MAPKAPK5-AS1Q8N8E1 139 aa11.46□□□□□ -0.58
CACNA1A-220ENST00000635988 ZGRF1Q86YA3 2104 aa11.46□□□□□ -0.58
CACNA1A-220ENST00000635988 TRAV12-1A0A0B4J245 112 aa11.45□□□□□ -0.58
CACNA1A-220ENST00000635988 SLC50A1Q9BRV3 221 aa11.45□□□□□ -0.58
CACNA1A-220ENST00000635988 A0A1B0GWB2 263 aa11.45□□□□□ -0.58
CACNA1A-220ENST00000635988 H3BMG7 143 aa11.45□□□□□ -0.58
CACNA1A-220ENST00000635988 ERCC8Q13216 396 aa11.45□□□□□ -0.58
CACNA1A-220ENST00000635988 NRACQ8N912 160 aa11.45□□□□□ -0.58
CACNA1A-220ENST00000635988 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.44□□□□□ -0.58
CACNA1A-220ENST00000635988 H7C1H1 209 aa11.44□□□□□ -0.58
CACNA1A-220ENST00000635988 GOSR1O95249 250 aa11.44□□□□□ -0.58
CACNA1A-220ENST00000635988 ATP6V0BQ99437 205 aa11.44□□□□□ -0.58
CACNA1A-220ENST00000635988 WDFY4Q6ZS81 3184 aa11.44□□□□□ -0.58
CACNA1A-220ENST00000635988 IGKV3D-20A0A0C4DH25 116 aa11.44□□□□□ -0.58
CACNA1A-220ENST00000635988 LYNX1G3V0Z9 82 aa11.44□□□□□ -0.58
CACNA1A-220ENST00000635988 CD3EP07766 207 aa11.44□□□□□ -0.58
CACNA1A-220ENST00000635988 LYNX1P0DP58 116 aa11.44□□□□□ -0.58
CACNA1A-220ENST00000635988 PPIFP30405 207 aaKnown RBP11.44□□□□□ -0.58
CACNA1A-220ENST00000635988 ETDBQ3ZM63 59 aa11.44□□□□□ -0.58
CACNA1A-220ENST00000635988 TRBV7-3A0A075B6L6 115 aa11.43□□□□□ -0.58
CACNA1A-220ENST00000635988 IGHV4-4A0A075B6R2 117 aa11.43□□□□□ -0.58
CACNA1A-220ENST00000635988 F8VRH5 84 aa11.43□□□□□ -0.58
CACNA1A-220ENST00000635988 IGHV3-23P01764 117 aa11.43□□□□□ -0.58
CACNA1A-220ENST00000635988 CCDC144NLQ6NUI1 221 aa11.43□□□□□ -0.58
CACNA1A-220ENST00000635988 SPAG8Q99932 426 aaPredicted RBP11.43□□□□□ -0.58
CACNA1A-220ENST00000635988 OR11H12B2RN74 326 aa11.43□□□□□ -0.58
CACNA1A-220ENST00000635988 OR11H1Q8NG94 326 aa11.43□□□□□ -0.58
CACNA1A-220ENST00000635988 OR11H2Q8NH07 326 aa11.43□□□□□ -0.58
CACNA1A-220ENST00000635988 J3KRW8 73 aa11.42□□□□□ -0.58
CACNA1A-220ENST00000635988 DEFB123Q8N688 67 aa11.42□□□□□ -0.58
CACNA1A-220ENST00000635988 MRAP2Q96G30 205 aa11.42□□□□□ -0.58
CACNA1A-220ENST00000635988 HIF1ANQ9NWT6 349 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms