RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 ERCC8Q13216 396 aa10.64□□□□□ -0.71
CDC42BPB-209ENST00000634889 TMEM78Q5T7P6 136 aa10.64□□□□□ -0.71
CDC42BPB-209ENST00000634889 C11orf45Q8TAV5 145 aa10.64□□□□□ -0.71
CDC42BPB-209ENST00000634889 CMTM2Q8TAZ6 248 aa10.64□□□□□ -0.71
CDC42BPB-209ENST00000634889 FAM19A4Q96LR4 140 aa10.64□□□□□ -0.71
CDC42BPB-209ENST00000634889 DNAH7Q8WXX0 4024 aa10.64□□□□□ -0.71
CDC42BPB-209ENST00000634889 TRBV7-9A0A0J9YWB2 115 aa10.63□□□□□ -0.71
CDC42BPB-209ENST00000634889 DIRC3C9JPN6 131 aa10.63□□□□□ -0.71
CDC42BPB-209ENST00000634889 NMBP08949 121 aa10.63□□□□□ -0.71
CDC42BPB-209ENST00000634889 DPPA3Q6W0C5 159 aa10.63□□□□□ -0.71
CDC42BPB-209ENST00000634889 AGPAT4-IT1Q9H0P7 198 aa10.63□□□□□ -0.71
CDC42BPB-209ENST00000634889 A0A1B0GVG6 124 aa10.62□□□□□ -0.71
CDC42BPB-209ENST00000634889 CRISP2P16562 243 aa10.62□□□□□ -0.71
CDC42BPB-209ENST00000634889 RRN3P1Q2M238 152 aa10.62□□□□□ -0.71
CDC42BPB-209ENST00000634889 GFI1BQ5VTD9 330 aa10.62□□□□□ -0.71
CDC42BPB-209ENST00000634889 ZFAND6Q6FIF0 208 aa10.62□□□□□ -0.71
CDC42BPB-209ENST00000634889 EIF5AL1Q6IS14 154 aaKnown RBP10.62□□□□□ -0.71
CDC42BPB-209ENST00000634889 VGLL1Q99990 258 aa10.62□□□□□ -0.71
CDC42BPB-209ENST00000634889 ZNF492Q9P255 531 aa10.62□□□□□ -0.71
CDC42BPB-209ENST00000634889 SERTM2A0A1B0GWG4 89 aa10.61□□□□□ -0.71
CDC42BPB-209ENST00000634889 A0A1W2PRE2 83 aa10.61□□□□□ -0.71
CDC42BPB-209ENST00000634889 MAP1LC3B2A6NCE7 125 aa10.61□□□□□ -0.71
CDC42BPB-209ENST00000634889 CXorf65A6NEN9 183 aa10.61□□□□□ -0.71
CDC42BPB-209ENST00000634889 KLLNB2CW77 178 aa10.61□□□□□ -0.71
CDC42BPB-209ENST00000634889 H7BYZ3 331 aa10.61□□□□□ -0.71
CDC42BPB-209ENST00000634889 ZNF138P52744 262 aa10.61□□□□□ -0.71
CDC42BPB-209ENST00000634889 ZFP69Q49AA0 526 aa10.61□□□□□ -0.71
CDC42BPB-209ENST00000634889 IQCF2Q8IXL9 164 aa10.61□□□□□ -0.71
CDC42BPB-209ENST00000634889 C5orf17Q8NAS9 161 aa10.61□□□□□ -0.71
CDC42BPB-209ENST00000634889 TMED6Q8WW62 240 aa10.61□□□□□ -0.71
CDC42BPB-209ENST00000634889 MAP1LC3BQ9GZQ8 125 aa10.61□□□□□ -0.71
CDC42BPB-209ENST00000634889 LENEPQ9Y5L5 61 aa10.61□□□□□ -0.71
CDC42BPB-209ENST00000634889 TEX48A0A1B0GUV7 120 aa10.6□□□□□ -0.71
CDC42BPB-209ENST00000634889 LOC102723971A0A1B0GUV8 181 aa10.6□□□□□ -0.71
CDC42BPB-209ENST00000634889 NUPR2A6NF83 97 aa10.6□□□□□ -0.71
CDC42BPB-209ENST00000634889 FHITP49789 147 aa10.6□□□□□ -0.71
CDC42BPB-209ENST00000634889 TAS2R60P59551 318 aa10.6□□□□□ -0.71
CDC42BPB-209ENST00000634889 CD300CQ08708 224 aa10.6□□□□□ -0.71
CDC42BPB-209ENST00000634889 KIR3DS1Q14943 382 aa10.6□□□□□ -0.71
CDC42BPB-209ENST00000634889 SLC51BQ86UW2 128 aa10.6□□□□□ -0.71
CDC42BPB-209ENST00000634889 LINC01587Q99440 93 aa10.6□□□□□ -0.71
CDC42BPB-209ENST00000634889 C7orf71A4D174 169 aa10.59□□□□□ -0.71
CDC42BPB-209ENST00000634889 GGTLC3B5MD39 225 aa10.59□□□□□ -0.71
CDC42BPB-209ENST00000634889 RAB5CP51148 216 aa10.59□□□□□ -0.71
CDC42BPB-209ENST00000634889 FGF8P55075 233 aaPredicted RBP10.59□□□□□ -0.71
CDC42BPB-209ENST00000634889 C9orf62Q8N4C0 152 aa10.59□□□□□ -0.71
CDC42BPB-209ENST00000634889 ZFAND2AQ8N6M9 145 aa10.59□□□□□ -0.71
CDC42BPB-209ENST00000634889 FAM213BQ8TBF2 198 aa10.59□□□□□ -0.71
CDC42BPB-209ENST00000634889 NIPSNAP3BQ9BS92 247 aa10.59□□□□□ -0.71
CDC42BPB-209ENST00000634889 NKX6-2Q9C056 277 aaPredicted RBP10.59□□□□□ -0.71
CDC42BPB-209ENST00000634889 PLA2G2EQ9NZK7 142 aa10.59□□□□□ -0.71
CDC42BPB-209ENST00000634889 RPH3ALQ9UNE2 315 aa10.59□□□□□ -0.71
CDC42BPB-209ENST00000634889 TRAV12-3A0A0B4J271 114 aa10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 ZNF705GA8MUZ8 300 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 J3KRW8 73 aa10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 K7EQM0 130 aa10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 TCRAP04437 139 aa10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 GPX1P07203 203 aa10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 SPART-AS1P0CW21 52 aa10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 NANOS2P60321 138 aaKnown RBP10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 PMS2P11Q13670 270 aa10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 GOLT1AQ6ZVE7 132 aa10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 Q8TAT8 98 aa10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 MBD3L1Q8WWY6 194 aa10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 C16orf74Q96GX8 76 aa10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 PYGO2Q9BRQ0 406 aa10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 CELA1Q9UNI1 258 aa10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 YTHDF2Q9Y5A9 579 aaKnown RBP10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 ARL2-SNX15V9GYD0 113 aa10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 CSMD3Q7Z407 3707 aa10.58□□□□□ -0.72
CDC42BPB-209ENST00000634889 C11orf94C9JXX5 98 aa10.57□□□□□ -0.72
CDC42BPB-209ENST00000634889 EMP1P54849 157 aa10.57□□□□□ -0.72
CDC42BPB-209ENST00000634889 SUMO1P63165 101 aaKnown RBP10.57□□□□□ -0.72
CDC42BPB-209ENST00000634889 GNG5P63218 68 aa10.57□□□□□ -0.72
CDC42BPB-209ENST00000634889 BTN1A1Q13410 526 aa10.57□□□□□ -0.72
CDC42BPB-209ENST00000634889 CEMP1Q6PRD7 247 aaPredicted RBP10.57□□□□□ -0.72
CDC42BPB-209ENST00000634889 ZNF493Q6ZR52 646 aa10.57□□□□□ -0.72
CDC42BPB-209ENST00000634889 SFT2D1Q8WV19 159 aa10.57□□□□□ -0.72
CDC42BPB-209ENST00000634889 PHLDA1Q8WV24 401 aaPredicted RBP10.57□□□□□ -0.72
CDC42BPB-209ENST00000634889 TMPRSS5Q9H3S3 457 aa10.57□□□□□ -0.72
CDC42BPB-209ENST00000634889 EPDR1Q9UM22 224 aa10.57□□□□□ -0.72
CDC42BPB-209ENST00000634889 FBLL1A6NHQ2 334 aaKnown RBP10.56□□□□□ -0.72
CDC42BPB-209ENST00000634889 FAM74A7A6NL05 159 aa10.56□□□□□ -0.72
CDC42BPB-209ENST00000634889 ZNF324O75467 553 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPB-209ENST00000634889 RNASE4P34096 147 aaKnown RBP10.56□□□□□ -0.72
CDC42BPB-209ENST00000634889 CYB561D1Q8N8Q1 229 aa10.56□□□□□ -0.72
CDC42BPB-209ENST00000634889 RNASE8Q8TDE3 154 aaKnown RBP10.56□□□□□ -0.72
CDC42BPB-209ENST00000634889 TMEM263Q8WUH6 116 aaKnown RBP10.56□□□□□ -0.72
CDC42BPB-209ENST00000634889 LINC00467Q9BRT7 94 aa10.56□□□□□ -0.72
CDC42BPB-209ENST00000634889 TCEAL7Q9BRU2 100 aa10.56□□□□□ -0.72
CDC42BPB-209ENST00000634889 ATG101Q9BSB4 218 aa10.56□□□□□ -0.72
CDC42BPB-209ENST00000634889 DKK2Q9UBU2 259 aa10.56□□□□□ -0.72
CDC42BPB-209ENST00000634889 PLAC8L1A1L4L8 177 aa10.55□□□□□ -0.72
CDC42BPB-209ENST00000634889 PRM2P04554 102 aa10.55□□□□□ -0.72
CDC42BPB-209ENST00000634889 H2AFB1P0C5Y9 115 aa10.55□□□□□ -0.72
CDC42BPB-209ENST00000634889 HTN1P15515 57 aa10.55□□□□□ -0.72
CDC42BPB-209ENST00000634889 AZU1P20160 251 aa10.55□□□□□ -0.72
CDC42BPB-209ENST00000634889 UBE2G2P60604 165 aa10.55□□□□□ -0.72
CDC42BPB-209ENST00000634889 PRR9Q5T870 116 aa10.55□□□□□ -0.72
CDC42BPB-209ENST00000634889 FAM222AQ5U5X8 452 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms