RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 TUBA4BQ9H853 241 aa18.66■□□□□ 0.58
CAPNS1-215ENST00000628018 LURAP1LQ8IV03 231 aa18.65■□□□□ 0.58
CAPNS1-215ENST00000628018 LINC00482Q8N8I6 264 aa18.65■□□□□ 0.58
CAPNS1-215ENST00000628018 AGPAT4-IT1Q9H0P7 198 aa18.65■□□□□ 0.58
CAPNS1-215ENST00000628018 TRAV25A0A0B4J276 109 aa18.64■□□□□ 0.58
CAPNS1-215ENST00000628018 PPP1R2P9O14990 202 aa18.64■□□□□ 0.58
CAPNS1-215ENST00000628018 SNRPD3P62318 126 aaKnown RBP18.64■□□□□ 0.58
CAPNS1-215ENST00000628018 OR10G8Q8NGN5 311 aa18.64■□□□□ 0.58
CAPNS1-215ENST00000628018 PRR25Q96S07 402 aa18.64■□□□□ 0.58
CAPNS1-215ENST00000628018 TENM1Q9UKZ4 2725 aa18.64■□□□□ 0.57
CAPNS1-215ENST00000628018 ERVFC1-1P60608 527 aa18.64■□□□□ 0.57
CAPNS1-215ENST00000628018 SAPCD1Q5SSQ6 148 aa18.64■□□□□ 0.57
CAPNS1-215ENST00000628018 COX8CQ7Z4L0 72 aa18.64■□□□□ 0.57
CAPNS1-215ENST00000628018 Q8TAT8 98 aa18.64■□□□□ 0.57
CAPNS1-215ENST00000628018 OSTCQ9NRP0 149 aa18.64■□□□□ 0.57
CAPNS1-215ENST00000628018 PPP1R14DQ9NXH3 145 aa18.64■□□□□ 0.57
CAPNS1-215ENST00000628018 WNK1Q9H4A3 2382 aa18.63■□□□□ 0.57
CAPNS1-215ENST00000628018 CXorf65A6NEN9 183 aa18.63■□□□□ 0.57
CAPNS1-215ENST00000628018 H7BYZ3 331 aa18.63■□□□□ 0.57
CAPNS1-215ENST00000628018 ZNF688P0C7X2 276 aa18.63■□□□□ 0.57
CAPNS1-215ENST00000628018 FAM231DQ6ZW35 169 aa18.63■□□□□ 0.57
CAPNS1-215ENST00000628018 RNASE7Q9H1E1 156 aaKnown RBP18.63■□□□□ 0.57
CAPNS1-215ENST00000628018 BIN3Q9NQY0 253 aa18.63■□□□□ 0.57
CAPNS1-215ENST00000628018 DEFB1P60022 68 aa18.62■□□□□ 0.57
CAPNS1-215ENST00000628018 PSMG4Q5JS54 123 aa18.62■□□□□ 0.57
CAPNS1-215ENST00000628018 IBA57Q5T440 356 aaKnown RBP18.62■□□□□ 0.57
CAPNS1-215ENST00000628018 TMEM78Q5T7P6 136 aa18.62■□□□□ 0.57
CAPNS1-215ENST00000628018 PRR27Q6MZM9 219 aa18.62■□□□□ 0.57
CAPNS1-215ENST00000628018 OR8A1Q8NGG7 326 aa18.62■□□□□ 0.57
CAPNS1-215ENST00000628018 ZC2HC1AQ96GY0 325 aa18.62■□□□□ 0.57
CAPNS1-215ENST00000628018 C8orf49Q96NF6 230 aa18.62■□□□□ 0.57
CAPNS1-215ENST00000628018 NPIPB6E9PJ23 425 aa18.61■□□□□ 0.57
CAPNS1-215ENST00000628018 SAP30O75446 220 aa18.61■□□□□ 0.57
CAPNS1-215ENST00000628018 ZNF705DP0CH99 300 aaPredicted RBP18.61■□□□□ 0.57
CAPNS1-215ENST00000628018 ZNF705BP0CI00 300 aaPredicted RBP18.61■□□□□ 0.57
CAPNS1-215ENST00000628018 ZNF138P52744 262 aa18.61■□□□□ 0.57
CAPNS1-215ENST00000628018 LINC00322Q6ZN03 302 aaPredicted RBP18.61■□□□□ 0.57
CAPNS1-215ENST00000628018 C15orf54Q8N8G6 183 aa18.61■□□□□ 0.57
CAPNS1-215ENST00000628018 OR10J6PQ8NGY7 276 aa18.61■□□□□ 0.57
CAPNS1-215ENST00000628018 SPAG8Q99932 426 aaPredicted RBP18.61■□□□□ 0.57
CAPNS1-215ENST00000628018 GPR61Q9BZJ8 451 aa18.61■□□□□ 0.57
CAPNS1-215ENST00000628018 ZNF492Q9P255 531 aa18.61■□□□□ 0.57
CAPNS1-215ENST00000628018 F6UB75 175 aa18.6■□□□□ 0.57
CAPNS1-215ENST00000628018 LINC00477Q96M19 166 aa18.6■□□□□ 0.57
CAPNS1-215ENST00000628018 ATRQ13535 2644 aa18.59■□□□□ 0.57
CAPNS1-215ENST00000628018 IZUMO1RA6ND01 250 aa18.59■□□□□ 0.57
CAPNS1-215ENST00000628018 NUDT10Q8NFP7 164 aa18.59■□□□□ 0.57
CAPNS1-215ENST00000628018 NUDT11Q96G61 164 aa18.59■□□□□ 0.57
CAPNS1-215ENST00000628018 NDFIP1Q9BT67 221 aa18.59■□□□□ 0.57
CAPNS1-215ENST00000628018 V9GYV3 84 aa18.59■□□□□ 0.57
CAPNS1-215ENST00000628018 C19orf71A6NCJ1 209 aa18.59■□□□□ 0.57
CAPNS1-215ENST00000628018 IGLV1-51P01701 117 aa18.59■□□□□ 0.57
CAPNS1-215ENST00000628018 YPEL4Q96NS1 127 aa18.59■□□□□ 0.57
CAPNS1-215ENST00000628018 ZNF747Q9BV97 191 aa18.59■□□□□ 0.57
CAPNS1-215ENST00000628018 ZNF256Q9Y2P7 627 aaPredicted RBP18.59■□□□□ 0.57
CAPNS1-215ENST00000628018 OR4C46A6NHA9 309 aa18.58■□□□□ 0.56
CAPNS1-215ENST00000628018 HIST1H1AQ02539 215 aaPredicted RBP18.58■□□□□ 0.56
CAPNS1-215ENST00000628018 LENEPQ9Y5L5 61 aa18.58■□□□□ 0.56
CAPNS1-215ENST00000628018 CRIP1P50238 77 aa18.57■□□□□ 0.56
CAPNS1-215ENST00000628018 OR2K2Q8NGT1 345 aa18.57■□□□□ 0.56
CAPNS1-215ENST00000628018 CT45A10P0DMU9 189 aa18.56■□□□□ 0.56
CAPNS1-215ENST00000628018 PFN1P07737 140 aaKnown RBP18.55■□□□□ 0.56
CAPNS1-215ENST00000628018 ELOBQ15370 118 aa18.55■□□□□ 0.56
CAPNS1-215ENST00000628018 SMUG1Q53HV7 270 aa18.55■□□□□ 0.56
CAPNS1-215ENST00000628018 GDF5OSQ5U4N7 250 aa18.55■□□□□ 0.56
CAPNS1-215ENST00000628018 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.55■□□□□ 0.56
CAPNS1-215ENST00000628018 IMMP2LQ96T52 175 aa18.55■□□□□ 0.56
CAPNS1-215ENST00000628018 URGCP-MRPS24S4R325 110 aa18.55■□□□□ 0.56
CAPNS1-215ENST00000628018 FBN1P35555 2871 aaKnown RBP18.55■□□□□ 0.56
CAPNS1-215ENST00000628018 A0A0J9YX75 114 aa18.54■□□□□ 0.56
CAPNS1-215ENST00000628018 COLCA2A8K830 154 aa18.54■□□□□ 0.56
CAPNS1-215ENST00000628018 ZNF705GA8MUZ8 300 aaPredicted RBP18.54■□□□□ 0.56
CAPNS1-215ENST00000628018 GATCO43716 136 aaKnown RBP18.54■□□□□ 0.56
CAPNS1-215ENST00000628018 DAZAP1Q96EP5 407 aaKnown RBP18.54■□□□□ 0.56
CAPNS1-215ENST00000628018 FAM19A4Q96LR4 140 aa18.54■□□□□ 0.56
CAPNS1-215ENST00000628018 SAV1Q9H4B6 383 aaPredicted RBP18.54■□□□□ 0.56
CAPNS1-215ENST00000628018 DEFB131AP59861 70 aa18.54■□□□□ 0.56
CAPNS1-215ENST00000628018 IL36BQ9NZH7 164 aa18.54■□□□□ 0.56
CAPNS1-215ENST00000628018 TRBV7-9A0A0J9YWB2 115 aa18.53■□□□□ 0.56
CAPNS1-215ENST00000628018 P01737 135 aa18.53■□□□□ 0.56
CAPNS1-215ENST00000628018 ZNF80P51504 273 aaPredicted RBP18.53■□□□□ 0.56
CAPNS1-215ENST00000628018 EBLN2Q6P2I7 272 aa18.53■□□□□ 0.56
CAPNS1-215ENST00000628018 FOXI2Q6ZQN5 318 aa18.53■□□□□ 0.56
CAPNS1-215ENST00000628018 MAP6D1Q9H9H5 199 aa18.53■□□□□ 0.56
CAPNS1-215ENST00000628018 CD33P20138 364 aa18.52■□□□□ 0.56
CAPNS1-215ENST00000628018 FAM162BQ5T6X4 162 aa18.52■□□□□ 0.56
CAPNS1-215ENST00000628018 SPATA3Q8NHX4 192 aa18.52■□□□□ 0.56
CAPNS1-215ENST00000628018 TMEM158Q8WZ71 300 aa18.52■□□□□ 0.56
CAPNS1-215ENST00000628018 S100PP25815 95 aa18.51■□□□□ 0.55
CAPNS1-215ENST00000628018 OR4B1Q8NGF8 309 aa18.51■□□□□ 0.55
CAPNS1-215ENST00000628018 RPP21Q9H633 154 aaKnown RBP18.51■□□□□ 0.55
CAPNS1-215ENST00000628018 SH2D1AO60880 128 aa18.5■□□□□ 0.55
CAPNS1-215ENST00000628018 KCNIP4Q6PIL6 250 aa18.5■□□□□ 0.55
CAPNS1-215ENST00000628018 C3orf56Q8N813 242 aa18.5■□□□□ 0.55
CAPNS1-215ENST00000628018 DUSP14O95147 198 aaKnown RBP18.49■□□□□ 0.55
CAPNS1-215ENST00000628018 CA1P00915 261 aaPredicted RBP18.49■□□□□ 0.55
CAPNS1-215ENST00000628018 CRISP2P16562 243 aa18.49■□□□□ 0.55
CAPNS1-215ENST00000628018 FAM3BP58499 235 aaPredicted RBP18.49■□□□□ 0.55
CAPNS1-215ENST00000628018 CT83Q5H943 113 aa18.49■□□□□ 0.55
CAPNS1-215ENST00000628018 C12orf54Q6X4T0 127 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms