RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 OR4C12Q96R67 309 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 METTL26Q96S19 204 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 ANAPC13Q9BS18 74 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 THTPAQ9BU02 230 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 HIGD2AQ9BW72 106 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 ARV1Q9H2C2 271 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 RHOFQ9HBH0 211 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 TAF9BQ9HBM6 251 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 CMC2Q9NRP2 79 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 MRPL16Q9NX20 251 aaKnown RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 DOK5Q9P104 306 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 CLEC2DQ9UHP7 191 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 RABAC1Q9UI14 185 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 ATPIF1Q9UII2 106 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 AK3Q9UIJ7 227 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 NAGKQ9UJ70 344 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 TRAPPC2LQ9UL33 140 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 TBC1D24Q9ULP9 559 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 WASHC3Q9Y3C0 194 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 AMMECR1Q9Y4X0 333 aaPredicted RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 MPC1Q9Y5U8 109 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 GMEB1Q9Y692 573 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 MINOS1-NBL1R4GNA1 71 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 TNXBP22105 4242 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 SRRM2Q9UQ35 2752 aaKnown RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 IGLV10-54A0A075B6I4 117 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 DEFB131BA0A096LNP1 70 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 IGHV6-1A0A0B4J1U7 121 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 TRAV10A0A0B4J240 114 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 NBDYA0A0U1RRE5 68 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 CENPXA8MT69 81 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 BBIP1A8MTZ0 92 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 GGTLC3B5MD39 225 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 F5H768 121 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 F6UZH7 168 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 H3BQ85 93 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 K7EIM0 57 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 SULT1C2O00338 296 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 SLC17A3O00476 420 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 GNGT2O14610 69 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 DEGS1O15121 323 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 SIVA1O15304 175 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 TGOLN2O43493 480 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 ATP8B1O43520 1251 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 DENRO43583 198 aaKnown RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 COX7A2P2O60397 106 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 MPZL2O60487 215 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 CNIH1O95406 144 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 FSTL3O95633 263 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 CYB5AP00167 134 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 IFNGP01579 166 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 IGHV3-30P01768 117 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 IGHV3-33P01772 117 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 APOA2P02652 100 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 C1QBP02746 253 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 IFNA6P05013 189 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 LIMS3P0CW19 117 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 LIMS4P0CW20 117 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 MT1HL1P0DM35 61 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 SCGB1C2P0DMR2 95 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 CGB3P0DN86 165 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 CGB7P0DN87 165 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 IGHV3-30-3P0DP02 117 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 IGHV3-30-5P0DP03 117 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 DEFB130BP0DP73 79 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 DEFB130AP0DP74 79 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 IAPPP10997 89 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 HTN1P15515 57 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 HTR2CP28335 458 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 CRABP1P29762 137 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 G6PCP35575 357 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 ZNF93P35789 620 aaPredicted RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 GUCA1AP43080 201 aaPredicted RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 MAP2K4P45985 399 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 RBP2P50120 134 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 ETV1P50549 477 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 BCAP31P51572 246 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 DYNLT3P51808 116 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 KRTAP10-4P60372 401 aaPredicted RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 TSPAN5P62079 268 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 MRPS15P82914 257 aaKnown RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 RPL18AQ02543 176 aaKnown RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 EMX1Q04741 257 aaPredicted RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 WT1-ASQ06250 92 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 TMEM267Q0VDI3 215 aaPredicted RBP0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 ST3GAL4Q11206 333 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 OR2F1Q13607 317 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 FLOT2Q14254 428 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 GPR176Q14439 515 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 FXYD3Q14802 87 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 CDK10Q15131 360 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 RSU1Q15404 277 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 KCNJ8Q15842 424 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 MOGQ16653 247 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 TMEM241Q24JQ0 296 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 DEFB114Q30KQ6 69 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 KRTAP25-1Q3LHN0 102 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 MORN2Q502X0 79 aa0.46□□□□□ -2.34
SMARCB1-209ENST00000635578 TTC32Q5I0X7 151 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms